ViewGene

Locus Name:
GeneID:
Location:

GeneID:6778
TrivialName: PA14_64040
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_64040
PAO1 Ortholog Locus:
Sequence Length:1998
Protein Length:665
Start: 5708314
Stop: 5706317
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 161/657 (24%), Positives = 229/657 (34%), Gaps = 188/657 (28%)
Sequence:
GTGCTTGGCCCGGTACAGCGCTTCGTCGGCCTGCTTGGCCATGCTCTTGATATCGAGGTCCGGGGTCAGCTC
GGCGATGCCGCAACTGAAGGTGCAGCGCAGGTCGGTCGGTTGCGCCGGGTAGTGGATCTCGGCGAAGCGCTG
GCGAATCTCGTCGAGCACCAGGCGCGCGGCGTCCAGATCGGTGTCCGGAAGGACCACGGCGAACTCCTCGCC
GCCATAGCGGCCGATGTGGTCGGTCTTGCGCAGGCGCTGCTTGAGAAACAGCGCCAGGCCCTTGATCACCCG
GTCGCCCATGGGGTGGCCGAAACGGTCGTTGACCTGCTTGAAGTGGTCGATGTCGAGCATCGCGAAGCTCAG
CGGACGGCCATCGCGACGCGCGCGCAGGCGGGCGTCCTCGAGCAGTTGCAGGGTATGGGTGTGGTTGTACAG
GCCGGTCAGGCTGTCGCGCACCATCCGCGCCTTCAGGCTGCGCGCGCGGCTGGCGCGGGTGCGCACGGTGGC
GATCAGGTGGCGCGGGCGGATCGGCTTGGTGAGGAAGTCGTCGCCGCCTTCGCTCATGGCGTCCAGCTGCTT
GTCCAGGTCGTCCTCGGCGGACAGGTAGATGATCGGCACGCTGACGTGGCGTTCGTGCTGGCGGATCACCTT
GGCCAACTCGGTGCCCAGGCACTCGGGCATGTACATGTCGAGGATGATCAGGTCGGGCTGGAAGTCGCTCAG
CTCGGCCATCACCGACAGCGGCTCGGTGAGCGCGCGGGTGATGATCCCGGCGCTGTTGAGGACCATCTCGGT
GTGCAGCGCCTGGGCCCGGGAGTCGTCGACGATCAGTACCCGGTAGGGTTCGTAGAAGCTCAGGCGGCTGAG
GGTCTCGATCTTTTCCAGCACGCTGGAGGCGTCCAGGGTGCCGGTGAAGAATTCCTGGCCGCCGGCGCGGGC
TGCGGCCAGGCGGGTCGGGGTGTCGGTCTCGCTGTCGCTGAAGAACAGCACCGGCAGCTTGTGTTCGAGGCC
GGCCTGGGCCTCGCTGGCCAGTCGCAGGCCCATGTCGGGGCCGGCGAAGTCGACTTCCATGACGATCGCCGC
CGGGTAGCGTTCGCGCATGCTGGCGCGGAAGGCGTCGGCGGTCTCGCAGCTCAGCGCCTGCAGACCGAAGAA
CTCCAGTTGCTGGGCCAGGCGCTCGGCGCGTTCGCGGTCCTTCAGTGCCAGGTAGACCGGTTTGCGCAATGG
CGGCAGGACGGTGTGCTCGAGCTGGTCGCCATGCCGCAGGCCGGTGCGCGACAGGCGCTGCATCAACTGGTT
GAGTTCGCTGATCGACTCGCTGGAAAGCCGGCCGCGGTTGGCCTCGACGACGTCCAGGGTACGGTCGATGGC
ACCGGCCAGCTGGGCATGCTCGGCTTGCTCGAAGCGTTCGGCGTAGCGCTGCAGGCGCAGGGTGGCGTCGGC
