ViewGene

Locus Name:
GeneID:
Location:

GeneID:6745
TrivialName: PA14_62500
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_62500
PAO1 Ortholog Locus:
Sequence Length:1176
Protein Length:391
Start: 5575769
Stop: 5574594
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 107/361 (29%), Positives = 136/361 (37%), Gaps = 89/361 (24%)
Sequence:
ATGCTTGGGCCGGCAGGCTACAGGCTGCGGGTGGGTGCCGGCAAGCCGCCGGGCGGGCTACAGGCGTTCCTC
GGGAAGGGTAGCGCAGCGCGGGATGCGCGTGGCGTCCCAGTGCGCGACGCCCCAGGCCAGCGCCTCGCTGGC
GCTGGCCTGGGCCAGTTCGGCCGGCGGCCGCTGGCCGAGCGCGCGCAGGGCGCGGGTCAGCGGCGCGGCGGC
CTGCTCGGCGGGCAGCGGCGGGGAGCGGTAGGACTTGCCGAGCTTGTGCCCGTCCGGCTGGACGATCAGCGG
CACGTGCAGGTAGCGCGGCTGGCTCAACCCCAGCAGTTCCTGGAGGTAAAGCTGGCGCGGGGTCGAGTCGAG
CAGGTCGGCGCCGCGGACGATGTCGGTGATGCCCTGCCAGGCGTCGTCCAGCACCACCGCCAGTTGGTAGGC
GTAGAAGCCATCGCGGCGCTGGATGACGAAATCGCCGACCTCGCGGCCGAGATGCTGGCGGACTTCGCCCTG
CACGCGGTCGACGAAGCGATATTCCAGCTCCGGCACGCGCAGGCGGATCGCCGCGTCCTCGCGGGCGTGCCC
GGCGTCGCGGCAGAAGCCTGGGTAGATCCCGGCGAATCCCTCAAGCTGTTTGCGCGAGCAAGTGCAGGCGTA
GGCCAGGCCGCTGCGCAGCAGTTGCTCGACCACTGCGGCGTAGGCCGGGAAGCGTTCGCTCTGCCGCTCCAC
CGCGCCGTCCCATTCGAAGCCGTAGCGCTCCAGGGTTTCCAGGATCGCCTGCTGGGCGCCCGGGACTTCGCG
GGGCGGGTCGAGGTCTTCCATGCGCACCAGCCAGCGGCCGCCGACGGCACGCGCGTCCAGGTAGGAGGCGAC
GGCCGCCACCAGGGAACCGAAGTGCAGGTAGCCGCTGGGCGTCGGGGCGAAGCGGCCTACATAGGAAGAGGT
CATGGCGCGGGCGGTGCGGCGGGGAACGGCGGAAACGAAACGGGGCGCCTTGGCGCCCCGTCGGTCCGGCTC
AGGAGCCGAGTTGCTTCTCGCGGATTTCCGCGAGGGTCTTGCAGTCGATGCAGAGGGTCGCGGTGGGGCGTG
CCTCCAGGCGACGGATGCCAATCTCGACGCCGCAGGAGTCGCACCAGCCGTACTCTTCGTCTTCGATCAGTT
GCAGGGTCTCGTCGATCTTCTTGA
Translation:
MLGPAGYRLRVGAGKPPGGLQAFLGKGSAARDARGVPVRDAPGQRLAGAGLGQFGRRPLAERAQGAGQRRGG
LLGGQRRGAVGLAELVPVRLDDQRHVQVARLAQPQQFLEVKLARGRVEQVGAADDVGDALPGVVQHHRQLVG
VEAIAALDDEIADLAAEMLADFALHAVDEAIFQLRHAQADRRVLAGVPGVAAEAWVDPGESLKLFARASAGV
GQAAAQQLLDHCGVGREAFALPLHRAVPFEAVALQGFQDRLLGARDFAGRVEVFHAHQPAAADGTRVQVGGD
GRHQGTEVQVAAGRRGEAAYIGRGHGAGGAAGNGGNETGRLGAPSVRLRSRVASRGFPRGSCSRCRGSRWGV
PPGDGCQSRRRRSRTSRTLRLRSVAGSRRSS*
AnnotationID:6746GeneID:6745
AnnotatorUID: diggins
Modification Date/Time: 2005-03-09 06:06:49
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13228
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30575
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49747How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4839449Stop: 4838274
Length: 1176
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTTGGGCCGGCAGGCTACAGGCTGCGGGTGGGTGCCGGCAAGCCGCCGGGCGGGCTACAGGCGTTCCTC
GGGAAGGGTAGCGCAGCGCGGGATGCGCGTGGCGTCCCAGTGCGCGACGCCCCAGGCCAGCGCCTCGCTGGC
GCTGGCCTGGGCCAGTTCGGCCGGCGGCCGCTGGCCGAGCGCGCGCAGGGCGCGGGTCAGCGGCGCGGCGGC
CTGCTCGGCGGGCAGCGGCGGGGAGCGGTAGGACTTGCCGAGCTTGTGCCCGTCCGGCTGGACGATCAGCGG
CACGTGCAGGTAGCGCGGCTGGCTCAACCCCAGCAGTTCCTGGAGGTAAAGCTGGCGCGGGGTCGAGTCGAG
CAGGTCGGCGCCGCGGACGATGTCGGTGATGCCCTGCCAGGCGTCGTCCAGCACCACCGCCAGTTGGTAGGC
GTAGAAGCCATCGCGGCGCTGGATGACGAAATCGCCGACCTCGCGGCCGAGATGCTGGCGGACTTCGCCCTG
CACGCGGTCGACGAAGCGATATTCCAGCTCCGGCACGCGCAGGCGGATCGCCGCGTCCTCGCGGGCGTGCCC
GGCGTCGCGGCAGAAGCCTGGGTAGATCCCGGCGAATCCCTCAAGCTGTTTGCGCGAGCAAGTGCAGGCGTA
GGCCAGGCCGCTGCGCAGCAGTTGCTCGACCACTGCGGCGTAGGCCGGGAAGCGTTCGCTCTGCCGCTCCAC
CGCGCCGTCCCATTCGAAGCCGTAGCGCTCCAGGGTTTCCAGGATCGCCTGCTGGGCGCCCGGGACTTCGCG
GGGCGGGTCGAGGTCTTCCATGCGCACCAGCCAGCGGCCGCCGACGGCACGCGCGTCCAGGTAGGAGGCGAC
GGCCGCCACCAGGGAACCGAAGTGCAGGTAGCCGCTGGGCGTCGGGGCGAAGCGGCCTACATAGGAAGAGGT
CATGGCGCGGGCGGTGCGGCGGGGAACGGCGGAAACGAAACGGGGCGCCTTGGCGCCCCGTCGGTCCGGCTC
AGGAGCCGAGTTGCTTCTCGCGGATTTCCGCGAGGGTCTTGCAGTCGATGCAGAGGGTCGCGGTGGGGCGTG
CCTCCAGGCGACGGATGCCAATCTCGACGCCGCAGGAGTCGCACCAGCCGTACTCTTCGTCTTCGATCAGTT
GCAGGGTCTCGTCGATCTTCTTGA