ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6728

TrivialName: PA14_61570

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_61570

PAO1 Ortholog Locus:

Sequence Length: 2610

Protein Length: 869

Start: 5492899

Stop: 5495508

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK20156.1| (AY027524) hypothetical protein [Frankia sp. CpI1] Identities = 106/398 (26%), Positives = 146/398 (36%), Gaps = 43/398 (10%)

Sequence:

GTGCTCCAGGCTGGCGCGATAGGGCTTGAGGCCGATCCCCAGCAGGACCACCGCGCCAAGCACCGCGGCCAG
GGTCACCAGCAGCAGCGAGTAGCGCAGCGCCATGTCGTCGGCGAAGACGAAATCGGTGACCAGCGCCACCGC
CGTCGGGCCCACGCCGAGACCGAACAGGGTGACCACGAACAGGTAGATCGCCGAGGCCTGGCCGCGCATCGA
GTTGGGCATGATCTCCTGGATCGCCGCCGGGGCCACGCCGAACGGCATGCTCAGGAAGAACACCGTCGGCGC
CATCAGCGCCGCCGCCCAATTGGCGTTGTCCAGCAGCGGATAGACCAGGGTGAAGGGAATCACCGCCCAGGC
GGCGAGCAGCCCGACGCGCATGTTCGCGTCGCTGCGCCCGCGCTTCGCCCAGTAGTCGGCCAGGCGCCCGCC
GAAGACGATGCCGAGACAGCCGAACACCGCGACGATGCTGCCGTAGACCACCCCGACATGACCGGCGTCCCA
GCCGTGGGTGCGGACGAAGAAGGTCGGCACCCAGGCGCCGCTGCCGTAGCCGGCGAAGGACAGGCAGGCGAA
ACCGAAGTTGTGGCAGAGCACGGTCTTGCGGTTGGCCCGCAGGTAGGCGCCGACCTCGCCCAGCGGCACCGC
CACGCCTGCGCCGACTCCGCGCCGAGCCGGCTCGCGGATCGCCAGCAGCAACAGGCAGAAGAGCACGCCGGC
GGCGCCGAGGATGAGGAAGATCAGTTGCCACGGGCGCACCTCGCCGAACAGCGGCAGGTGCACGTCGCCCTG
GGCCGAGGCGAACTTGATCACCAGCCCGCCGAGCAGGAAGGCCAGCCCCGAGCCCAGGTAGATGCCCATCGA
GTAGACGCTGATCGCCGTCGCCCGACGCTCGCGCGGGAAGCTGTCGGCGATCAGCGAATAGGCCGCTGGCGA
CAGCGCCGCCTCGCCGACCCCGACGCCGACCCGGAAGGTGAGGAATTGCCAATAGCTGCGCGCCAGACCGCA
GGCCGCGGTCATCGCGCTCCACACCAGCACGCCGAACAGGATCAGACCGCGCCGGCTGCGGTTGTCGGCCAT
GCGTCCGAGCGGGATACCGCAAAGGGTGTAGAACAGGGCGAAGGACAAGCCCATCAGCAGGCTCATTTCCGT
ATCGCTGATGGCCAGGTCACGGCGGATCGGGCCGACCAGCAGGTTGAGGATCTGCCGGTCGATGAAGGACAG
CACATAGGCGACCATGAGGATCGCCACCGTGGTCCAGGCCGCAAGGTTGGAGGGATAGCCGTTATTGTTGTT
ATGCATGCCGAACTCCTGGACGCCGCCGAAGCGGCGGATGCGAAGGGAGGGTCGACAGGCAGGATAAGCCGG
CAACATCCGGGCTTATACCCAGGGCAAGGGACTATAGAACTGCTGAATGCGGGAAGCGGGTTCCGGCGAATG
ACCGCCAGGTCATTCGCCGCCGCGTGCGCTCAGAGCCTGTCCAGCATCTCGCGAGCTGGGCGGGGAAGCGGA
GCTGACGAGCGGCAAATGAGCACTTCAAAGCCGTCATACCGCGCCGCGCAGCGGATCATGAACAGGCTCTCA
GAGCGGCCTGGCCAAGCGCCCGCTCATCTCGCCCAGGGCGCCGACCCAGGCGGGGTGGTCGTTGAGGCAGGG
AATCAGCACCAGGTCCTCGCCGCCGGCGCTGATGAACTGCTCGCGGCCGCGCATGCCGATTTCCTCCAGAGT
CTCGATGCAGTCGGCGACGAACGCCGGGCACATCACCAGCAGGCGCTTCACCCCACGCTGCACCAGTTCGTC
GAGCTTGGCGTCGGTATAGGGCTCGATCCACTTGGCGCGCCCCAGGCGCGACTGGAACGACACCGACCAGCG
CCCCTGCTCCAGGCCGGCGCGCTCGGCGAAGGCCTCGGCGGTGCGCAGGCACTGGCTGCGGTAGCAGAGGGC
GAGGGCTTCGGGGCTGACGTTGCGGCTGTTCTCGGCCAGCAGGTCGTGGGCAGGATCCTTCACCAGCTTGCG
GATGTGCCGCTCGGGCAAGCCATGGAAGCTCAGCAACAGATGGTCGTGGGGCTGCTGCAGGTACGGACGCAC
GCTTTCCACCAGGGCATCGAGGTAGACCGGCTGGTCGTAGAACGGCGGCAGCGTGCTGACCTCCAGCTCCAG
GCGATGGGCGGCGATCACCCGGCGCACCTCTTGTTCGGCGGTGGTCGTGGTGCTGTCGGCGAACTGTGGATA
CAGCGGCGCCAGGGTCACCCGCCGGATACCGCGGCGCGCCAGGTCGAGCAGGACCTTCTCGATGGCCGGCTG
GCCGTAGCGCATCGCCAGTTCCACCGGTCCATGCGGCCAGTGCGGCTTCATCGCTTCCTGCAGGCGACGACT
GAGGACGATCAGTGGCGACCCTTCGTCCCACCAGATCGAGCTGTAGGCGTGCGCCGATTCGGCCGGACGCTT
GATCAGGATCAGCGACACCAGCAGGCGCCGCAGCGGCCAGGGCAGGTCGACCACGTAGGGATCCATGAGGAA
CTGGTCGAGATAGCGGCGGACATCCTCCACCCGGGTCGAATCCGGGGAGCCCAGGTTGAGCAACAGCAGGGC
ATTCTCGGTCATGCCTGA

