ViewGene

Locus Name:
GeneID:
Location:

GeneID:6765
TrivialName: PA14_63600
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63600
PAO1 Ortholog Locus:
Sequence Length:3024
Protein Length:1007
Start: 5669391
Stop: 5672414
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN83274.1|AE016770_74 (AE016770) Hypothetical protein [Escherichia coli CFT073]
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Sequence:
GTGGATCGGGATGCCGACGTGGTGCACGGTCTTGCCGTCCACCTGCAGCGGGCGGATGCGCTTGGTCACCAC
CGCCACCGCCTTGATGTAGCCGCGGTTGGAGGAGACCTTGACCTTGTCGCCGGCATTGATGCCCAGCTCCTT
GGCCAGCGCCTCGCCGATCTCGACGAACTGCTCGGGCTGGGTGATCGCATTCAGCCGGCAGTGCTTGGTCCA
GTAGTGGAAGTGCTCGGTGAGCCGGTAGGTGGTCGCTGCGTAGGGGAACTCGTCGGCCGTGCCGAACAGTTC
CATGTCGTTCTTGAACACCCGTGCCGCCGGGTTGCTGATCGCCTTGCGGTTGTCGCGGTGCAAGGGGTTCAC
CCCGATCGGCGTCTCGAACGGCTCGTAGTGCTCGGGGAACGGGCCTTCGGCCATCTTGTCGACGGCGAACAG
GCGGGCCACCCCTTCGGGGTTCATGATGAACGGGTTCATCCCGGCTTCCGGCGGTACGTCGGCCTTGTAGTC
GGGCACGTCGGTGCCGCCCCAGGACTTGCCGTTCCACCACACCAGGCGCTTCTTCTCCGGGTCCCACGGCTT
GCCGCTGACGTCGGCCGAGGCGCGGTTGTAGAGAATCCGCCGGTTCGCCGGCCAGGCCCAGGCCCAGCCGAG
GGTCTGGCCCATGCCGTAGGGGTCGCTGTTGTCGCGGCGGCCCATCTGGTTGCCCTGCTGGGTCCAGGAGCC
GGCGAAGATCCAGCAGCCGCTCGCCGTGCTGCCGTCGTCGCGCAGCAGGGCGAAGCCCGGCAACTGCTCGCC
GGCCTTGGCCAGGATCATGCCGTTGGCCGGGTCGACCAGGTCGCTCAGGGCCTTGCCGTTGAACTCCCGGGC
CAGTTCGTCCGGGCCCGGTTCGTCGGGCTTGAGGTAGGACCAGTCGAGGCCGAGGATCGGGTCGGGGAAGGC
CCCGCCGTCCTTGCGGTACATCTCGCGCAGGCGGTGGAACAGCCCGGCCATGATGGCGATGTCCGGACGCGC
CTGGCCCGGCGGCTCGGCGCCCTTCCAGTGCCACTGCAACCAGCGGCCGCTGTTGACGATCGAGCCGTCTTC
CTCGGCGAAGCAGGAGGTGGGCAGGCGGAACACCGTGGTCTTGATGCTGGCGGTGTCGACGTCGTTGTACTC
GCCGACGTTGCGCCAGAACTCCGAGGTCTCGGTCACCAGCGGGTCCATCACCACCATCCACTTCAGGCGCGC
CAGCGCAGCGCCGACCTTGGCCTTGTTAGGGAACGAGGCGATGGGGTTGAAGCCCTGGCAGAAGTATCCGTT
GACCTTGCCCTGGTACATCATGTCGAAGTAGCGCAGCACGTCGTAGCCGGCGCCCGGCATGTCGAGCTTGGG
CAGCCAGTCGTAGCACCAGTTGTTTTCCTTGGTCGCCGACTTGCCGAACCAGGCCTTCATCAGGCTGACATG
GAACTTGCCGTAGTTCTGCCAGTAGGACAGTTGTCCCGGGCGCAGCGGCTTGGCCGTGCGCTTGGCGATGTA
GGCGTCGTAGTCCTGCTCGGCGTCCATCGCCAGGGTCAGGTAGCCCGGCAGCGAGTTGGACAGCAGGCCGAG
