ViewGene
Locus Name:
GeneID:
Location:

GeneID:6727
TrivialName: PA14_61420
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 22:10:31
LocusName:PA14_61420
PAO1 Ortholog Locus:
Sequence Length:597
Protein Length:198
Start: 5482408
Stop: 5483004
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGGAACCTCGGCAGGCTGTTTTTCCTGTGAGTGTAGAAAAGCAGCAGCCTCTCGCAGAGCGAATAAAGCA
GTCCTGGCCATTCGCCCCCCCCTGTCTCCCTGGCGCTCCGCAATGCGAGAAGGCCCGTATGCCTATCGTCCC
TTGCCACCGCCAGCCGTCATTCGGGTGCTGGCGTTCGCCGACGGGTGGGATTCTTCGGCGGGCCGCGCAACG
AAAAAGCCCGCCgaagGGCGGGCTTTTCACCGCATGGCCGGCTCAGGCGCCCTTGGCCGCCTGCAGCGCTTC
GATGTAGGGCGCGGCCTGGCGCTGGTCGGCGACCAGGGCGACGAAGTCGTTGCCCTTGGCGTCGCGCGCATC
GAGATCGTAGCCGGCCTCGCGGAAGAAGGTGAGGAAGCGCTCAAAGTCGTCGATGCGCAGGCCGCGATAGGC
CTTGATCAGCTTGTGCAGCGAGGGGGGCGTGTCGTCGGCCGGCTCGACGCCGAGGAACAGCTTGATCGACTC
GTCACTGATCTCTTCGCCAATGATCTGTTTCTTGTCTTTGCGCATCGCTTTCTCTCAACGGCTCTGGGGCCG
GGCTCGCCCGGCGCGGGATAA
Translation:
MGTSAGCFSCECRKAAASRRANKAVLAIRPPLSPWRSAMREGPYAYRPLPPPAVIRVLAFADGWDSSAGRAT
KKPAEGRAFHRMAGSGALGRLQRFDVGRGLALVGDQGDEVVALGVARIEIVAGLAEEGEEALKVVDAQAAIG
LDQLVQRGGRVVGRLDAEEQLDRLVTDLFANDLFLVFAHRFLSTALGPGSPGAG*
AnnotationID:6728GeneID:6727
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 22:10:43
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13200




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30540




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49729How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4746088Stop: 4746684

          
Length: 597


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGGAACCTCGGCAGGCTGTTTTTCCTGTGAGTGTAGAAAAGCAGCAGCCTCTCGCAGAGCGAATAAAGCA 
GTCCTGGCCATTCGCCCCCCCCTGTCTCCCTGGCGCTCCGCAATGCGAGAAGGCCCGTATGCCTATCGTCCC 
TTGCCACCGCCAGCCGTCATTCGGGTGCTGGCGTTCGCCGACGGGTGGGATTCTTCGGCGGGCCGCGCAACG 
AAAAAGCCCGCCgaagGGCGGGCTTTTCACCGCATGGCCGGCTCAGGCGCCCTTGGCCGCCTGCAGCGCTTC 
GATGTAGGGCGCGGCCTGGCGCTGGTCGGCGACCAGGGCGACGAAGTCGTTGCCCTTGGCGTCGCGCGCATC 
GAGATCGTAGCCGGCCTCGCGGAAGAAGGTGAGGAAGCGCTCAAAGTCGTCGATGCGCAGGCCGCGATAGGC 
CTTGATCAGCTTGTGCAGCGAGGGGGGCGTGTCGTCGGCCGGCTCGACGCCGAGGAACAGCTTGATCGACTC 
GTCACTGATCTCTTCGCCAATGATCTGTTTCTTGTCTTTGCGCATCGCTTTCTCTCAACGGCTCTGGGGCCG 
GGCTCGCCCGGCGCGGGATAA