ViewGene

Locus Name:
GeneID:
Location:

GeneID:6766
TrivialName: PA14_63630
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63630
PAO1 Ortholog Locus:
Sequence Length:2952
Protein Length:983
Start: 5676860
Stop: 5673909
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 174/679 (25%), Positives = 223/679 (32%), Gaps = 134/679 (19%)
Sequence:
TTGCGTTGCTGTTCGAGATTGATCCGGCCGTCGCCGAGAGTGCGGGAAAAGGACATACGATCTCCTCTGCAG
CCTTGTCCGCCATCAGGCCTGGAGTCGCATGCGCGATACGTGGGGTGGATCGCCTGGGCGCTGCCCTTTCCG
CGGACGGGAGGCGTGGAGAACGCCGAGGCCGACTATAGGCCGGCCGACGCGTCCGCGGCAAGACGCACTCAG
CCCTTGCGGATCATCCAGATGCCGGCGCCGATCAGTGCCAACCCGCCCAGTTTCAGCGCGCTGATCGGTGCC
TCGCGGAAGCCGGCCCAACCGAAGTGGTCGAGGCTCACGGCCATGCCCAACTGGCCGGCGAGCACCAGCACC
ATGAACATCAGCGCGCCGATGCGCGGCGCGGCGAAGGCGGCGATGAAGATGAAGAACATGCCGAGGAAACCG
CCGCACCAGTGCCACCAGCTCAGCCCGCGCAATGCCGCCAGGCCGGGAAACTCGCGCTGCGAGAGGGTCAGG
GCGAGCAACCCGAGGGTGCCGACGAAGAACGAGATCAGTGCCGCGGCGAGGACGCTGGACACCTGCTTGGCC
AACTGGCCGTTGATCCCCGCCTGCAGCGGCAGGCAGGCGCCGGCGAGCAGGGGCAGGACGAACAGCCACCAG
GGGGGAGTGGGCATGCAAGACTCCTGGAACGATGACGGCGAGCGCGTCCCGCGCATGGCGAGGGACGGGCCG
GAGTGGTACGGGGAGTCGCACAGTATGCACCAAGCGGGGGCGGGGGAGGAAAACGCGAGGCCCCATCGCACG
CCCTCGGATTCCGCCCGGCGGGTAATCGCGAGCGGTTGTTCGCCCTACGGCCGCCATGCCGCCAACGGCGTT
ATCCCCCTACAAGCGCGCCGCCAGCATGGCCCCCTCGCGAATTGCCCGCTTGGCATCCAGTTCCCCCGCCAC
CCGCGCCCCGCCGATCAGGTGGAAGCGCAGGCTTTCCGCCGCCTGGCTGATCTGCAACTCGCGCAGCGGCTC
CTGGCCGGCGCAGATCACCACGTTCTCCACCTCCAGCCAGCGTTCCTCGCCGTCGACGCGGATCAACAAGCC
GCGTTCGTCGATCTTCAGGTACTCCACCCCGCCGAGCATGCGCACGGCGTTGTGCCTGAGGTGCGCGCGGTG
CACCCAGCCGCTGGTCTTGCCGAGCTGCGCGCCGGGGGCGCCGGGCTTGCGCTGGAGCAGCCAGACCTGGCG
CGCCGGCTGCGTCGGAGCGGGTTCGCGGAGGCCGCCGGGCTGGCTGTTGTCGAGGTCCACGCCCCATTCCGC
GAGCCATTCGCCGAGCGCCCGCGGCTGGCCGTCGCTGGGTGCGGCGACGAGGAAGGCGGCGACGTCGAAGCC
GATGCCGCCGGCGCCGACGATGGCGACCCGCGCGCCCACCGGCGCGCCGCGCAGCACGTCCACGTAGCTGAG
TACGGTCGGTCCGCCGATGCCGTCGATCCTTGGCCGGCGTGGCTGGATGCCGGTGGCCACCACCACGTCGTC
GAACTGACCGTCCAGCTCGCCCTGGCGCACCCGGTGGCCGAGGCGCAGGTCGACGCCGAGGCGTTCCAGGCG
