ViewGene

Locus Name:
GeneID:
Location:

GeneID:6729
TrivialName: PA14_61630
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_61630
PAO1 Ortholog Locus:
Sequence Length:1506
Protein Length:501
Start: 5501150
Stop: 5499645
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGATCGCCTTGCGCTCCAGGCCGGCCAGTTCCGGCAGCCAGTGGCGGATGAACTCGCCGCGTGGATCGAA
GCGTTCGGACTGCGAGAGCGGATTGAACAGGCGGAAGTAGGGGACGGCGTCGGTGCCGGTGGATGCGCTCCA
CTGCCAGCCACCGTTGTTCGCCGCCAGGTCGCCGTCGATGAGGTGGCGCATGAACCAGCGTTCGCCTTCGCG
CCAGTCGATCAGCAGGTTCTTGCTGAGGAACATCGCTACCACCATCCGCAGGCGATTGTGCATCCAGCCGGT
GGCGAGCAACTGGCGCATTGCTGCATCGATGATCGGTATGCCGGTGCGCCCCTGTTGCCAGGCTTCGAGTTC
CGCCGGGGCCTGGCGCCAGCGCAGGGCTTCGGTCTCCTCGCGGAAGGGGCGGTGCCGGGAGACCCGTGGGTA
GCCGACCAGGATGTGCTTGTAGAACTCGCGCCAGAGCAGCTCGTTGATCCAGGTCGCGGCGCCTTGCTGGCC
GCCGCTGAACTCGCCGCGGTTGGCAACCAGCGCGGCGTCCAGGCATTGCCTGGGCGAGAGTACGCCGGCGGC
CAGGTAGGGCGACAGTTGGCTGGTGCCGGGAAGCGCCGGGAAGTCGCGCCGTTCATGGTAGTCGGCCAGGTG
CTGGTCGGCGAAGCCGCGCAGGCGTTCCTGCGCTACCTCTTCGCCTGCCGGCCAGAGGCGGCGCAAGCTATC
GGCCGGCCGCGGGAAGGCGGGCACGGCATCCGGCAGCGGGTCGCTGGCCAGCGCGTGCGGTGGTTGGGGCTG
CGGACGCGGGCGGACACCCGGCAGGGCCTGGTACAGCCGTTCGTGGCAGACCTTGCGGAACTGGCTGAACAC
CTGGAAATAGCCGCCAGTTCGGGTCAGCACCGAGCCGGGGGCGAAGAACAGCTGGTCGAGGTGGCTGTGGAA
GGCCACGCCCTGTTCGCGCAGGCGTTGGCCGACGGCCTGGTCGCGGCGTTCCTCGTTCACCCCGTATTCCTG
GTTGACGTGTACCGCGCCGATTCCCAGCTCCCGGCAGAGCCGGCCGATGACTTCCGGGGCTTGCCGCCAGTG
GCCGCAGTCGCGCACCAGCAGCGGGATGTTCAGCGCGGCGAGCTGGCGTTGCAGCTCGCCCAGGTTGCGCAG
CCAGAAGTCGACCTTGCAGGGCGCATCGTCGTGTTCCCGCCACTGCGCCGGGCTGAGCAGGTAGAGGGCCAC
GCAAGGGCGTCCATCGGCGGCGGCGAGGAGCGCGCTGTTATCGGTGGTTCGCAGGTCGCAGCGAAACCAGAT
CAGGTTCATCGGAAGTCCGTTCATGGGTTCAACAGGCCTCGTTCGCCGAGCAGGCGGCGGGCTTCCAGGGGC
GTGCTCGCCAGCAGCAGGCCGGCTAGCGCCAGGGTTTCGAAGGCTTCGCGCTGGATCTCCACGGCCGGTCCG
ACCAGCACCACCGGGCAGCTAACCCCTGCCAGCAGGCGCGGCAGGTGCTCCGGGTTGAGGCGATGA
Translation:
MDRLALQAGQFRQPVADELAAWIEAFGLRERIEQAEVGDGVGAGGCAPLPATVVRRQVAVDEVAHEPAFAFA
PVDQQVLAEEHRYHHPQAIVHPAGGEQLAHCCIDDRYAGAPLLPGFEFRRGLAPAQGFGLLAEGAVPGDPWV
ADQDVLVELAPEQLVDPGRGALLAAAELAAVGNQRGVQALPGREYAGGQVGRQLAGAGKRREVAPFMVVGQV
LVGEAAQAFLRYLFACRPEAAQAIGRPREGGHGIRQRVAGQRVRWLGLRTRADTRQGLVQPFVADLAELAEH
