ViewGene
Locus Name:
GeneID:
Location:

GeneID:6773
TrivialName: PA14_63870
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63870
PAO1 Ortholog Locus:
Sequence Length:546
Protein Length:181
Start: 5693655
Stop: 5693110
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08457.1|AE004920_7 (AE004920) probable chemotaxis transducer [Pseudomonas aeruginosa PAO1]
Identities = 47/171 (27%), Positives = 65/171 (38%), Gaps = 21/171 (12%)
Sequence:
TTGCGACAGCGCCTCATCCTGCACGCTGCGCGACAGTTGCAGCGCGCCGACCAGCGAAGCGAGCAGCAGCAC
GGCGCGCTCGCCTGCGTCCTCGCCCTCCAGGGCCGCTTCGATCATCGCCAGGCGCTTGCGCACGATGCTGTC
GGTGGTCGGGCTCGGCGTGCCGCGCTGGCCGAGTTCCGCCGACAGGGTAGGCAACGGGCAGCCGGCGCCGGG
GTTATCGCGGTGACGCGGCGACAGGTACTGCTCTATCAGCAGCGCCAGCGGTCGTTCCGCCTCCGCCAGGGG
CGCGGTGACTTCGTCGAGTTGCGCCGCGGCATGCCGCAACGCGGTTTCCACCAGGTCGTCCTTGGACTTGAA
GTGCGCGTAGAAGCCGCCGTGGGTCAGGCCCAGGGCTTTCATCAGCGGTTGCAGCCCGGTGGCGCCGACGCC
GTCCTGGCGGAACAGCCGGGCAGCCTCCTCGACGATACGCCGGCGGGTCTTCTGCTTGTGGTCTTCGGGATA
ACGCATGGCTTCGATACCTTGGAATGCAGGTCGTCATCTTAA
Translation:
MRQRLILHAARQLQRADQRSEQQHGALACVLALQGRFDHRQALAHDAVGGRARRAALAEFRRQGRQRAAGAG
VIAVTRRQVLLYQQRQRSFRLRQGRGDFVELRRGMPQRGFHQVVLGLEVRVEAAVGQAQGFHQRLQPGGADA
VLAEQPGSLLDDTPAGLLLVVFGITHGFDTLECRSSS*
AnnotationID:6774GeneID:6773
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 07:07:48
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16525




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30630




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49775How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4957335Stop: 4956790

          
Length: 546


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCGACAGCGCCTCATCCTGCACGCTGCGCGACAGTTGCAGCGCGCCGACCAGCGAAGCGAGCAGCAGCAC 
GGCGCGCTCGCCTGCGTCCTCGCCCTCCAGGGCCGCTTCGATCATCGCCAGGCGCTTGCGCACGATGCTGTC 
GGTGGTCGGGCTCGGCGTGCCGCGCTGGCCGAGTTCCGCCGACAGGGTAGGCAACGGGCAGCCGGCGCCGGG 
GTTATCGCGGTGACGCGGCGACAGGTACTGCTCTATCAGCAGCGCCAGCGGTCGTTCCGCCTCCGCCAGGGG 
CGCGGTGACTTCGTCGAGTTGCGCCGCGGCATGCCGCAACGCGGTTTCCACCAGGTCGTCCTTGGACTTGAA 
GTGCGCGTAGAAGCCGCCGTGGGTCAGGCCCAGGGCTTTCATCAGCGGTTGCAGCCCGGTGGCGCCGACGCC 
GTCCTGGCGGAACAGCCGGGCAGCCTCCTCGACGATACGCCGGCGGGTCTTCTGCTTGTGGTCTTCGGGATA 
ACGCATGGCTTCGATACCTTGGAATGCAGGTCGTCATCTTAA