CACGCGGAAGTAGCGCAGGGTTTCGCGGAACTCTTCCTTGCCGGGAATCCGCTTGGCCAGGTTGAACTGCCC
GCCGATTTCCCCGCTCGCCTCGAACAGGCTGACCCGATGCCCGCGCTCGGCGGCCACGCAGGCGGCGGAGAG
CCCGGCGGGGCCGGCGCCGATCACCGCGATGCGCTTCTGCGTGCGCGCCTTGCGGTAGCGCAACTCGGTCTC
GAAGGCCGCCCGCGGGTTGACCAGGCAGGTGGCGCGGCGGTTGGCGAAGGCATGATCGAGGCAGGCCTGGTT
GCAGGCGATGCAGGTGTTGATCTCCTCGGCCCGGCCGGCACCGGCCTTGGCCACGAACTGCGGGTCGGCCAG
CAACGGCCGGGCCATCGATACCAGGTCGGCCTTGCCGGCGGCGAGCAGGGATTCGGCGACCTCCGGGGTGTT
GATCCGGTTGCTGGCGATCACCGGCACCTTCAGTTCGTGGCGCAGCCGTGCGCTGACCTCGGCGAAGGCCGC
GCGCGGCACCGAGGTGACGATGGTCGGCACGCGCGACTCGTGCCAGCCGATACCGGTGTTGAGCAGGGTGAT
GCCGGCTTCCTCCAGGGCCAGGGCGATGCGCCGTACTTCGTCCCAGGTATTGCCGCCCTCGACCAGGTCGAG
CAGCGACAGGCGATAGCAGAGGATGAAGCGTTCGCCGACGATCCGCCGGATGCCGCGGACGATCTCCAGCGC
CAGGCGCATGCGGTTTTCCAGCGGGCCGCCCCACTGGTCGTCGCGGCGGTTGGTGCGCGGGCAGAGGAACTG
GTTGAGCAGGTAGCCTTCGCTGCCCATCACTTCCACGCCGTCGTAGGCGGCGGCCTTGGCCAGCCGCGCGCA
ACGGACGAAGGCGCGGATGGTCTTGCGGATGCCACGCTCGGAGAGTTCGCGCGGGGTGAACCAACTGATCGG
CGACTTCAACGGCGAGGCGGACACCGCCATCGGGTGGTAGCCATAGCGCCCGGCGTGGAGGATCTGCAGCAG
GATCTTGCCGCCCTCGGCATGCACCGCCTGGGTCAGGCGACGATGGGCGGGCACCTCCAGGGCGCTGGTGAG
GCTGCTGCCGAAGGGCAGCAGCCAACCTTCGCGGCAGGGCGCGAAGCCGCCGGTGACGATCAGCCCGGCGCC
GCCCCGGGCGCGCTCGCGGTAGTAGGCAGCGAGCTTGCCGAAGTCCCACAGACGATCCTCCAGCCCGGTGTG
CATCGAACCCATCACCACGCGGTTGCGCAGACGGGTGAAGCCCAGGTCCAGCGGGGCCAGCAGGTGCGGATA
GGGAGCGGCGGCGAGCGGCGGGTAGGGGTTGCGCATGGCGCGGTTCCGGTAGCCAGGGACGCTTCACCATAG
Translation:
MRCCSRLIRPSPRVREKDIRSPLQPCPPSGLESHARYVGWIAWALPFPRTGGVENAEADYRPADASAARRTQ
PLRIIQMPAPISANPPSFSALIGASRKPAQPKWSRLTAMPNWPASTSTMNISAPMRGAAKAAMKMKNMPRKP
PHQCHQLSPRNAARPGNSRCERVRASNPRVPTKNEISAAARTLDTCLANWPLIPACSGRQAPASRGRTNSHQ
GGVGMQDSWNDDGERVPRMARDGPEWYGESHSMHQAGAGEENARPHRTPSDSARRVIASGCSPYGRHAANGV
IPLQARRQHGPLANCPLGIQFPRHPRPADQVEAQAFRRLADLQLAQRLLAGADHHVLHLQPAFLAVDADQQA
AFVDLQVLHPAEHAHGVVPEVRAVHPAAGLAELRAGGAGLALEQPDLARRLRRSGFAEAAGLAVVEVHAPFR
EPFAERPRLAVAGCGDEEGGDVEADAAGADDGDPRAHRRAAQHVHVAEYGRSADAVDPWPAWLDAGGHHHVV