LEIAASSGQHRAGGEEQLVEVAVEGHALFAQALADGLVAAFLVHPVFLVDVYRADSQLPAEPADDFRGLPPV
AAVAHQQRDVQRGELALQLAQVAQPEVDLAGRIVVFPPLRRAEQVEGHARASIGGGEERAVIGGSQVAAKPD
QVHRKSVHGFNRPRSPSRRRASRGVLASSRPASARVSKASRWISTAGPTSTTGQLTPASRRGRCSGLRR*
AnnotationID:6730GeneID:6729
AnnotatorUID: diggins
Modification Date/Time: 2005-03-08 06:06:33
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16489
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30544
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49731How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4764830Stop: 4763325
Length: 1506
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGATCGCCTTGCGCTCCAGGCCGGCCAGTTCCGGCAGCCAGTGGCGGATGAACTCGCCGCGTGGATCGAA
GCGTTCGGACTGCGAGAGCGGATTGAACAGGCGGAAGTAGGGGACGGCGTCGGTGCCGGTGGATGCGCTCCA
CTGCCAGCCACCGTTGTTCGCCGCCAGGTCGCCGTCGATGAGGTGGCGCATGAACCAGCGTTCGCCTTCGCG
CCAGTCGATCAGCAGGTTCTTGCTGAGGAACATCGCTACCACCATCCGCAGGCGATTGTGCATCCAGCCGGT
GGCGAGCAACTGGCGCATTGCTGCATCGATGATCGGTATGCCGGTGCGCCCCTGTTGCCAGGCTTCGAGTTC
CGCCGGGGCCTGGCGCCAGCGCAGGGCTTCGGTCTCCTCGCGGAAGGGGCGGTGCCGGGAGACCCGTGGGTA
GCCGACCAGGATGTGCTTGTAGAACTCGCGCCAGAGCAGCTCGTTGATCCAGGTCGCGGCGCCTTGCTGGCC
GCCGCTGAACTCGCCGCGGTTGGCAACCAGCGCGGCGTCCAGGCATTGCCTGGGCGAGAGTACGCCGGCGGC
CAGGTAGGGCGACAGTTGGCTGGTGCCGGGAAGCGCCGGGAAGTCGCGCCGTTCATGGTAGTCGGCCAGGTG
CTGGTCGGCGAAGCCGCGCAGGCGTTCCTGCGCTACCTCTTCGCCTGCCGGCCAGAGGCGGCGCAAGCTATC
GGCCGGCCGCGGGAAGGCGGGCACGGCATCCGGCAGCGGGTCGCTGGCCAGCGCGTGCGGTGGTTGGGGCTG
CGGACGCGGGCGGACACCCGGCAGGGCCTGGTACAGCCGTTCGTGGCAGACCTTGCGGAACTGGCTGAACAC
CTGGAAATAGCCGCCAGTTCGGGTCAGCACCGAGCCGGGGGCGAAGAACAGCTGGTCGAGGTGGCTGTGGAA
GGCCACGCCCTGTTCGCGCAGGCGTTGGCCGACGGCCTGGTCGCGGCGTTCCTCGTTCACCCCGTATTCCTG
GTTGACGTGTACCGCGCCGATTCCCAGCTCCCGGCAGAGCCGGCCGATGACTTCCGGGGCTTGCCGCCAGTG
GCCGCAGTCGCGCACCAGCAGCGGGATGTTCAGCGCGGCGAGCTGGCGTTGCAGCTCGCCCAGGTTGCGCAG
CCAGAAGTCGACCTTGCAGGGCGCATCGTCGTGTTCCCGCCACTGCGCCGGGCTGAGCAGGTAGAGGGCCAC
GCAAGGGCGTCCATCGGCGGCGGCGAGGAGCGCGCTGTTATCGGTGGTTCGCAGGTCGCAGCGAAACCAGAT
CAGGTTCATCGGAAGTCCGTTCATGGGTTCAACAGGCCTCGTTCGCCGAGCAGGCGGCGGGCTTCCAGGGGC
GTGCTCGCCAGCAGCAGGCCGGCTAGCGCCAGGGTTTCGAAGGCTTCGCGCTGGATCTCCACGGCCGGTCCG
ACCAGCACCACCGGGCAGCTAACCCCTGCCAGCAGGCGCGGCAGGTGCTCCGGGTTGAGGCGATGA