CAGTTCTTCCATGCCGTCGCTGTTCCACTCCGCGCGGGTCAGGCGTTGCCAGACCTCCAGAACCTGGCGCGC
CTGGTTGATCACTCGCTGGGCGAAGTGGTGCTTCAGGCGGTCCAGGGTCGGGTCATCGTGCTCGGTCATCAT
GACGCGCTTCTTTCGTGGTCTTCGCGGCAGAGCGTCGCTGCGAATGATGGCTCTATGCTATCACCTATCGCC
ATGAAAGCCAGCGGCCGTTGGGCGGCTGACGAGAGGAGCCTTTTCTTTTCCAAATGTCATCCCCACCTGTTG
GTGGGTGCCTTTGTGCGACGGACTACGGCATGCTTATGCCTGTTTCGGAAAATTCTCACTGAGCATTCCGGC
ACAAAACCGGCTTCCACTACGCTGAAAGCCGACGATGCCGAGGTTTTCGGCGTCCTGGAAGGGTTGGCGCTT
GGCACGGAACGCGTTCGCCATGGTCCAATCCCCCATCTATCGAGCTGTTTTAAGGACCCTTGCCATGCTGGA
CTGGAAGAAGCGTCGTGGGACCATGCGCGATCGCGTGGACAATTCCGTGGATGA
Translation:
MLGPVQRFVGLLGHALDIEVRGQLGDAATEGAAQVGRLRRVVDLGEALANLVEHQARGVQIGVRKDHGELLA
AIAADVVGLAQALLEKQRQALDHPVAHGVAETVVDLLEVVDVEHREAQRTAIATRAQAGVLEQLQGMGVVVQ
AGQAVAHHPRLQAARAAGAGAHGGDQVARADRLGEEVVAAFAHGVQLLVQVVLGGQVDDRHADVAFVLADHL
GQLGAQALGHVHVEDDQVGLEVAQLGHHRQRLGERAGDDPGAVEDHLGVQRLGPGVVDDQYPVGFVEAQAAE
GLDLFQHAGGVQGAGEEFLAAGAGCGQAGRGVGLAVAEEQHRQLVFEAGLGLAGQSQAHVGAGEVDFHDDRR
RVAFAHAGAEGVGGLAAQRLQTEELQLLGQALGAFAVLQCQVDRFAQWRQDGVLELVAMPQAGARQALHQLV
EFADRLAGKPAAVGLDDVQGTVDGTGQLGMLGLLEAFGVALQAQGGVGQFFHAVAVPLRAGQALPDLQNLAR
LVDHSLGEVVLQAVQGRVIVLGHHDALLSWSSRQSVAANDGSMLSPIAMKASGRWAADERSLFFSKCHPHLL
VGAFVRRTTACLCLFRKILTEHSGTKPASTTLKADDAEVFGVLEGLALGTERVRHGPIPHLSSCFKDPCHAG
LEEASWDHARSRGQFRG*
AnnotationID:6779GeneID:6778
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 07:07:17
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16529
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30640
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49780How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4971994Stop: 4969997
Length: 1998
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCTTGGCCCGGTACAGCGCTTCGTCGGCCTGCTTGGCCATGCTCTTGATATCGAGGTCCGGGGTCAGCTC
GGCGATGCCGCAACTGAAGGTGCAGCGCAGGTCGGTCGGTTGCGCCGGGTAGTGGATCTCGGCGAAGCGCTG
GCGAATCTCGTCGAGCACCAGGCGCGCGGCGTCCAGATCGGTGTCCGGAAGGACCACGGCGAACTCCTCGCC
