ViewGene

Locus Name:
GeneID:
Location:

GeneID:6751
TrivialName: PA14_62950
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_62950
PAO1 Ortholog Locus:
Sequence Length:1518
Protein Length:505
Start: 5617126
Stop: 5618643
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGGTGATCTCCACGCGCTCGCCCTCGGCGGCGAACAGCACGGTGTGGTCGCCCACCACGTCGCCGGCGCG
CACGGTGGCGAAGCCGATGGTTTCCCGCGCCCGCGCGCCGGTCTGCCCCTCACGTCCGTAGACCGCCACTTC
CTGGAGGTCCCGGCCGAGCGCCTGGGCTACCACCTCGCCCATGCGCAAGGCGGTGCCGGACGGTGCATCGAC
CTTGTGCCGGTGATGGGCCTCGATGATCTCGATATCCACTTCGTCGCCCAGCACCCGTGCCGCGGTATCCAG
AAGCTTCAGGCAAAGGTTCACGCCGACGCTGAAGTTGGCAGCGAAGACGATCGGGATATCCTTCGCCGCTTC
GGCCAGCAGCAGCTTCTCGTCGGCGCTGAAGCCGGTGGTGCCGATGACCATCGCGCGGCGCGCCTTGCGGCA
CTGCTCGATGTTCTTCAGGGTTACGGAGGGATGGGTGAAGTCGATCAGGACGTCGAACTCCTCGCAGACCTT
GCCCAGGTCCCCGGACAGCGGCACGCCGATCCGGCCGAGACCGGCCAGCTCGCCGGCGTCCGCCCCCACCAG
GGTGCTATCCGGACGATCCACCGCCGCCGTCAGCCCGGCGGCACCGCCGGTCTGCTGAACGGCCTCGATCAG
GTTCTTGCCCATGCGCCCGGCGGCGCCCACTACGGCTATACGTCGCATAAAACCACTCCACGCGGAACCCGG
ACGCGGCTGTCAGGCCGCGCCCATGGCTTTGTTTATAGGTCGTCGAAGAAACGCTTCATGCCCTCGAACCAG
CCACTGGCCTTGGGCGAATGCGAGGTGTCGCTCTGCAACGACTTGCGGAACTCCTCGAGCAGCTCGCGCTGG
CGCTTGTCCAGGTTCACCGGGGTTTCCACCACCACCTTGCACATCAGGTCGCCGGCGCCGCCGCCGCGCACC
GGGGCCACGCCCTTGCCGCGCAGGCGGAACAGCTTGCCGGTCTGGGTGCTTTCCGGAATCTTCAGCTTGACC
CGGCCATCCAGGGTCGGCACTTCCAGCTCGCCGCCCAGCGCAGCGTCGGCGAAACTGATCGGCACTTCGCAG
TACAGATGCTTGCCGTCACGCTGGAAGATCGGGTGCTCGCGCACATTGACCACCACGTACAGGTCGCCCGCC
GGACCACCCATGCTGCCGGCCTCGCCTTCGCCGGTGAGGCGGATGCGGTCGCCGGTGTCGACGCCGGCCGGC
ACCTTCACCGACAGGGTCTTCTGCTCTTCCACGCGCCCCTGGCCATGGCAGGAGCCACAGGGATCGGAAATC
ATCTTGCCGGTGCCGTGGCAGCGCGGGCAGGTCTGCTGGACCGAGAAGAAGCCCTGCTGCATGCGCACCTGG
CCGATACCGCCGCAAGTGGTGCAGGTGACAGGTGTGGTGCCGGGCTTGGCGCCGCTGCCGTTGCAAGTCTTG
CAACCGACCAGGGTCGGCACGCGGATGGTGACGGTGGTGCCGCGTACCGCCTCTTCCAGGTCGAGATCCAGG
GTGTAG
Translation:
MGDLHALALGGEQHGVVAHHVAGAHGGEADGFPRPRAGLPLTSVDRHFLEVPAERLGYHLAHAQGGAGRCID
LVPVMGLDDLDIHFVAQHPCRGIQKLQAKVHADAEVGSEDDRDILRRFGQQQLLVGAEAGGADDHRAARLAA
LLDVLQGYGGMGEVDQDVELLADLAQVPGQRHADPAETGQLAGVRPHQGAIRTIHRRRQPGGTAGLLNGLDQ
VLAHAPGGAHYGYTSHKTTPRGTRTRLSGRAHGFVYRSSKKRFMPSNQPLALGECEVSLCNDLRNSSSSSRW
