ViewGene

Locus Name:
GeneID:
Location:

GeneID:6785
TrivialName: PA14_64250
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_64250
PAO1 Ortholog Locus:
Sequence Length:1425
Protein Length:474
Start: 5728228
Stop: 5726804
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGTTGCTCTTGTCCATGACCAGCGTGTAGCCGGATGGCGCCTTGAAGCTTTGCCCGGCCATCGCCTCGCG
AACCTTGTCGACCTCGGTGCTGCCGGCCTTTTCCACGGCCTGCGCCCACATATGGATGCCGACGTAGGTGGC
TTCCATGGGGTCGTTGGTCACCGCGGTGGCGTAGTTCGGCAGGTTCTTCGCCTTGGCGTAGGCTTTCCAGTC
GGCGACGAACTTCTCGTTGACCGGATTGCTCACCGACTCGAAGTAGTTCCATGCCGCGAGGTTGCCGACCAG
CGGCTTGGTGTCGATGCCGCGCAGTTCTTCCTCGCCTACGGAGAAGGCCACCACCGGCACCTCGGTGGCTTC
CAGGCCCTGGTTGGCCAGTTCCTTGTAGAAGGGCACGTTGGAGTCGCCATTGACGGTGGAGACCACCGCGGT
CTTGCCGCCTGCGGCGAACTTCTTGATGTCGGCGACGATGGTCTGGTAGTCGCTGTGGCCGAATGGCGTGTA
GACCTCCTGGATGTCCTTGTCGTCCACGCCCTTGCTGTGCAGGAAGGCGCGCAGGATCTTGTTGGTGGTGCG
CGGGTAGACATAGTCGGTGCCGAGCAGGAAGAAGCGCCTGGCACCGCCGCCGTCCTCGCTCATCAGGTACTC
CACCGCCGGGATCGCCTGCTGGTTCGGCGCCGCGCCGGTATAGAAGACGTTCGGCGAGAGTTCCTCGCCCTC
GTACTGGACCGGGTAGAACAGCAATCCGTTGAGTTCCTCGAATACCGGCAACACCGATTTGCGCGACACCGA
GGTCCAGCAACCGAAGACCACCGCGACCTTGTCCTGGGTCAGCAACTGGCGGGCCTTTTCCGCGAACAGCGG
CCAGTTCGACGCCGGATCGACCACCACCGCCTCCAGCTTCTTGCCGTTGACCCCGCCCTTGGCGTTGATCTC
GTCGATGGTCATCAGGGCCATGTCCTTCAGCGAGGTCTCGGAGATCGCCATGGTCCCGGACAGCGAGTGAAG
GATGCCGACCTTGATGGTTTCGGCGGCCTGGATGGACCAGGACAGGCCCATGGAAGCGATGGACGCGGACAG
CGTGAAGGCCTTGAGCAGACTGCGACGTTTCATTGGTGTTGTTCTCCATTCACCAGCGGTCGGGGCGGCAGT
TTTCAGGAGGCGTCGTGCTTGTCGTCGGGCATCCGTCCGGTGGACGGCGGGGTGCGCACTGCGGCCTGGATC
TCTTCGTCGAGGCTCCAGAGCAAAGGCTGTGCCTCTTCTTGGCGCTGGCCGGTATCGGTCGGCGAAAAGGCG
CCGCGAGTCGCCGGGGAAGCATGCCGAGCAGGCCTGGCTATGCCGGTGAAGGCGGCGTTTTCAGCGGGTTTT
CGCCGGATATCGACGGAGAAGGGGTCGTGGGTTCCGGATGGGGAGGCGTCGCGCTGA
Translation:
MVALVHDQRVAGWRLEALPGHRLANLVDLGAAGLFHGLRPHMDADVGGFHGVVGHRGGVVRQVLRLGVGFPV
GDELLVDRIAHRLEVVPCREVADQRLGVDAAQFFLAYGEGHHRHLGGFQALVGQFLVEGHVGVAIDGGDHRG
LAACGELLDVGDDGLVVAVAEWRVDLLDVLVVHALAVQEGAQDLVGGARVDIVGAEQEEAPGTAAVLAHQVL
HRRDRLLVRRRAGIEDVRREFLALVLDRVEQQSVEFLEYRQHRFARHRGPATEDHRDLVLGQQLAGLFREQR
