ViewGene

Locus Name:
GeneID:
Location:

GeneID:6746
TrivialName: PA14_62550
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_62550
PAO1 Ortholog Locus:
Sequence Length:1308
Protein Length:435
Start: 5582491
Stop: 5581184
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGGCCGAGTCCTTCGGTTTCCTCGCCGGCACTTTCGCGCAGCAGGAGGAAGTCGTAGCCGGCGCGGAAGCG
CGGGTTTTCCAGGAGCAGGTCGGCGCGCTTGCCCTGGCGTCGCGGCAGACGTTCCTGCATATCCCAGATCTC
GCGGATCGGCAGGGTGAAACGCTTGGGAATGGCGATCCGCTGGCACTGTTCGCTGATCAGTTCGTGGGCGGC
TTCCTGCATCGCCGGGATGGCCGGCATGCCTTTCTCCTGCAACTGCGCGACGCGTGCCGGCAGGGCCGGCCA
GAGCAGTGCGGCGAAGAGGAAGGCCGGGGTTACCGGCTTGCCCTGGCGAATTCGCGCATCGGTATTGGCCAG
GGCCTGGCGGATCAGCTTGCCGGTGTAGTCGGGGTTGGCCTGCAGTGCCTTGGCGCTGGCCGGGAACAGCGG
CGCGAACAGTTCGTACTCGACCAGCAGTTCGAAAGTGCGCTCGGCCCGGCCGGCGAGGAACAGCTTGAGCAC
CTCGTCGAACAGGCGCGCCGAAGGGATTTCCCGCAGCAGCGGGGCCAGCCGGCGAATCGGCGTGGCGCTGTG
CTTTTCGATCTCGAAGTCGAGCTTGGCGGCGAAACGTACCGCCCGCAGCATCCGCACCGGGTCTTCCAGATA
ACGCTGCTCCGGATCGCCGATCAGGCGGATCAGGCGATTGCGGATGTCGTGAACGCCATTGGCGTAGTCCAG
CAGCCGCTCGCTGGTGACGTCGAAGTACAGGGCATTGATGGTGAAGTCGCGGCGCTGGGCGTCGTCTTCCAG
GCTGCCATAGACGTTGTCGCGCAGGATGCGGCCGCTTTCGTTGCTGGACGCGCGGCTATCGCCATCGTCCTG
GCCTTCCGGATGATGGGCGCGGAAGGTGGCGACCTCGATGATCTCGCGGCCGAAGTGCACGTGTACCAGTTT
GAAGCGGCGGCCGATGATCCGCGCGTTGCGGAATTCGGCGCGGACCTGCTCCGGCGTGGCGCTGGTGGCGAC
ATCGAAGTCCTTGGGAGCGATGCCGAGCATCTGGTCGCGTACGCAGCCCCCGACCACGTAGGCCTGGTAGCC
GGCCCGCTGGAGGATCTCGACGACCTTGACGGCGTTCCGGCTGAACTGGTCCCGGCGCAGGGAGTGCTGGTT
GTTACCGATGACTTCCGGGGTTGTACGGACGGCGCGCGGACGGCGCAGGGGGGAACGAATGGTCTGGATCAG
CTTTTTCAGCATGGATGTGTTATCGGGAGCACGATGTGGGTGATTGCACGCCTGCGTTGCTCAAACAGGACG
GACGTCGGGTAA
Translation:
MAESFGFLAGTFAQQEEVVAGAEARVFQEQVGALALASRQTFLHIPDLADRQGETLGNGDPLALFADQFVGG
FLHRRDGRHAFLLQLRDACRQGRPEQCGEEEGRGYRLALANSRIGIGQGLADQLAGVVGVGLQCLGAGREQR
REQFVLDQQFESALGPAGEEQLEHLVEQARRRDFPQQRGQPANRRGAVLFDLEVELGGETYRPQHPHRVFQI
TLLRIADQADQAIADVVNAIGVVQQPLAGDVEVQGIDGEVAALGVVFQAAIDVVAQDAAAFVAGRAAIAIVL
