ViewGene

Locus Name:
GeneID:
Location:

GeneID:6782
TrivialName: PA14_64160
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_64160
PAO1 Ortholog Locus:
Sequence Length:1497
Protein Length:498
Start: 5718151
Stop: 5716655
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGGCGTAGCGGCCCGGCGGCGACCGGCGAGGTCTTTCCGGTCACTCCGGGGAATGGAAGCTCAGGCTGTA
GTTCACCGCCTTCGGACCCGGGTCGAGGATGTCCAGCGACACGTGGATCGGTACCTGCGGTGGCATTTCCGT
TCGTCCGGCCAGCTCGCCGCCGAGGTACTCGCCGGGCTTGAAGCGGCGATTGGCGATGAGGTGGCCGTTGAG
GTCGGCGAAGCGCAGTTCCAGCAGCGGGAACGGCTGCGAGAAGCTGGCGCGGTTGTAGATGATCGCGTCGAC
CACCAGCGCGCCGCTGAATTCGGGATGGCTGCGGACCACCAGGTTGCTGCTCCTGATCTGCTCCACGTCGAC
CTTGGAGGGAAGGGTGCAGCCGATTTCCGGGCAGAGCTGGGCGAACCAGGGGCGATAGGCGTCCTGGCGCGC
CAGCTCGTCGAAATGGTAGGCGACGTACTGAGCGGCGAGACCACCCAGCGCCAGCAGGATCAGCAGCAGCCA
ACCGAGACGCCGCGGCCATTGGCGCCGGGGCTTCTCCCAGGCCAGTTGCAGCGGCTCGTCGCGCAACTGGTC
GAGACTCTCGACCGGCGCCTCGTCCGGCTTGCGGGCGCTGCCCAGGGGCGCGACGGACTGTTCCTCGGCGCT
TTCCTCGTCGTCTTCATCCAGGGCGCTCAGTCCGTGGCGGCGCTTGCCGAGGCTGGGCTCGTCGTCATCGTC
GTCATCGAGGCTGAGGCGAAGTTCCGGCGGATCCTCGGCGCGGCGCAGCGGCACGAAGGATACCCGCTCTTC
CGCCAGCGGTTCGCCGAGGCTCGGTTCCTGGCGCGGGTTGCCGCGCGCCGGCTGGGCCGGTTCGGCATCGGC
GATCAGCGCCTCGGCCCAGCGTTCGTCATGTGGATCGCGTTCGTCGTCGCGGCGCGCCAGCAGGCTTTCCGC
CGGTCGCGGGGCCTTCTCGATGCTGGAGAACTCCTGGTTCAGCTCGAATTCGTCGAGCTTGGCCAGTTCCTC
GTCGAGGTTGAGGCTGTCCAGGTCGAGGTCGTCATGGATCCACAGGGTTTCGTCGCGCGGGCGCGCTGCCGG
GGGCGCGGCCGAGGTGGCGGCCGCGACGCTGGGCGCGGGTGGCGGAGCGGCGGCCGGCTTCGCTTCGGCTGC
CGAAGGAGCGTTCGCGCGCGGCGCGCCACCGACCTGGTGTTGCAGGGCGTTGAAGACTTTCAGGCAGGTGCC
GCAGCGGACCGCGCCATTGGCGGCGCCCAGTTGCGCGTCGTTGACGCGGAAACTGGTGCTGCAATGGGGACA
TTGGGTGATGACGCTTTCGCTCATGCGGCGATCCGTAGGAAAAATCCGGCGGCTAGTCTACCCCAAGCTTCT
TGCACGAAGGCAGTGGGGCGGGATCAGTGGTGGCTGGCGGTGCGCCATCAATCGGCGCGGCGGCGGCCGCTG
ATGCGGATCCAGCCTTCGCGCTCGGCGGTCGGGTCGAGATCGAAGTGTGCGGAGTAG
Translation:
MGVAARRRPARSFRSLRGMEAQAVVHRLRTRVEDVQRHVDRYLRWHFRSSGQLAAEVLAGLEAAIGDEVAVE
VGEAQFQQRERLREAGAVVDDRVDHQRAAEFGMAADHQVAAPDLLHVDLGGKGAADFRAELGEPGAIGVLAR
QLVEMVGDVLSGETTQRQQDQQQPTETPRPLAPGLLPGQLQRLVAQLVETLDRRLVRLAGAAQGRDGLFLGA
FLVVFIQGAQSVAALAEAGLVVIVVIEAEAKFRRILGAAQRHEGYPLFRQRFAEARFLARVAARRLGRFGIG
