ViewGene

Locus Name:
GeneID:
Location:

GeneID:6750
TrivialName: PA14_62820
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_62820
PAO1 Ortholog Locus:
Sequence Length:1362
Protein Length:453
Start: 5604549
Stop: 5605910
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCCGAAGCACCTGCACCGAAAGAAGCCCCTGCATCCGCACCCTTGCCATGCTGAACGAGGATCAGGCCAA
CAAGACCCAATGCCATCAGCAGATGCACGACAATTACGACCTTTTCCAGCATCTTCAGCTTCCCGCGGCACG
ACAGATCGCGCCGAACTCATCCGCATTGAGGGAGGCTCCACCTACCAGCCCCCCATCGATATCCGGCATGCC
GAACAACTCGGCTGCACTTGCCGCCTTTACACTGCCGCCGTAAAGGAGTCGCACACCTTTTGCGACCTCGGC
ATTTTCCGCTGCCAGTTGCGCGCGGATCGCCGCGTGCACTTCCTGGGCTTGCGCGGGGGACGCGGTCAACCC
GGTCCCGATCGCCCAGACCGGCTCGTAAGCCACGACTGCGCGAGCAAAAGCTCCAACACCCAACTCGTCGAT
CACGCTTCCCAGCTGCCTTGCGACAACCTCCAGCGTCTTGCCCGCCTCGCGCTCCGCCCGGGTTTCCCCGAC
ACACAGCACCGGCACCAGGCCGCACGACTGAGCCGCGGCAAACTTGCGACTCACAACCTCGTCACTCTCGCC
GAGAATCAGGCGACGCTCCGAGTGGCCCACAAGGACCATGCTACAACCGACATCCGCCAACTGACTGGGAGC
AGTCTCACCGGTCAGCGCGCCTTGCATCGGCTCGACGGCGCTGTTCTGCGCACCTACATCGATCGCCTTGCC
GGCCAGGCCCTGGATGACCTGGCTGATGAACAAGCAAGGCGGCATCACAGCTACATCGACTCCGCTCGGCAA
CGCCAGCTGACGCAAGCCTTTGATCAACTCGGCCACACTGGAATGCGTACCGTGCATTTTCCAGTTACCGGC
CACCAAGGGTCGACGCATGCTGTACCTCGCGGGGCAAAGTGGGCGCAGATGTTACTCAACAGTTTCCAGACT
GGCAAGCAAAATCAAGCACATACCTCAGAAACAATTTTTGCCAGCTGTTCGGCGTGGGCACGAACGCTAGCT
TCCTCGTCGCCCTCGACCATCACCCGGACCAACGGCTCCGTGCCGGATTTGCGCAGCAGGACACGACCGCGC
CCGCCCATTTGCTCGGTGACGCGGACGCTGGCCTCCTTCACCGAGGGGTGCTCGAGCGGATCGTTTTCGCCC
TTGAAGCGCACATTGATCAGCACCTGGGGGCACTTGCGAATCCCCTGGCGCGCCTCGGCCAGGGTCTGGCCG
CGATGCTTGAGCGCCATCAGCACCTGTAGCGCCGCGATGATGGCATCGCCCGTCGTGGTGTTCTGGCAGCAG
ACGATATGCCCCGAATTCTCCCCTCCCAGCATCCAGTTCCGAGCCAGCAGTTCGGCCATCACATAG
Translation:
MPKHLHRKKPLHPHPCHAERGSGQQDPMPSADARQLRPFPASSASRGTTDRAELIRIEGGSTYQPPIDIRHA
EQLGCTCRLYTAAVKESHTFCDLGIFRCQLRADRRVHFLGLRGGRGQPGPDRPDRLVSHDCASKSSNTQLVD
HASQLPCDNLQRLARLALRPGFPDTQHRHQAARLSRGKLATHNLVTLAENQATLRVAHKDHATTDIRQLTGS
SLTGQRALHRLDGAVLRTYIDRLAGQALDDLADEQARRHHSYIDSARQRQLTQAFDQLGHTGMRTVHFPVTG