GTCGGTCAGGCCCTGGATGTTGGAGTGGCCGCGCAGGGCGTTCATGCCGCCGCCGGGCATGCCGATGTTGCC
CAGCAGCAGCTGGACCATCGCGCCGGTGCGGATCATCTGCGCGCCTACCGAGTGCTGGGTCCAGCCCAGGGC
GTACATGATGGTCATGACCTTGCCCGGCTTGGAGGTCTCGGCGATTTCCGCCCAGACCTTGAGCATCATGTC
CTTCGGCGTACCGCAGATGTTGCTCACCACGTCCGGGGTGTAGCGGCTGTAGTGCTGCTTGAGCAGGTTGAA
CACGCAGCGCGGGTGAGTCAGGGTCGGGTCGACCTTGGCATAGCCGTCCTCACCGATCTCGTAGCCCCAGGA
GGACTTGTCCGGGTAGGTCCGCTTCTCGGCGTCGTAGCCGTTGAACAGGCCGTCCTCGAAGCTGAAGCCTTC
CTTCACGATGAACGAGACATCGGTGTAGTTGCGCACGTATTCGTGCTGGATCTTGTCGTTTTCCAGCAGGTA
GTTGATCAGGCCGCCGAGGAAGGCGATGTCGGTGCCGGTCCGGATCGGCGCGTAGTAGTCGGCGACCGAGGC
GGAACGGGTGAAACGCGGATCGACCACCAGCAGCCGCGCCTTGTTGTGCGCCTTGGCTTCGGTGACCCATTT
GAATCCGCACGGGTGGGCTTCGGCGGCGTTGCCGCCCATGATCAGCACCAGATCGGCATTCTTGATGTCGGT
CCAGTGGTTGGTCATGGCTCCACGGCCAAACGTCGGGGCAAGACTTGCCACCGTCGGGCCGTGTCAGACACG
CGCCTGGTTGTCGAATCCCAGGATGCCGAGGGAGCGCATCACCTTGTGGGTGATGTAGCCGGCCTCGTTGGA
CGAGGCGGACGCGGCGAGGAAGCCGGTGGTCAACCAGCGGTTGACGGTCTGGCCCTGCTCGTTCTTCTCGAC
GAAGTTGGCATCGCGGTCTTCCTTCATCAGCTTGGCGATGCGCTCGAGGGCTTCGTCCCACTCGATGCGCTT
CCACTCGCTGGAGCCGGCCTCGCGCACTTCCGGATACTTCAGGCGGTTCGGGCTGTGGATGTAGTCCAGCAG
GCCGGCGCCTTTCGGGCAGAGGGTGCCGCGGTTGACCGGATGGTCGGCGTCGCCCTCGATATGGATGATGTT
CTGCGCGACGTTCTTGGCGCCGTCGCCCTGGCTGTACATGATCAGGCCGCAACCGACCGAACAGTAGGTACA
GGTGTTGCGGGTCTCGACCGTGTGCGCCAGCTTGAAGTGGCGGACCTGGTCGGCGAAGGCCTCCGTGGGGGC
CATCCCGAGCGCCGCAAGGCTCGATCCTCCAAGGCCTATACCGCAGACCTTGAAGAATTGCCGACGGTTCAT
ATCCATCGTGCATCTCCTGCATCAGGCAAAGGACACCCGGGACATGGCCGGATGTCTCTGGTTAAAAGATAG
Translation:
MDRDADVVHGLAVHLQRADALGHHRHRLDVAAVGGDLDLVAGIDAQLLGQRLADLDELLGLGDRIQPAVLGP
VVEVLGEPVGGRCVGELVGRAEQFHVVLEHPCRRVADRLAVVAVQGVHPDRRLERLVVLGERAFGHLVDGEQ
AGHPFGVHDERVHPGFRRYVGLVVGHVGAAPGLAVPPHQALLLRVPRLAADVGRGAVVENPPVRRPGPGPAE
GLAHAVGVAVVAAAHLVALLGPGAGEDPAAARRAAVVAQQGEARQLLAGLGQDHAVGRVDQVAQGLAVELPG
QFVRARFVGLEVGPVEAEDRVGEGPAVLAVHLAQAVEQPGHDGDVRTRLARRLGALPVPLQPAAAVDDRAVF
LGEAGGGQAEHRGLDAGGVDVVVLADVAPELRGLGHQRVHHHHPLQARQRSADLGLVRERGDGVEALAEVSV
DLALVHHVEVAQHVVAGARHVELGQPVVAPVVFLGRRLAEPGLHQADMELAVVLPVGQLSRAQRLGRALGDV