ELTVQLALAHPVAEAQVDAEAFQAHAEVAQGFAELFLAGNPLGQVELPADFPARLEQADPMPALGGHAGGGE
PGGAGADHRDALLRARLAVAQLGLEGRPRVDQAGGAAVGEGMIEAGLVAGDAGVDLLGPAGTGLGHELRVGQ
QRPGHRYQVGLAGGEQGFGDLRGVDPVAGDHRHLQFVAQPCADLGEGRARHRGDDGRHARLVPADTGVEQGD
AGFLQGQGDAPYFVPGIAALDQVEQRQAIAEDEAFADDPPDAADDLQRQAHAVFQRAAPLVVAAVGARAEEL
VEQVAFAAHHFHAVVGGGLGQPRATDEGADGLADATLGEFARGEPTDRRLQRRGGHRHRVVAIAPGVEDLQQ
DLAALGMHRLGQATMGGHLQGAGEAAAEGQQPTFAAGREAAGDDQPGAAPGALAVVGSELAEVPQTILQPGV
HRTHHHAVAQTGEAQVQRGQQVRIGSGGERRVGVAHGAVPVARDASP*
AnnotationID:6767GeneID:6766
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 06:06:04
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16521
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30616
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49768How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4940540Stop: 4937589
Length: 2952
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGTTGCTGTTCGAGATTGATCCGGCCGTCGCCGAGAGTGCGGGAAAAGGACATACGATCTCCTCTGCAG
CCTTGTCCGCCATCAGGCCTGGAGTCGCATGCGCGATACGTGGGGTGGATCGCCTGGGCGCTGCCCTTTCCG
CGGACGGGAGGCGTGGAGAACGCCGAGGCCGACTATAGGCCGGCCGACGCGTCCGCGGCAAGACGCACTCAG
CCCTTGCGGATCATCCAGATGCCGGCGCCGATCAGTGCCAACCCGCCCAGTTTCAGCGCGCTGATCGGTGCC
TCGCGGAAGCCGGCCCAACCGAAGTGGTCGAGGCTCACGGCCATGCCCAACTGGCCGGCGAGCACCAGCACC
ATGAACATCAGCGCGCCGATGCGCGGCGCGGCGAAGGCGGCGATGAAGATGAAGAACATGCCGAGGAAACCG
CCGCACCAGTGCCACCAGCTCAGCCCGCGCAATGCCGCCAGGCCGGGAAACTCGCGCTGCGAGAGGGTCAGG
GCGAGCAACCCGAGGGTGCCGACGAAGAACGAGATCAGTGCCGCGGCGAGGACGCTGGACACCTGCTTGGCC
AACTGGCCGTTGATCCCCGCCTGCAGCGGCAGGCAGGCGCCGGCGAGCAGGGGCAGGACGAACAGCCACCAG
GGGGGAGTGGGCATGCAAGACTCCTGGAACGATGACGGCGAGCGCGTCCCGCGCATGGCGAGGGACGGGCCG
GAGTGGTACGGGGAGTCGCACAGTATGCACCAAGCGGGGGCGGGGGAGGAAAACGCGAGGCCCCATCGCACG
CCCTCGGATTCCGCCCGGCGGGTAATCGCGAGCGGTTGTTCGCCCTACGGCCGCCATGCCGCCAACGGCGTT
ATCCCCCTACAAGCGCGCCGCCAGCATGGCCCCCTCGCGAATTGCCCGCTTGGCATCCAGTTCCCCCGCCAC
CCGCGCCCCGCCGATCAGGTGGAAGCGCAGGCTTTCCGCCGCCTGGCTGATCTGCAACTCGCGCAGCGGCTC