RLSRFTGVSTTTLHIRSPAPPPRTGATPLPRRRNSLPVWVLSGIFSLTRPSRVGTSSSPPSAASAKLIGTSQ
YRCLPSRWKIGCSRTLTTTYRSPAGPPMLPASPSPVRRMRSPVSTPAGTFTDRVFCSSTRPWPWQEPQGSEI
ILPVPWQRGQVCWTEKKPCCMRTWPIPPQVVQVTGVVPGLAPLPLQVLQPTRVGTRMVTVVPRTASSRSRSR
V*
AnnotationID:6752GeneID:6751
AnnotatorUID: diggins
Modification Date/Time: 2005-03-09 09:09:45
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16506
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30587
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49753How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4880806Stop: 4882323
Length: 1518
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGTGATCTCCACGCGCTCGCCCTCGGCGGCGAACAGCACGGTGTGGTCGCCCACCACGTCGCCGGCGCG
CACGGTGGCGAAGCCGATGGTTTCCCGCGCCCGCGCGCCGGTCTGCCCCTCACGTCCGTAGACCGCCACTTC
CTGGAGGTCCCGGCCGAGCGCCTGGGCTACCACCTCGCCCATGCGCAAGGCGGTGCCGGACGGTGCATCGAC
CTTGTGCCGGTGATGGGCCTCGATGATCTCGATATCCACTTCGTCGCCCAGCACCCGTGCCGCGGTATCCAG
AAGCTTCAGGCAAAGGTTCACGCCGACGCTGAAGTTGGCAGCGAAGACGATCGGGATATCCTTCGCCGCTTC
GGCCAGCAGCAGCTTCTCGTCGGCGCTGAAGCCGGTGGTGCCGATGACCATCGCGCGGCGCGCCTTGCGGCA
CTGCTCGATGTTCTTCAGGGTTACGGAGGGATGGGTGAAGTCGATCAGGACGTCGAACTCCTCGCAGACCTT
GCCCAGGTCCCCGGACAGCGGCACGCCGATCCGGCCGAGACCGGCCAGCTCGCCGGCGTCCGCCCCCACCAG
GGTGCTATCCGGACGATCCACCGCCGCCGTCAGCCCGGCGGCACCGCCGGTCTGCTGAACGGCCTCGATCAG
GTTCTTGCCCATGCGCCCGGCGGCGCCCACTACGGCTATACGTCGCATAAAACCACTCCACGCGGAACCCGG
ACGCGGCTGTCAGGCCGCGCCCATGGCTTTGTTTATAGGTCGTCGAAGAAACGCTTCATGCCCTCGAACCAG
CCACTGGCCTTGGGCGAATGCGAGGTGTCGCTCTGCAACGACTTGCGGAACTCCTCGAGCAGCTCGCGCTGG
CGCTTGTCCAGGTTCACCGGGGTTTCCACCACCACCTTGCACATCAGGTCGCCGGCGCCGCCGCCGCGCACC
GGGGCCACGCCCTTGCCGCGCAGGCGGAACAGCTTGCCGGTCTGGGTGCTTTCCGGAATCTTCAGCTTGACC
CGGCCATCCAGGGTCGGCACTTCCAGCTCGCCGCCCAGCGCAGCGTCGGCGAAACTGATCGGCACTTCGCAG
TACAGATGCTTGCCGTCACGCTGGAAGATCGGGTGCTCGCGCACATTGACCACCACGTACAGGTCGCCCGCC
GGACCACCCATGCTGCCGGCCTCGCCTTCGCCGGTGAGGCGGATGCGGTCGCCGGTGTCGACGCCGGCCGGC
ACCTTCACCGACAGGGTCTTCTGCTCTTCCACGCGCCCCTGGCCATGGCAGGAGCCACAGGGATCGGAAATC
ATCTTGCCGGTGCCGTGGCAGCGCGGGCAGGTCTGCTGGACCGAGAAGAAGCCCTGCTGCATGCGCACCTGG
CCGATACCGCCGCAAGTGGTGCAGGTGACAGGTGTGGTGCCGGGCTTGGCGCCGCTGCCGTTGCAAGTCTTG
CAACCGACCAGGGTCGGCACGCGGATGGTGACGGTGGTGCCGCGTACCGCCTCTTCCAGGTCGAGATCCAGG
GTGTAG