GVVVLLGVHRQGQVARQRVGQQAEVGQALDVGVAAQGVHAAAGHADVAQQQLDHRAGADHLRAYRVLGPAQG
VHDGHDLARLGGLGDFRPDLEHHVLRRTADVAHHVRGVAAVVLLEQVEHAARVSQGRVDLGIAVLTDLVAPG
GLVRVGPLLGVVAVEQAVLEAEAFLHDERDIGVVAHVFVLDLVVFQQVVDQAAEEGDVGAGPDRRVVVGDRG
GTGETRIDHQQPRLVVRLGFGDPFESARVGFGGVAAHDQHQIGILDVGPVVGHGSTAKRRGKTCHRRAVSDT
RLVVESQDAEGAHHLVGDVAGLVGRGGRGEEAGGQPAVDGLALLVLLDEVGIAVFLHQLGDALEGFVPLDAL
PLAGAGLAHFRILQAVRAVDVVQQAGAFRAEGAAVDRMVGVALDMDDVLRDVLGAVALAVHDQAATDRTVGT
GVAGLDRVRQLEVADLVGEGLRGGHPERRKARSSKAYTADLEELPTVHIHRASPASGKGHPGHGRMSLVKR*
AnnotationID:6766GeneID:6765
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 06:06:41
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16519
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30614
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49767How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4933071Stop: 4936094
Length: 3024
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGATCGGGATGCCGACGTGGTGCACGGTCTTGCCGTCCACCTGCAGCGGGCGGATGCGCTTGGTCACCAC
CGCCACCGCCTTGATGTAGCCGCGGTTGGAGGAGACCTTGACCTTGTCGCCGGCATTGATGCCCAGCTCCTT
GGCCAGCGCCTCGCCGATCTCGACGAACTGCTCGGGCTGGGTGATCGCATTCAGCCGGCAGTGCTTGGTCCA
GTAGTGGAAGTGCTCGGTGAGCCGGTAGGTGGTCGCTGCGTAGGGGAACTCGTCGGCCGTGCCGAACAGTTC
CATGTCGTTCTTGAACACCCGTGCCGCCGGGTTGCTGATCGCCTTGCGGTTGTCGCGGTGCAAGGGGTTCAC
CCCGATCGGCGTCTCGAACGGCTCGTAGTGCTCGGGGAACGGGCCTTCGGCCATCTTGTCGACGGCGAACAG
GCGGGCCACCCCTTCGGGGTTCATGATGAACGGGTTCATCCCGGCTTCCGGCGGTACGTCGGCCTTGTAGTC
GGGCACGTCGGTGCCGCCCCAGGACTTGCCGTTCCACCACACCAGGCGCTTCTTCTCCGGGTCCCACGGCTT
GCCGCTGACGTCGGCCGAGGCGCGGTTGTAGAGAATCCGCCGGTTCGCCGGCCAGGCCCAGGCCCAGCCGAG
GGTCTGGCCCATGCCGTAGGGGTCGCTGTTGTCGCGGCGGCCCATCTGGTTGCCCTGCTGGGTCCAGGAGCC
GGCGAAGATCCAGCAGCCGCTCGCCGTGCTGCCGTCGTCGCGCAGCAGGGCGAAGCCCGGCAACTGCTCGCC
GGCCTTGGCCAGGATCATGCCGTTGGCCGGGTCGACCAGGTCGCTCAGGGCCTTGCCGTTGAACTCCCGGGC
CAGTTCGTCCGGGCCCGGTTCGTCGGGCTTGAGGTAGGACCAGTCGAGGCCGAGGATCGGGTCGGGGAAGGC
CCCGCCGTCCTTGCGGTACATCTCGCGCAGGCGGTGGAACAGCCCGGCCATGATGGCGATGTCCGGACGCGC
CTGGCCCGGCGGCTCGGCGCCCTTCCAGTGCCACTGCAACCAGCGGCCGCTGTTGACGATCGAGCCGTCTTC