Translation:

MLQAGAIGLEADPQQDHRAKHRGQGHQQQRVAQRHVVGEDEIGDQRHRRRAHAETEQGDHEQVDRRGLAAHR
VGHDLLDRRRGHAERHAQEEHRRRHQRRRPIGVVQQRIDQGEGNHRPGGEQPDAHVRVAAPALRPVVGQAPA
EDDAETAEHRDDAAVDHPDMTGVPAVGADEEGRHPGAAAVAGEGQAGETEVVAEHGLAVGPQVGADLAQRHR
HACADSAPSRLADRQQQQAEEHAGGAEDEEDQLPRAHLAEQRQVHVALGRGELDHQPAEQEGQPRAQVDAHR
VDADRRRPTLAREAVGDQRIGRWRQRRLADPDADPEGEELPIAARQTAGRGHRAPHQHAEQDQTAPAAVVGH
ASERDTAKGVEQGEGQAHQQAHFRIADGQVTADRADQQVEDLPVDEGQHIGDHEDRHRGPGRKVGGIAVIVV
MHAELLDAAEAADAKGGSTGRISRQHPGLYPGQGTIELLNAGSGFRRMTARSFAAACAQSLSSISRAGRGSG
ADERQMSTSKPSYRAAQRIMNRLSERPGQAPAHLAQGADPGGVVVEAGNQHQVLAAGADELLAAAHADFLQS
LDAVGDERRAHHQQALHPTLHQFVELGVGIGLDPLGAPQARLERHRPAPLLQAGALGEGLGGAQALAAVAEG
EGFGADVAAVLGQQVVGRILHQLADVPLGQAMEAQQQMVVGLLQVRTHAFHQGIEVDRLVVERRQRADLQLQ
AMGGDHPAHLLFGGGRGAVGELWIQRRQGHPPDTAARQVEQDLLDGRLAVAHRQFHRSMRPVRLHRFLQATT
EDDQWRPFVPPDRAVGVRRFGRTLDQDQRHQQAPQRPGQVDHVGIHEELVEIAADILHPGRIRGAQVEQQQG
ILGHA*

AnnotationID:6729 GeneID:6728

AnnotatorUID: diggins

Modification Date/Time: 2005-03-08 06:06:30

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16488

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30542