AFRMMGAEGGDLDDLAAEVHVYQFEAAADDPRVAEFGADLLRRGAGGDIEVLGSDAEHLVAYAAPDHVGLVA
GPLEDLDDLDGVPAELVPAQGVLVVTDDFRGCTDGARTAQGGTNGLDQLFQHGCVIGSTMWVIARLRCSNRT
DVG*
AnnotationID:6747GeneID:6746
AnnotatorUID: diggins
Modification Date/Time: 2005-03-09 07:07:42
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16500
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30577
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49748How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4846171Stop: 4844864
Length: 1308
Start Codon: TTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGCCGAGTCCTTCGGTTTCCTCGCCGGCACTTTCGCGCAGCAGGAGGAAGTCGTAGCCGGCGCGGAAGCG
CGGGTTTTCCAGGAGCAGGTCGGCGCGCTTGCCCTGGCGTCGCGGCAGACGTTCCTGCATATCCCAGATCTC
GCGGATCGGCAGGGTGAAACGCTTGGGAATGGCGATCCGCTGGCACTGTTCGCTGATCAGTTCGTGGGCGGC
TTCCTGCATCGCCGGGATGGCCGGCATGCCTTTCTCCTGCAACTGCGCGACGCGTGCCGGCAGGGCCGGCCA
GAGCAGTGCGGCGAAGAGGAAGGCCGGGGTTACCGGCTTGCCCTGGCGAATTCGCGCATCGGTATTGGCCAG
GGCCTGGCGGATCAGCTTGCCGGTGTAGTCGGGGTTGGCCTGCAGTGCCTTGGCGCTGGCCGGGAACAGCGG
CGCGAACAGTTCGTACTCGACCAGCAGTTCGAAAGTGCGCTCGGCCCGGCCGGCGAGGAACAGCTTGAGCAC
CTCGTCGAACAGGCGCGCCGAAGGGATTTCCCGCAGCAGCGGGGCCAGCCGGCGAATCGGCGTGGCGCTGTG
CTTTTCGATCTCGAAGTCGAGCTTGGCGGCGAAACGTACCGCCCGCAGCATCCGCACCGGGTCTTCCAGATA
ACGCTGCTCCGGATCGCCGATCAGGCGGATCAGGCGATTGCGGATGTCGTGAACGCCATTGGCGTAGTCCAG
CAGCCGCTCGCTGGTGACGTCGAAGTACAGGGCATTGATGGTGAAGTCGCGGCGCTGGGCGTCGTCTTCCAG
GCTGCCATAGACGTTGTCGCGCAGGATGCGGCCGCTTTCGTTGCTGGACGCGCGGCTATCGCCATCGTCCTG
GCCTTCCGGATGATGGGCGCGGAAGGTGGCGACCTCGATGATCTCGCGGCCGAAGTGCACGTGTACCAGTTT
GAAGCGGCGGCCGATGATCCGCGCGTTGCGGAATTCGGCGCGGACCTGCTCCGGCGTGGCGCTGGTGGCGAC
ATCGAAGTCCTTGGGAGCGATGCCGAGCATCTGGTCGCGTACGCAGCCCCCGACCACGTAGGCCTGGTAGCC
GGCCCGCTGGAGGATCTCGACGACCTTGACGGCGTTCCGGCTGAACTGGTCCCGGCGCAGGGAGTGCTGGTT
GTTACCGATGACTTCCGGGGTTGTACGGACGGCGCGCGGACGGCGCAGGGGGGAACGAATGGTCTGGATCAG
CTTTTTCAGCATGGATGTGTTATCGGGAGCACGATGTGGGTGATTGCACGCCTGCGTTGCTCAAACAGGACG
GACGTCGGGTAA