CTCGGCGAAGCAGGAGGTGGGCAGGCGGAACACCGTGGTCTTGATGCTGGCGGTGTCGACGTCGTTGTACTC
GCCGACGTTGCGCCAGAACTCCGAGGTCTCGGTCACCAGCGGGTCCATCACCACCATCCACTTCAGGCGCGC
CAGCGCAGCGCCGACCTTGGCCTTGTTAGGGAACGAGGCGATGGGGTTGAAGCCCTGGCAGAAGTATCCGTT
GACCTTGCCCTGGTACATCATGTCGAAGTAGCGCAGCACGTCGTAGCCGGCGCCCGGCATGTCGAGCTTGGG
CAGCCAGTCGTAGCACCAGTTGTTTTCCTTGGTCGCCGACTTGCCGAACCAGGCCTTCATCAGGCTGACATG
GAACTTGCCGTAGTTCTGCCAGTAGGACAGTTGTCCCGGGCGCAGCGGCTTGGCCGTGCGCTTGGCGATGTA
GGCGTCGTAGTCCTGCTCGGCGTCCATCGCCAGGGTCAGGTAGCCCGGCAGCGAGTTGGACAGCAGGCCGAG
GTCGGTCAGGCCCTGGATGTTGGAGTGGCCGCGCAGGGCGTTCATGCCGCCGCCGGGCATGCCGATGTTGCC
CAGCAGCAGCTGGACCATCGCGCCGGTGCGGATCATCTGCGCGCCTACCGAGTGCTGGGTCCAGCCCAGGGC
GTACATGATGGTCATGACCTTGCCCGGCTTGGAGGTCTCGGCGATTTCCGCCCAGACCTTGAGCATCATGTC
CTTCGGCGTACCGCAGATGTTGCTCACCACGTCCGGGGTGTAGCGGCTGTAGTGCTGCTTGAGCAGGTTGAA
CACGCAGCGCGGGTGAGTCAGGGTCGGGTCGACCTTGGCATAGCCGTCCTCACCGATCTCGTAGCCCCAGGA
GGACTTGTCCGGGTAGGTCCGCTTCTCGGCGTCGTAGCCGTTGAACAGGCCGTCCTCGAAGCTGAAGCCTTC
CTTCACGATGAACGAGACATCGGTGTAGTTGCGCACGTATTCGTGCTGGATCTTGTCGTTTTCCAGCAGGTA
GTTGATCAGGCCGCCGAGGAAGGCGATGTCGGTGCCGGTCCGGATCGGCGCGTAGTAGTCGGCGACCGAGGC
GGAACGGGTGAAACGCGGATCGACCACCAGCAGCCGCGCCTTGTTGTGCGCCTTGGCTTCGGTGACCCATTT
GAATCCGCACGGGTGGGCTTCGGCGGCGTTGCCGCCCATGATCAGCACCAGATCGGCATTCTTGATGTCGGT
CCAGTGGTTGGTCATGGCTCCACGGCCAAACGTCGGGGCAAGACTTGCCACCGTCGGGCCGTGTCAGACACG
CGCCTGGTTGTCGAATCCCAGGATGCCGAGGGAGCGCATCACCTTGTGGGTGATGTAGCCGGCCTCGTTGGA
CGAGGCGGACGCGGCGAGGAAGCCGGTGGTCAACCAGCGGTTGACGGTCTGGCCCTGCTCGTTCTTCTCGAC
GAAGTTGGCATCGCGGTCTTCCTTCATCAGCTTGGCGATGCGCTCGAGGGCTTCGTCCCACTCGATGCGCTT
CCACTCGCTGGAGCCGGCCTCGCGCACTTCCGGATACTTCAGGCGGTTCGGGCTGTGGATGTAGTCCAGCAG
GCCGGCGCCTTTCGGGCAGAGGGTGCCGCGGTTGACCGGATGGTCGGCGTCGCCCTCGATATGGATGATGTT
CTGCGCGACGTTCTTGGCGCCGTCGCCCTGGCTGTACATGATCAGGCCGCAACCGACCGAACAGTAGGTACA
GGTGTTGCGGGTCTCGACCGTGTGCGCCAGCTTGAAGTGGCGGACCTGGTCGGCGAAGGCCTCCGTGGGGGC
CATCCCGAGCGCCGCAAGGCTCGATCCTCCAAGGCCTATACCGCAGACCTTGAAGAATTGCCGACGGTTCAT
ATCCATCGTGCATCTCCTGCATCAGGCAAAGGACACCCGGGACATGGCCGGATGTCTCTGGTTAAAAGATAG