ViewGene
Locus Name:
GeneID:
Location:

GeneID:6736
TrivialName: PA14_61970
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 15:03:13
LocusName:PA14_61970
PAO1 Ortholog Locus:
Sequence Length:759
Protein Length:252
Start: 5526650
Stop: 5525892
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGTTCTTCGGCGATGGCGCGGGCGAGGGCGTCTTCCTCGCTCTCTTCGGACAATTCTTCGTCGCTGGCCAT
CAGCGGTTCGATCTCGCCGTCATCGACCAGCACCGGCGTCTGCAACGGCAGGTCGGCGTGCAGGCTGGCGGA
CAGGTTGCGGTCCTGCTGCACCGACAGGCAGACGTCGAGGAAACGGTGCATCGGCGGCATGAAGCGGTACAC
GCCGCTGTCCTCGGAGGCGAAGCCGAGCTGGGTCAGGCGGCGCATGACTTTCTCTTCCAGTTCTTCCTGGGT
CTGCACCTCGGCCTGGAGGAACAGGTCGCGGTATTTCTCCAGCAGCGGCGGCAGCTCTTCGCGGCCGATGCT
GCCGCCGTCCAGCACGGACAGCGGGTCGCGGCCCTGGTCGGCGAGGTGTTCGACGAGGATGAAGGTGAACAG
CGCCAGGCGTTGGGCGGTCTTGTTCACCTGGGCGCCGACCTGCTCCGGGACGAAGTAGTAGAAGCCGCGGGT
ATCGCAGACCAGCTCGAAGCCCATGGCGCGGAACAGGCCGCGGTACTGGTCCTGGTGCGAGGACAGCTGGGT
GTACAGCTCGGGGTCGCGGTGGCTGATGTGGTAGCCCTTGAACAGCTCGCGGAAGATCGGCGCGAGCTGGGT
CAGTTCGGAGAGATCAAGATGCATGGGTTTCGCTCGCGGAAAGGGTGTCTGCGTCCCTGGCCTGGCCCTTGT
CCTTGGCGGCGGGGTTCAGGGCGAAGGAGCAGAGGCTGA
Translation:
MFFGDGAGEGVFLALFGQFFVAGHQRFDLAVIDQHRRLQRQVGVQAGGQVAVLLHRQADVEETVHRRHEAVH
AAVLGGEAELGQAAHDFLFQFFLGLHLGLEEQVAVFLQQRRQLFAADAAAVQHGQRVAALVGEVFDEDEGEQ
RQALGGLVHLGADLLRDEVVEAAGIADQLEAHGAEQAAVLVLVRGQLGVQLGVAVADVVALEQLAEDRRELG
QFGEIKMHGFRSRKGCLRPWPGPCPWRRGSGRRSRG*
AnnotationID:6737GeneID:6736
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 15:03:25
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16491




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30558




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49738How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4790330Stop: 4789572

          
Length: 759


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGTTCTTCGGCGATGGCGCGGGCGAGGGCGTCTTCCTCGCTCTCTTCGGACAATTCTTCGTCGCTGGCCAT 
CAGCGGTTCGATCTCGCCGTCATCGACCAGCACCGGCGTCTGCAACGGCAGGTCGGCGTGCAGGCTGGCGGA 
CAGGTTGCGGTCCTGCTGCACCGACAGGCAGACGTCGAGGAAACGGTGCATCGGCGGCATGAAGCGGTACAC 
GCCGCTGTCCTCGGAGGCGAAGCCGAGCTGGGTCAGGCGGCGCATGACTTTCTCTTCCAGTTCTTCCTGGGT 
CTGCACCTCGGCCTGGAGGAACAGGTCGCGGTATTTCTCCAGCAGCGGCGGCAGCTCTTCGCGGCCGATGCT 
GCCGCCGTCCAGCACGGACAGCGGGTCGCGGCCCTGGTCGGCGAGGTGTTCGACGAGGATGAAGGTGAACAG 
CGCCAGGCGTTGGGCGGTCTTGTTCACCTGGGCGCCGACCTGCTCCGGGACGAAGTAGTAGAAGCCGCGGGT 
ATCGCAGACCAGCTCGAAGCCCATGGCGCGGAACAGGCCGCGGTACTGGTCCTGGTGCGAGGACAGCTGGGT 
GTACAGCTCGGGGTCGCGGTGGCTGATGTGGTAGCCCTTGAACAGCTCGCGGAAGATCGGCGCGAGCTGGGT 
CAGTTCGGAGAGATCAAGATGCATGGGTTTCGCTCGCGGAAAGGGTGTCTGCGTCCCTGGCCTGGCCCTTGT 
CCTTGGCGGCGGGGTTCAGGGCGAAGGAGCAGAGGCTGA