CTGGCCGGCGCAGATCACCACGTTCTCCACCTCCAGCCAGCGTTCCTCGCCGTCGACGCGGATCAACAAGCC
GCGTTCGTCGATCTTCAGGTACTCCACCCCGCCGAGCATGCGCACGGCGTTGTGCCTGAGGTGCGCGCGGTG
CACCCAGCCGCTGGTCTTGCCGAGCTGCGCGCCGGGGGCGCCGGGCTTGCGCTGGAGCAGCCAGACCTGGCG
CGCCGGCTGCGTCGGAGCGGGTTCGCGGAGGCCGCCGGGCTGGCTGTTGTCGAGGTCCACGCCCCATTCCGC
GAGCCATTCGCCGAGCGCCCGCGGCTGGCCGTCGCTGGGTGCGGCGACGAGGAAGGCGGCGACGTCGAAGCC
GATGCCGCCGGCGCCGACGATGGCGACCCGCGCGCCCACCGGCGCGCCGCGCAGCACGTCCACGTAGCTGAG
TACGGTCGGTCCGCCGATGCCGTCGATCCTTGGCCGGCGTGGCTGGATGCCGGTGGCCACCACCACGTCGTC
GAACTGACCGTCCAGCTCGCCCTGGCGCACCCGGTGGCCGAGGCGCAGGTCGACGCCGAGGCGTTCCAGGCG
CACGCGGAAGTAGCGCAGGGTTTCGCGGAACTCTTCCTTGCCGGGAATCCGCTTGGCCAGGTTGAACTGCCC
GCCGATTTCCCCGCTCGCCTCGAACAGGCTGACCCGATGCCCGCGCTCGGCGGCCACGCAGGCGGCGGAGAG
CCCGGCGGGGCCGGCGCCGATCACCGCGATGCGCTTCTGCGTGCGCGCCTTGCGGTAGCGCAACTCGGTCTC
GAAGGCCGCCCGCGGGTTGACCAGGCAGGTGGCGCGGCGGTTGGCGAAGGCATGATCGAGGCAGGCCTGGTT
GCAGGCGATGCAGGTGTTGATCTCCTCGGCCCGGCCGGCACCGGCCTTGGCCACGAACTGCGGGTCGGCCAG
CAACGGCCGGGCCATCGATACCAGGTCGGCCTTGCCGGCGGCGAGCAGGGATTCGGCGACCTCCGGGGTGTT
GATCCGGTTGCTGGCGATCACCGGCACCTTCAGTTCGTGGCGCAGCCGTGCGCTGACCTCGGCGAAGGCCGC
GCGCGGCACCGAGGTGACGATGGTCGGCACGCGCGACTCGTGCCAGCCGATACCGGTGTTGAGCAGGGTGAT
GCCGGCTTCCTCCAGGGCCAGGGCGATGCGCCGTACTTCGTCCCAGGTATTGCCGCCCTCGACCAGGTCGAG
CAGCGACAGGCGATAGCAGAGGATGAAGCGTTCGCCGACGATCCGCCGGATGCCGCGGACGATCTCCAGCGC
CAGGCGCATGCGGTTTTCCAGCGGGCCGCCCCACTGGTCGTCGCGGCGGTTGGTGCGCGGGCAGAGGAACTG
GTTGAGCAGGTAGCCTTCGCTGCCCATCACTTCCACGCCGTCGTAGGCGGCGGCCTTGGCCAGCCGCGCGCA
ACGGACGAAGGCGCGGATGGTCTTGCGGATGCCACGCTCGGAGAGTTCGCGCGGGGTGAACCAACTGATCGG
CGACTTCAACGGCGAGGCGGACACCGCCATCGGGTGGTAGCCATAGCGCCCGGCGTGGAGGATCTGCAGCAG
GATCTTGCCGCCCTCGGCATGCACCGCCTGGGTCAGGCGACGATGGGCGGGCACCTCCAGGGCGCTGGTGAG
GCTGCTGCCGAAGGGCAGCAGCCAACCTTCGCGGCAGGGCGCGAAGCCGCCGGTGACGATCAGCCCGGCGCC
GCCCCGGGCGCGCTCGCGGTAGTAGGCAGCGAGCTTGCCGAAGTCCCACAGACGATCCTCCAGCCCGGTGTG
CATCGAACCCATCACCACGCGGTTGCGCAGACGGGTGAAGCCCAGGTCCAGCGGGGCCAGCAGGTGCGGATA
GGGAGCGGCGGCGAGCGGCGGGTAGGGGTTGCGCATGGCGCGGTTCCGGTAGCCAGGGACGCTTCACCATAG