ViewGene
Locus Name:
GeneID:
Location:

GeneID:6753
TrivialName: PA14_63140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63140
PAO1 Ortholog Locus:
Sequence Length:945
Protein Length:314
Start: 5636573
Stop: 5635629
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGACCTCGATGGCGTTGCTCTCGACGTCGCCGCTCCAGCCGTAGAGGCTCTGCTCCAGTTGGTTGCGCGA
GAGCACCTTGCCGCTGTTCTCCAGCAGCAGGCGCAGCAGCGCGTATTCGCGCGGCGCCAGTTCCACCGCCTG
GCCGGACAGGGTCACCTGGTGGGTCGCCGGGTCCAGGCGCAGCTCGCCGTGCACCAGTTGCGGCAGGGCGCG
ACCGGTGGTGCGGCGGGTCAGGGCGCGCACCCGTGCCTGCAGTTCGTCGAGATCGAAGGGCTTGGTCAGGTA
GTCGTCGGCACCGCTGTCGAGCCCGGCGACCCGGTCGGCCACCTTGTCCCGCGCGGTGAGCAGCAGCACCGG
GGTGAGCAGGCCCTGGTGACGCAGGTTGCGCAGGATGTCCAGGCCGCTGCGGCGCGGCAGGCCGATGTCGAG
CACCAGCAGGTCGAACTCGTCGGTGACCAGCGCGTTCTCCGCGGCCACGCCGTCGGTCACCCATTCCACGGT
ATCGCCTTCCAGGCGCAGCCCGGCGCGGATGCCGTCGCCGAGCAGCAGGTCGTCCTCGGCCAGCAGTATTCT
CATGGCAGCCTCGTTTCAGTGATTCCACAATTCCCACAGGCTCAGGCCGGCCTCCAGCAGGAGGATGGCGAC
GATCAGCCATTCGACCCGCAGTTCGCCCCGGAAGTAACGGTATTCACCGAGGCGGTCGGCGGCCAATTCGTA
GAGGTCCTGCAGCACTTCGATGCGGTCGTCCAGGGTCGCCAGGCGATCGTGCACTTCGGCCTGCATGGCCAG
TTCGTTGTAGAGCCGGCGCACAGCGCTGTTCAGTTGCAGCGGCGGCTTCTCCAGGTGCGACTCCAGGCGGGC
GTAGGCCATGCGCCAGAGTGTAGTGCGTCGTACCTGCCGGTTCACATGTTCCTGGCGCCGCAGGGCGGCACG
GCGCGGTAG
Translation:
MDLDGVALDVAAPAVEALLQLVAREHLAAVLQQQAQQRVFARRQFHRLAGQGHLVGRRVQAQLAVHQLRQGA
TGGAAGQGAHPCLQFVEIEGLGQVVVGTAVEPGDPVGHLVPRGEQQHRGEQALVTQVAQDVQAAAARQADVE
HQQVELVGDQRVLRGHAVGHPFHGIAFQAQPGADAVAEQQVVLGQQYSHGSLVSVIPQFPQAQAGLQQEDGD
DQPFDPQFAPEVTVFTEAVGGQFVEVLQHFDAVVQGRQAIVHFGLHGQFVVEPAHSAVQLQRRLLQVRLQAG
VGHAPECSASYLPVHMFLAPQGGTAR*
AnnotationID:6754GeneID:6753
AnnotatorUID: diggins
Modification Date/Time: 2005-03-09 12:12:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13239




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30591




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49755How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4900253Stop: 4899309

          
Length: 945


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGACCTCGATGGCGTTGCTCTCGACGTCGCCGCTCCAGCCGTAGAGGCTCTGCTCCAGTTGGTTGCGCGA 
GAGCACCTTGCCGCTGTTCTCCAGCAGCAGGCGCAGCAGCGCGTATTCGCGCGGCGCCAGTTCCACCGCCTG 
GCCGGACAGGGTCACCTGGTGGGTCGCCGGGTCCAGGCGCAGCTCGCCGTGCACCAGTTGCGGCAGGGCGCG 
ACCGGTGGTGCGGCGGGTCAGGGCGCGCACCCGTGCCTGCAGTTCGTCGAGATCGAAGGGCTTGGTCAGGTA 
GTCGTCGGCACCGCTGTCGAGCCCGGCGACCCGGTCGGCCACCTTGTCCCGCGCGGTGAGCAGCAGCACCGG 
GGTGAGCAGGCCCTGGTGACGCAGGTTGCGCAGGATGTCCAGGCCGCTGCGGCGCGGCAGGCCGATGTCGAG 
CACCAGCAGGTCGAACTCGTCGGTGACCAGCGCGTTCTCCGCGGCCACGCCGTCGGTCACCCATTCCACGGT 
ATCGCCTTCCAGGCGCAGCCCGGCGCGGATGCCGTCGCCGAGCAGCAGGTCGTCCTCGGCCAGCAGTATTCT 
CATGGCAGCCTCGTTTCAGTGATTCCACAATTCCCACAGGCTCAGGCCGGCCTCCAGCAGGAGGATGGCGAC 
GATCAGCCATTCGACCCGCAGTTCGCCCCGGAAGTAACGGTATTCACCGAGGCGGTCGGCGGCCAATTCGTA 
GAGGTCCTGCAGCACTTCGATGCGGTCGTCCAGGGTCGCCAGGCGATCGTGCACTTCGGCCTGCATGGCCAG 
TTCGTTGTAGAGCCGGCGCACAGCGCTGTTCAGTTGCAGCGGCGGCTTCTCCAGGTGCGACTCCAGGCGGGC 
GTAGGCCATGCGCCAGAGTGTAGTGCGTCGTACCTGCCGGTTCACATGTTCCTGGCGCCGCAGGGCGGCACG 
GCGCGGTAG