ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6734

TrivialName: PA14_61900

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 18:06:41

LocusName: PA14_61900

PAO1 Ortholog Locus:

Sequence Length: 1704

Protein Length: 567

Start: 5520914

Stop: 5522617

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAA22974.1| (M60351) filamentous hemagglutinin [Bordetella pertussis] Identities = 128/546 (23%), Positives = 201/546 (36%), Gaps = 95/546 (17%)

Sequence:

ATGATAGCGGTTCTTCGACCTCGGCGGAGCGGCTTTGTCCCGCCATGCGACGGTTCGCCCTCAACGCGGGGC
GACGGTGAAGATGTTGACGTTGCCTTGCAGCTTGAGGGTGCCGTCGATGCGTGCGCTGACCAGGTTGGTCTG
CACCAGCCCGGGATCGGTACCGCGCGCCTTGTTGGCGCCAGCGATGGTGAAGCGCAGGTCCTGGAAGCTGGT
GTCCTTCAGGCCGACGCGCAGCACCGGGCGGTTGAAGGCAGCGCCGTCGCCGCCGAAGCCGTCCTTGATGGT
CACCACGTCCAGGGTGACTTCGTCGAAGCTGAACTTGCCGCTGATATCGTCGATCACCAGGTAGTTGTTGCC
GCTGCCGGCCGGCTGGATCGCCAGGCGCGCGCCGCAGCCGCCGGCGCAGCGCGTCTGCGAAGGATTTTCCTG
GAGATTGAGCGAGGCGCTGATGCTGATCCCGGCCTGGCCGACCACGTCGTCCAGATCGCTATCGCCCAGCGA
GCGCAACTCGGCCCCGGCCGAAGCGCTGAACAGCAGCGCCAGCGCCGCGAGGATGCCGATGCCGCCTGCCAG
TGGATGAGTCTGCTTGGCCATGTGCTGCGTACCTCGTTTCGCGCCGCCACCTCAGAGGTTGTGCGACGTCAC
CTTCAGGTAGTTGAAGCTGAGCCCGGATATCTCGTTGCGGCCCATGTTGTAGCCGCCGGTCGGTACCTGCCC
GTAGCCTGGCCGGGTACCGCCGATGTTGAGGTTCTCGATCACCAGGCTGGTGCGCGGCGCATTGGCGTAGAA
GTCGGCGGCGTTGGCCAGGGTCAGCTTGGGCAGTTCGAAAGTGAAGTTGCCGTCGGCGGTGACCGAGAACAG
CAACGGCTGCGACTTCCCGTAGCCAAGCGCGACGCTGGCATAGGCGTTGGTCAGGTAGACGGTGCGCGCAGC
CTGCTCGGCGGCGCTGACGCAACTGGGCGAGCCAGCACCGCAGGACATGATCTCGAAAGTCTTGGCGTAGAG
GTTCAGGCGCATCTCGCCAACCAGTTGGCTGCGCGCGTTGGCGCCCCAGAAGCGCAGGTAGGAACCGTCCAT
CGCCAGTTCGGAGAAGTCCAGGTTGAGCACATCGGTGCGCGTGGAAGTGACGCCGAAGTCGAAGCGGATGCC
GGCGTCGACCTTTTCGCTGGCCCGGCTCGAGCAGTTGCTGCCGGCACCGGTGTAACCAGCGATGCACGGCTG
GCCGCCGGCGCCGCTCACCAGGCTGGGGAAGGCCAGTTCGATCACGTCCGCGGTGTCCGGCAAGGTGCTGAC
CACCCGCCCGTCGTCGAGCTGGGTGGTCAGCACCGAACCCTTGGCCAGATTCAGCTTGAACGGGAAATTGAG
ACGGCCGAGAGTCACCGGCGCCAGGGTGCTGCCCTTGTTGCTGCCAGTGGCGGCGACGTACAGCTCCTTTAC
CGTGATCGGCACGTTCTGCCCGGTGGCGGTGTTGGTCACGCCATTGATCGCGATGGTGGCCTTGTTGCCGTC
GACCATGGCGCTGTCGAGGACGAAGCCGATGCCGGCACCCTGCACGTCCGACAGTTGCTCGTCATCGAGCGC
TGTCATCTCGGCATGGGCGAAGGGGGCGGCCAGCAGGGCCGCGAGCAGGCAGGCGCGACTCATCTCAGCAGC
CCTTGTTCAGGCCGCCCAGGCAGGTGTCCTGCCGTGGAATGCCATTGA

Translation:

MIAVLRPRRSGFVPPCDGSPSTRGDGEDVDVALQLEGAVDACADQVGLHQPGIGTARLVGASDGEAQVLEAG
VLQADAQHRAVEGSAVAAEAVLDGHHVQGDFVEAELAADIVDHQVVVAAAGRLDRQARAAAAGAARLRRIFL
EIERGADADPGLADHVVQIAIAQRAQLGPGRSAEQQRQRREDADAACQWMSLLGHVLRTSFRAATSEVVRRH
LQVVEAEPGYLVAAHVVAAGRYLPVAWPGTADVEVLDHQAGARRIGVEVGGVGQGQLGQFESEVAVGGDREQ
QRLRLPVAKRDAGIGVGQVDGARSLLGGADATGRASTAGHDLESLGVEVQAHLANQLAARVGAPEAQVGTVH
RQFGEVQVEHIGARGSDAEVEADAGVDLFAGPARAVAAGTGVTSDARLAAGAAHQAGEGQFDHVRGVRQGAD
HPPVVELGGQHRTLGQIQLEREIETAESHRRQGAALVAASGGDVQLLYRDRHVLPGGGVGHAIDRDGGLVAV
DHGAVEDEADAGTLHVRQLLVIERCHLGMGEGGGQQGREQAGATHLSSPCSGRPGRCPAVECH*

AnnotationID:6735 GeneID:6734

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 18:06:28

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13211

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30554