HQGSTHAVPRGAKWAQMLLNSFQTGKQNQAHTSETIFASCSAWARTLASSSPSTITRTNGSVPDLRSRTRPR
PPICSVTRTLASFTEGCSSGSFSPLKRTLISTWGHLRIPWRASARVWPRCLSAISTCSAAMMASPVVVFWQQ
TICPEFSPPSIQFRASSSAIT*
AnnotationID:6751GeneID:6750
AnnotatorUID: diggins
Modification Date/Time: 2005-03-09 09:09:44
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16505
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30585
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49752How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4868229Stop: 4869590
Length: 1362
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCCGAAGCACCTGCACCGAAAGAAGCCCCTGCATCCGCACCCTTGCCATGCTGAACGAGGATCAGGCCAA
CAAGACCCAATGCCATCAGCAGATGCACGACAATTACGACCTTTTCCAGCATCTTCAGCTTCCCGCGGCACG
ACAGATCGCGCCGAACTCATCCGCATTGAGGGAGGCTCCACCTACCAGCCCCCCATCGATATCCGGCATGCC
GAACAACTCGGCTGCACTTGCCGCCTTTACACTGCCGCCGTAAAGGAGTCGCACACCTTTTGCGACCTCGGC
ATTTTCCGCTGCCAGTTGCGCGCGGATCGCCGCGTGCACTTCCTGGGCTTGCGCGGGGGACGCGGTCAACCC
GGTCCCGATCGCCCAGACCGGCTCGTAAGCCACGACTGCGCGAGCAAAAGCTCCAACACCCAACTCGTCGAT
CACGCTTCCCAGCTGCCTTGCGACAACCTCCAGCGTCTTGCCCGCCTCGCGCTCCGCCCGGGTTTCCCCGAC
ACACAGCACCGGCACCAGGCCGCACGACTGAGCCGCGGCAAACTTGCGACTCACAACCTCGTCACTCTCGCC
GAGAATCAGGCGACGCTCCGAGTGGCCCACAAGGACCATGCTACAACCGACATCCGCCAACTGACTGGGAGC
AGTCTCACCGGTCAGCGCGCCTTGCATCGGCTCGACGGCGCTGTTCTGCGCACCTACATCGATCGCCTTGCC
GGCCAGGCCCTGGATGACCTGGCTGATGAACAAGCAAGGCGGCATCACAGCTACATCGACTCCGCTCGGCAA
CGCCAGCTGACGCAAGCCTTTGATCAACTCGGCCACACTGGAATGCGTACCGTGCATTTTCCAGTTACCGGC
CACCAAGGGTCGACGCATGCTGTACCTCGCGGGGCAAAGTGGGCGCAGATGTTACTCAACAGTTTCCAGACT
GGCAAGCAAAATCAAGCACATACCTCAGAAACAATTTTTGCCAGCTGTTCGGCGTGGGCACGAACGCTAGCT
TCCTCGTCGCCCTCGACCATCACCCGGACCAACGGCTCCGTGCCGGATTTGCGCAGCAGGACACGACCGCGC
CCGCCCATTTGCTCGGTGACGCGGACGCTGGCCTCCTTCACCGAGGGGTGCTCGAGCGGATCGTTTTCGCCC
TTGAAGCGCACATTGATCAGCACCTGGGGGCACTTGCGAATCCCCTGGCGCGCCTCGGCCAGGGTCTGGCCG
CGATGCTTGAGCGCCATCAGCACCTGTAGCGCCGCGATGATGGCATCGCCCGTCGTGGTGTTCTGGCAGCAG
ACGATATGCCCCGAATTCTCCCCTCCCAGCATCCAGTTCCGAGCCAGCAGTTCGGCCATCACATAG