ViewGene

Locus Name:
GeneID:
Location:

GeneID:6733
TrivialName: PA14_61800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_61800
PAO1 Ortholog Locus:
Sequence Length:1347
Protein Length:448
Start: 5513772
Stop: 5512426
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCATCACGTCGCCGTCCTTGACGATGTAGTCCTTGCCTTCCAGGCGCCACTTGCCGGCTTCCTTGGCGCC
CTGTTCGCCCTTGAACTGGATGAAGTCGTCGTAGGCGACCACTTCGGCGCGGATGAAGCCTTTCTCGAAGTC
GGTGTGGATCACGCCGGCGGCCTGCGGGGCGGTGGCGCCGACGCGGACGGTCCAGGCGCGGACTTCCTTCAC
CCCGGCGGTGAAGTAGGTCTGCAGGTTGAGCAGGCCGTAGCCGGCACGGATCACACGGTTCAGGCCGGGTTC
CTCGAGACCGAGGGACTCGAGGAACATGTCCTTCTCTTCGCCGTCTTCCAGCTCGGCGATCTCGGCTTCGAT
CTTGTTGCACACCGGCACCACCACCGCGCCTTCTTCCTCGGCGATGGCCTTCACCACATCCAGGTGCGGGTT
GTTCTCGAAGCCGTCCTCGGCGACGTTGGCGATGTACATCACCGGCTTGCTGGTCAGCAGGTGGAAGCTGCG
TACCAGGCGCTTCTCCTCGTCACCGAGGTTCTTCAGCAGCGAACGCGCCGGCTTGCCCTCGGTGAAGTGGGG
GATGAGCTTTTCCAGCAGGGCCTTCTGGGCCAGGGCTTCCTTGTCGCCGCCCTTGGCGTTGCGGGCGACTTT
CTGCAGTTGCTTCTCGCAGCTGTCGAGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCGCGCTT
GGGGTCGACGCTGTTGGACACGTGGATCACGTTGTCGTCTTCGAAGCAGCGCACCACGTGGGCGATGGCGTC
GGTCTCGCGGATGTTGGCGAGGAACTTGTTGCCCAGGCCCTCACCCTTGGAGGCGCCCGCCACCAGGCCGGC
GATGTCGACGAATTCCATGGTGGTCGGCAGTACGCGCTCGGGCTTGACGATCTCGGCCAGGGCGTTCAGGCG
CGCGTCGGGCATCGGCACGATGCCGCTGTTCGGCTCGATGGTGCAGAACGGGAAGTTTTCCGCCGCGATACC
GGATTTGGTCAGGGCGTTGAACAGGGTGGACTTGCCGACGTTGGGCAGGCCGACGATGCCGCAGTTGAATCC
CATGCTATGTCCCTCGCGCTCAGACAGGCGCTAGAAAAGTGGTTCAGGCCTTCTGGCTGTGCAGCTTCTGCA
TCGCCCGGGTCCAGTCCCCGGCGAGCATTTCCGGCAGCACGCCGAGGGCGAAGTCGATGCTGGTGTCGAGCA
GTTCCTGCTCGCTGCGCGGGGCGCGGCCGAGCACGTAACCGGAAACCAGGCTGCTGTGCCCCGGATGGCCGA
TGCCAAGCCGCAGGCGATGGAAAGAATTCTGATTGCCGAGCTGGGCGATGA
Translation:
MHHVAVLDDVVLAFQAPLAGFLGALFALELDEVVVGDHFGADEAFLEVGVDHAGGLRGGGADADGPGADFLH
PGGEVGLQVEQAVAGTDHTVQAGFLETEGLEEHVLLFAVFQLGDLGFDLVAHRHHHRAFFLGDGLHHIQVRV
VLEAVLGDVGDVHHRLAGQQVEAAYQALLLVTEVLQQRTRRLALGEVGDELFQQGLLGQGFLVAALGVAGDF
LQLLLAAVEVGEDQFEVDDLDVALGVDAVGHVDHVVVFEAAHHVGDGVGLADVGEELVAQALTLGGARHQAG