DQRLGPAFVMWIAFVVAARQQAFRRSRGLLDAGELLVQLEFVELGQFLVEVEAVQVEVVMDPQGFVARARCR
GRGRGGGRDAGRGWRSGGRLRFGCRRSVRARRATDLVLQGVEDFQAGAAADRAIGGAQLRVVDAETGAAMGT
LGDDAFAHAAIRRKNPAASLPQASCTKAVGRDQWWLAVRHQSARRRPLMRIQPSRSAVGSRSKCAE*
AnnotationID:6783GeneID:6782
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 07:07:35
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16536
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30648
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49784How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4981831Stop: 4980335
Length: 1497
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGCGTAGCGGCCCGGCGGCGACCGGCGAGGTCTTTCCGGTCACTCCGGGGAATGGAAGCTCAGGCTGTA
GTTCACCGCCTTCGGACCCGGGTCGAGGATGTCCAGCGACACGTGGATCGGTACCTGCGGTGGCATTTCCGT
TCGTCCGGCCAGCTCGCCGCCGAGGTACTCGCCGGGCTTGAAGCGGCGATTGGCGATGAGGTGGCCGTTGAG
GTCGGCGAAGCGCAGTTCCAGCAGCGGGAACGGCTGCGAGAAGCTGGCGCGGTTGTAGATGATCGCGTCGAC
CACCAGCGCGCCGCTGAATTCGGGATGGCTGCGGACCACCAGGTTGCTGCTCCTGATCTGCTCCACGTCGAC
CTTGGAGGGAAGGGTGCAGCCGATTTCCGGGCAGAGCTGGGCGAACCAGGGGCGATAGGCGTCCTGGCGCGC
CAGCTCGTCGAAATGGTAGGCGACGTACTGAGCGGCGAGACCACCCAGCGCCAGCAGGATCAGCAGCAGCCA
ACCGAGACGCCGCGGCCATTGGCGCCGGGGCTTCTCCCAGGCCAGTTGCAGCGGCTCGTCGCGCAACTGGTC
GAGACTCTCGACCGGCGCCTCGTCCGGCTTGCGGGCGCTGCCCAGGGGCGCGACGGACTGTTCCTCGGCGCT
TTCCTCGTCGTCTTCATCCAGGGCGCTCAGTCCGTGGCGGCGCTTGCCGAGGCTGGGCTCGTCGTCATCGTC
GTCATCGAGGCTGAGGCGAAGTTCCGGCGGATCCTCGGCGCGGCGCAGCGGCACGAAGGATACCCGCTCTTC
CGCCAGCGGTTCGCCGAGGCTCGGTTCCTGGCGCGGGTTGCCGCGCGCCGGCTGGGCCGGTTCGGCATCGGC
GATCAGCGCCTCGGCCCAGCGTTCGTCATGTGGATCGCGTTCGTCGTCGCGGCGCGCCAGCAGGCTTTCCGC
CGGTCGCGGGGCCTTCTCGATGCTGGAGAACTCCTGGTTCAGCTCGAATTCGTCGAGCTTGGCCAGTTCCTC
GTCGAGGTTGAGGCTGTCCAGGTCGAGGTCGTCATGGATCCACAGGGTTTCGTCGCGCGGGCGCGCTGCCGG
GGGCGCGGCCGAGGTGGCGGCCGCGACGCTGGGCGCGGGTGGCGGAGCGGCGGCCGGCTTCGCTTCGGCTGC
CGAAGGAGCGTTCGCGCGCGGCGCGCCACCGACCTGGTGTTGCAGGGCGTTGAAGACTTTCAGGCAGGTGCC
GCAGCGGACCGCGCCATTGGCGGCGCCCAGTTGCGCGTCGTTGACGCGGAAACTGGTGCTGCAATGGGGACA
TTGGGTGATGACGCTTTCGCTCATGCGGCGATCCGTAGGAAAAATCCGGCGGCTAGTCTACCCCAAGCTTCT
TGCACGAAGGCAGTGGGGCGGGATCAGTGGTGGCTGGCGGTGCGCCATCAATCGGCGCGGCGGCGGCCGCTG
ATGCGGATCCAGCCTTCGCGCTCGGCGGTCGGGTCGAGATCGAAGTGTGCGGAGTAG