GCCATAGCGGCCGATGTGGTCGGTCTTGCGCAGGCGCTGCTTGAGAAACAGCGCCAGGCCCTTGATCACCCG
GTCGCCCATGGGGTGGCCGAAACGGTCGTTGACCTGCTTGAAGTGGTCGATGTCGAGCATCGCGAAGCTCAG
CGGACGGCCATCGCGACGCGCGCGCAGGCGGGCGTCCTCGAGCAGTTGCAGGGTATGGGTGTGGTTGTACAG
GCCGGTCAGGCTGTCGCGCACCATCCGCGCCTTCAGGCTGCGCGCGCGGCTGGCGCGGGTGCGCACGGTGGC
GATCAGGTGGCGCGGGCGGATCGGCTTGGTGAGGAAGTCGTCGCCGCCTTCGCTCATGGCGTCCAGCTGCTT
GTCCAGGTCGTCCTCGGCGGACAGGTAGATGATCGGCACGCTGACGTGGCGTTCGTGCTGGCGGATCACCTT
GGCCAACTCGGTGCCCAGGCACTCGGGCATGTACATGTCGAGGATGATCAGGTCGGGCTGGAAGTCGCTCAG
CTCGGCCATCACCGACAGCGGCTCGGTGAGCGCGCGGGTGATGATCCCGGCGCTGTTGAGGACCATCTCGGT
GTGCAGCGCCTGGGCCCGGGAGTCGTCGACGATCAGTACCCGGTAGGGTTCGTAGAAGCTCAGGCGGCTGAG
GGTCTCGATCTTTTCCAGCACGCTGGAGGCGTCCAGGGTGCCGGTGAAGAATTCCTGGCCGCCGGCGCGGGC
TGCGGCCAGGCGGGTCGGGGTGTCGGTCTCGCTGTCGCTGAAGAACAGCACCGGCAGCTTGTGTTCGAGGCC
GGCCTGGGCCTCGCTGGCCAGTCGCAGGCCCATGTCGGGGCCGGCGAAGTCGACTTCCATGACGATCGCCGC
CGGGTAGCGTTCGCGCATGCTGGCGCGGAAGGCGTCGGCGGTCTCGCAGCTCAGCGCCTGCAGACCGAAGAA
CTCCAGTTGCTGGGCCAGGCGCTCGGCGCGTTCGCGGTCCTTCAGTGCCAGGTAGACCGGTTTGCGCAATGG
CGGCAGGACGGTGTGCTCGAGCTGGTCGCCATGCCGCAGGCCGGTGCGCGACAGGCGCTGCATCAACTGGTT
GAGTTCGCTGATCGACTCGCTGGAAAGCCGGCCGCGGTTGGCCTCGACGACGTCCAGGGTACGGTCGATGGC
ACCGGCCAGCTGGGCATGCTCGGCTTGCTCGAAGCGTTCGGCGTAGCGCTGCAGGCGCAGGGTGGCGTCGGC
CAGTTCTTCCATGCCGTCGCTGTTCCACTCCGCGCGGGTCAGGCGTTGCCAGACCTCCAGAACCTGGCGCGC
CTGGTTGATCACTCGCTGGGCGAAGTGGTGCTTCAGGCGGTCCAGGGTCGGGTCATCGTGCTCGGTCATCAT
GACGCGCTTCTTTCGTGGTCTTCGCGGCAGAGCGTCGCTGCGAATGATGGCTCTATGCTATCACCTATCGCC
ATGAAAGCCAGCGGCCGTTGGGCGGCTGACGAGAGGAGCCTTTTCTTTTCCAAATGTCATCCCCACCTGTTG
GTGGGTGCCTTTGTGCGACGGACTACGGCATGCTTATGCCTGTTTCGGAAAATTCTCACTGAGCATTCCGGC
ACAAAACCGGCTTCCACTACGCTGAAAGCCGACGATGCCGAGGTTTTCGGCGTCCTGGAAGGGTTGGCGCTT
GGCACGGAACGCGTTCGCCATGGTCCAATCCCCCATCTATCGAGCTGTTTTAAGGACCCTTGCCATGCTGGA
CTGGAAGAAGCGTCGTGGGACCATGCGCGATCGCGTGGACAATTCCGTGGATGA