ViewGene
Locus Name:
GeneID:
Location:

GeneID:6741
TrivialName: PA14_62310
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_62310
PAO1 Ortholog Locus:
Sequence Length:876
Protein Length:291
Start: 5559004
Stop: 5559879
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGGCGGCTTCCGTACTCAGCGGTTTCGCGGAAGGATAAAAGGCTGCGGAGAGAGCCGCCAGGCCATCCGG
CAGGCGCGGACCGAGGCCGCCCACCAGGAGCGTCGGGTCCAGCACCAGCAGACGTCCGTCACGCGCCGCGCG
GGTCGCGGCGAGGCCGGGGTTCTGCTTGAGCAGCGCGGCACGCGCCGCATCACCTTCGAGGCTGCGGTCGGC
GATCACCACCGCGGCCGGATCGAGCGCGGCCAGGGCTTCCACCGAGATCGGCTTGTAACCCTCATGGGTAGC
CAGGTTGCGTGCTCCGGCCCGGTTCAGGACCCAATCGCCGCCGGTATTGCGCCCGGCTACCAGCAACTGACC
GCCGGCGTTGCCGATCACCAGCAGGACGCCCGGGGCCGGCTGGCTCTTCTGCGCGGCCGCGATCCAGTCCGC
CTGGCGCCGCAGCCGCTGACGATAGTCAAGTTCGGCGGCCTCGGCGCGCTGGGGCACGCCGAGCCAGTCGCC
GAGCTTCTTCAGGTTGCTTTCCAGTGCCTCCAGATCCGGCTTGGCGGAGAGGGTCTCGACCCGCACGCCGGC
GCCTTCGAGCTGCTTGAGTACCGGCGGAGGCCCCATTTCCTCGGTGCCGATGAGGATATCCGGACGCAACGC
CAGCACGCCCTCGGCAGCCAGTTGGCGCTGGTAGCCGACGCTCGGCAACTGTTTCAGCGCCTGCGGATGCTG
GCTGGTGGTGTCCACCCCGACCAGCTTGCTCTCGCCGCCCAGCGCCACCACCCATTCGCTCAGCGAGCCGCC
CGCGCTCACCCAGCGTTGCGGCAGCTCGGCGGCCTGGGCCATGCCGGTGCCGAGCAGGATGCCCAGCGCCAA
CCCGTTGAATAG
Translation:
MGGFRTQRFRGRIKGCGESRQAIRQARTEAAHQERRVQHQQTSVTRRAGRGEAGVLLEQRGTRRITFEAAVG
DHHRGRIERGQGFHRDRLVTLMGSQVACSGPVQDPIAAGIAPGYQQLTAGVADHQQDARGRLALLRGRDPVR
LAPQPLTIVKFGGLGALGHAEPVAELLQVAFQCLQIRLGGEGLDPHAGAFELLEYRRRPHFLGADEDIRTQR
QHALGSQLALVADARQLFQRLRMLAGGVHPDQLALAAQRHHPFAQRAARAHPALRQLGGLGHAGAEQDAQRQ
PVE*
AnnotationID:6742GeneID:6741
AnnotatorUID: diggins
Modification Date/Time: 2005-03-09 05:05:08
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13220




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30567




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49743How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4822684Stop: 4823559

          
Length: 876


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGGCGGCTTCCGTACTCAGCGGTTTCGCGGAAGGATAAAAGGCTGCGGAGAGAGCCGCCAGGCCATCCGG 
CAGGCGCGGACCGAGGCCGCCCACCAGGAGCGTCGGGTCCAGCACCAGCAGACGTCCGTCACGCGCCGCGCG 
GGTCGCGGCGAGGCCGGGGTTCTGCTTGAGCAGCGCGGCACGCGCCGCATCACCTTCGAGGCTGCGGTCGGC 
GATCACCACCGCGGCCGGATCGAGCGCGGCCAGGGCTTCCACCGAGATCGGCTTGTAACCCTCATGGGTAGC 
CAGGTTGCGTGCTCCGGCCCGGTTCAGGACCCAATCGCCGCCGGTATTGCGCCCGGCTACCAGCAACTGACC 
GCCGGCGTTGCCGATCACCAGCAGGACGCCCGGGGCCGGCTGGCTCTTCTGCGCGGCCGCGATCCAGTCCGC 
CTGGCGCCGCAGCCGCTGACGATAGTCAAGTTCGGCGGCCTCGGCGCGCTGGGGCACGCCGAGCCAGTCGCC 
GAGCTTCTTCAGGTTGCTTTCCAGTGCCTCCAGATCCGGCTTGGCGGAGAGGGTCTCGACCCGCACGCCGGC 
GCCTTCGAGCTGCTTGAGTACCGGCGGAGGCCCCATTTCCTCGGTGCCGATGAGGATATCCGGACGCAACGC 
CAGCACGCCCTCGGCAGCCAGTTGGCGCTGGTAGCCGACGCTCGGCAACTGTTTCAGCGCCTGCGGATGCTG 
GCTGGTGGTGTCCACCCCGACCAGCTTGCTCTCGCCGCCCAGCGCCACCACCCATTCGCTCAGCGAGCCGCC 
CGCGCTCACCCAGCGTTGCGGCAGCTCGGCGGCCTGGGCCATGCCGGTGCCGAGCAGGATGCCCAGCGCCAA 
CCCGTTGAATAG