DVDEFHGGRQYALGLDDLGQGVQARVGHRHDAAVRLDGAEREVFRRDTGFGQGVEQGGLADVGQADDAAVES
HAMSLALRQALEKWFRPSGCAASASPGSSPRRAFPAARRGRSRCWCRAVPARCAGRGRARNRKPGCCAPDGR
CQAAGDGKNSDCRAGR*
AnnotationID:6734GeneID:6733
AnnotatorUID: diggins
Modification Date/Time: 2005-03-08 07:07:28
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13209
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30552
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49735How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4777452Stop: 4776106
Length: 1347
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCATCACGTCGCCGTCCTTGACGATGTAGTCCTTGCCTTCCAGGCGCCACTTGCCGGCTTCCTTGGCGCC
CTGTTCGCCCTTGAACTGGATGAAGTCGTCGTAGGCGACCACTTCGGCGCGGATGAAGCCTTTCTCGAAGTC
GGTGTGGATCACGCCGGCGGCCTGCGGGGCGGTGGCGCCGACGCGGACGGTCCAGGCGCGGACTTCCTTCAC
CCCGGCGGTGAAGTAGGTCTGCAGGTTGAGCAGGCCGTAGCCGGCACGGATCACACGGTTCAGGCCGGGTTC
CTCGAGACCGAGGGACTCGAGGAACATGTCCTTCTCTTCGCCGTCTTCCAGCTCGGCGATCTCGGCTTCGAT
CTTGTTGCACACCGGCACCACCACCGCGCCTTCTTCCTCGGCGATGGCCTTCACCACATCCAGGTGCGGGTT
GTTCTCGAAGCCGTCCTCGGCGACGTTGGCGATGTACATCACCGGCTTGCTGGTCAGCAGGTGGAAGCTGCG
TACCAGGCGCTTCTCCTCGTCACCGAGGTTCTTCAGCAGCGAACGCGCCGGCTTGCCCTCGGTGAAGTGGGG
GATGAGCTTTTCCAGCAGGGCCTTCTGGGCCAGGGCTTCCTTGTCGCCGCCCTTGGCGTTGCGGGCGACTTT
CTGCAGTTGCTTCTCGCAGCTGTCGAGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCGCGCTT
GGGGTCGACGCTGTTGGACACGTGGATCACGTTGTCGTCTTCGAAGCAGCGCACCACGTGGGCGATGGCGTC
GGTCTCGCGGATGTTGGCGAGGAACTTGTTGCCCAGGCCCTCACCCTTGGAGGCGCCCGCCACCAGGCCGGC
GATGTCGACGAATTCCATGGTGGTCGGCAGTACGCGCTCGGGCTTGACGATCTCGGCCAGGGCGTTCAGGCG
CGCGTCGGGCATCGGCACGATGCCGCTGTTCGGCTCGATGGTGCAGAACGGGAAGTTTTCCGCCGCGATACC
GGATTTGGTCAGGGCGTTGAACAGGGTGGACTTGCCGACGTTGGGCAGGCCGACGATGCCGCAGTTGAATCC
CATGCTATGTCCCTCGCGCTCAGACAGGCGCTAGAAAAGTGGTTCAGGCCTTCTGGCTGTGCAGCTTCTGCA
TCGCCCGGGTCCAGTCCCCGGCGAGCATTTCCGGCAGCACGCCGAGGGCGAAGTCGATGCTGGTGTCGAGCA
GTTCCTGCTCGCTGCGCGGGGCGCGGCCGAGCACGTAACCGGAAACCAGGCTGCTGTGCCCCGGATGGCCGA
TGCCAAGCCGCAGGCGATGGAAAGAATTCTGATTGCCGAGCTGGGCGATGA