PVRRRIDHHRLQLLAVDPALGVDLVDGHQGHVLQRGLGDRHGPGQRVKDADLDGFGGLDGPGQAHGSDGRGQ
REGLEQTATFHWCCSPFTSGRGGSFQEASCLSSGIRPVDGGVRTAAWISSSRLQSKGCASSWRWPVSVGEKA
PRVAGEACRAGLAMPVKAAFSAGFRRISTEKGSWVPDGEASR*
AnnotationID:6786GeneID:6785
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 09:09:28
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16540
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30653
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49787How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4991908Stop: 4990484
Length: 1425
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTTGCTCTTGTCCATGACCAGCGTGTAGCCGGATGGCGCCTTGAAGCTTTGCCCGGCCATCGCCTCGCG
AACCTTGTCGACCTCGGTGCTGCCGGCCTTTTCCACGGCCTGCGCCCACATATGGATGCCGACGTAGGTGGC
TTCCATGGGGTCGTTGGTCACCGCGGTGGCGTAGTTCGGCAGGTTCTTCGCCTTGGCGTAGGCTTTCCAGTC
GGCGACGAACTTCTCGTTGACCGGATTGCTCACCGACTCGAAGTAGTTCCATGCCGCGAGGTTGCCGACCAG
CGGCTTGGTGTCGATGCCGCGCAGTTCTTCCTCGCCTACGGAGAAGGCCACCACCGGCACCTCGGTGGCTTC
CAGGCCCTGGTTGGCCAGTTCCTTGTAGAAGGGCACGTTGGAGTCGCCATTGACGGTGGAGACCACCGCGGT
CTTGCCGCCTGCGGCGAACTTCTTGATGTCGGCGACGATGGTCTGGTAGTCGCTGTGGCCGAATGGCGTGTA
GACCTCCTGGATGTCCTTGTCGTCCACGCCCTTGCTGTGCAGGAAGGCGCGCAGGATCTTGTTGGTGGTGCG
CGGGTAGACATAGTCGGTGCCGAGCAGGAAGAAGCGCCTGGCACCGCCGCCGTCCTCGCTCATCAGGTACTC
CACCGCCGGGATCGCCTGCTGGTTCGGCGCCGCGCCGGTATAGAAGACGTTCGGCGAGAGTTCCTCGCCCTC
GTACTGGACCGGGTAGAACAGCAATCCGTTGAGTTCCTCGAATACCGGCAACACCGATTTGCGCGACACCGA
GGTCCAGCAACCGAAGACCACCGCGACCTTGTCCTGGGTCAGCAACTGGCGGGCCTTTTCCGCGAACAGCGG
CCAGTTCGACGCCGGATCGACCACCACCGCCTCCAGCTTCTTGCCGTTGACCCCGCCCTTGGCGTTGATCTC
GTCGATGGTCATCAGGGCCATGTCCTTCAGCGAGGTCTCGGAGATCGCCATGGTCCCGGACAGCGAGTGAAG
GATGCCGACCTTGATGGTTTCGGCGGCCTGGATGGACCAGGACAGGCCCATGGAAGCGATGGACGCGGACAG
CGTGAAGGCCTTGAGCAGACTGCGACGTTTCATTGGTGTTGTTCTCCATTCACCAGCGGTCGGGGCGGCAGT
TTTCAGGAGGCGTCGTGCTTGTCGTCGGGCATCCGTCCGGTGGACGGCGGGGTGCGCACTGCGGCCTGGATC
TCTTCGTCGAGGCTCCAGAGCAAAGGCTGTGCCTCTTCTTGGCGCTGGCCGGTATCGGTCGGCGAAAAGGCG
CCGCGAGTCGCCGGGGAAGCATGCCGAGCAGGCCTGGCTATGCCGGTGAAGGCGGCGTTTTCAGCGGGTTTT
CGCCGGATATCGACGGAGAAGGGGTCGTGGGTTCCGGATGGGGAGGCGTCGCGCTGA