ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6724

TrivialName: PA14_61310

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_61310

PAO1 Ortholog Locus:

Sequence Length: 2106

Protein Length: 701

Start: 5474625

Stop: 5472520

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG08229.1|AE004897_7 (AE004897) probable chemotaxis transducer [Pseudomonas aeruginosa PAO1] Identities = 78/279 (27%), Positives = 113/279 (40%), Gaps = 43/279 (15%)

Sequence:

GTGCCTGACCCCGGCCTGACGCTAGACCCTGAACTGATTCACCAGGCGCCGCTGCTGCTCGGCCAGGCGGGT
CAGCTCGGCGCTGGCCTGCGAGGCCTCGTCGGCGCCGCCGGCCACCTGGTTGGCGACCTGGCCGATGTTGGC
GACGTTGCGGTTGATGTCCTCGGCCACCGCGCTCTGCTCCTCGGCGGCGCTGGCGATCTGGGTGTTCATGTC
GTTGATCACCGATACCGCCTGGGTGATCGACTCCAGCGCTTCGGCCGCCTGGCGCGCATGGCGCACGCTGTC
GTCGGTGCGGTCCTGGCTGTCCTGCATGACCTTCACCACGTCGCGGGTGCCCTGCTGCAACTGCTGGATCAT
GCTCTGGATTTCTTCGGTGGCCTGCTGGGTCTTCTGCGCCAGGTTGCGTACCTCGTCGGCCACCACCGCGAA
ACCGCGACCCTGCTCGCCGGCGCGGGCGGCCTCGATGGCGGCGTTGAGGGCGAGCAGGTTGGTCTGCTCGGC
GATACCGCGGATCGCCACCAGGATCGCGTTGATGTTTTCGCTGTCCTTGGCCAGGTTCTGCACCACGCCGAC
CGCGCGGCCGATCTCGCTGGCCAGGGCCTGGATCGCCGCCGAGCTGCTTTCGACGATCTGCTTGCCCTGGTG
CGCGGCCTGGTCCGCGTGGTTGGCTGCCTCGGCGGCGTGGGTGGCGTTGCGCGCCACGTCCTGGGCGGTGGC
GGTCATCTCGTGGACCGCGGTGGCCACCAGTTCGATCTCCGCCAGTTGCTGCTGCACGCCCTGGTTGGTGCG
GATGGCGATGTCGGCGGTGTGCTCCGAGGAGTCGCTGACCTTCTGCACCGATTGCACCACCTGGCCGATCAT
GTTCTGCAGCTTGCCGAGGAAGGTGTTGAAGCCCTTGGCGATGGAGCCCAGCTCGTCGGCGCGCTCGCTGCT
CAGGCGGCGGGTAAGGTCGCCTTCGCCCTGGGCGATGTCGTCGAGCATGCCGACCAGTTGGCGCAGCGGCCG
GGCGATGCCGTAGCCGACCAGCCAGACCACCAGCAGGCCGAGGGCCGCTACCACCAGGCCGGCCAGGCTCAT
GCCGAGGATATCCTGCTGGCGCTGGTCGCTCAGCTCGCCCTGGAGTTGCTGCAGTTCGCCGAATACCGCCGC
CTGGGGAATCTGCAGCATGAGGGTCCAGCGCACGCCGCTGTCGGCGATGGTGAAAGGCAGGAACAGCTCGAT
GTGGCCGTGCTCGGCGTCGATGTCGTAGAGCGGCTGGTCGATCGTGAGGTTCTTCAGGTTGTCCACTTCGTT
GCTGTCGAGGACGCTGCCGGCGGGCTCGCCGAGCTTGCTGTCGTCGCGGGTGTAGGCCACCAGGCGGCCGTT
GCTGGCGATCAGCGCCATTTCCCCGGCGCCATCGTAGAGCTGCTGGTCGGCGCGCTTGAGCAGGTCCTGGAT
GAAGGCCAGCGAGAGGTCGGCGCCGACTGCGCCGCGGAACTGGTCGCCGACCATGATCGGCACGTTGAAGGA
CGACATCATCACGGTCTTGCCGCCCATTTCGTAGGGGGCCGGGTCGATGATGCAGGGACGCTTGTTCTCTTT
CGGACAGGCGTAGAACTCGTTCTCGCGCACCCCGGTGGGCAGCAGCTTTTCGCTATCGATGCTGTCGGCCAT
GGCCTCCACGATCGGCTTGCCGTCGGCGCCGCGATACCACCAGGGCAGGTAGCGGCCGTCCGGGCCGTAGCC
CTTGCCGGGTTGCCCGGCGAAGGCGGCATCGGTATCGAAGGCATTGGCTTCCCAGGCCATGAAGGTGTCGAG
CAGCTTGGGGTTGTTCTGTACGGTGCTGCGCAGCAGCGCGGAGATTTCGTCGCGGCTGGCGTTCAGCTGCGG
CATGCCGTCGGCGCCCGGCTCGCCGAGCAGGCGGGTGCTGTTGGCCAGGCCGTGGACCACCGTCAGCGGATA
CTCCAGCTCGCGCTGGATCTGGCTGACCTGGGCGCGGGCCAGGGCCACCAGGCGCTCGTTGATGACCTTCTC
CAACAGGCCCTGGGTGCGTTGCTGCACCAGCTCCTGCGTTCGCGCGCCGGCGAACAGGGCGTACAGCACCAG
CACCACGACGACGCTTAG

Translation:

MPDPGLTLDPELIHQAPLLLGQAGQLGAGLRGLVGAAGHLVGDLADVGDVAVDVLGHRALLLGGAGDLGVHV
VDHRYRLGDRLQRFGRLARMAHAVVGAVLAVLHDLHHVAGALLQLLDHALDFFGGLLGLLRQVAYLVGHHRE
TATLLAGAGGLDGGVEGEQVGLLGDTADRHQDRVDVFAVLGQVLHHADRAADLAGQGLDRRRAAFDDLLALV
RGLVRVVGCLGGVGGVARHVLGGGGHLVDRGGHQFDLRQLLLHALVGADGDVGGVLRGVADLLHRLHHLADH
VLQLAEEGVEALGDGAQLVGALAAQAAGKVAFALGDVVEHADQLAQRPGDAVADQPDHQQAEGRYHQAGQAH
AEDILLALVAQLALELLQFAEYRRLGNLQHEGPAHAAVGDGERQEQLDVAVLGVDVVERLVDREVLQVVHFV
AVEDAAGGLAELAVVAGVGHQAAVAGDQRHFPGAIVELLVGALEQVLDEGQREVGADCAAELVADHDRHVEG
RHHHGLAAHFVGGRVDDAGTLVLFRTGVELVLAHPGGQQLFAIDAVGHGLHDRLAVGAAIPPGQVAAVRAVA
LAGLPGEGGIGIEGIGFPGHEGVEQLGVVLYGAAQQRGDFVAAGVQLRHAVGARLAEQAGAVGQAVDHRQRI
LQLALDLADLGAGQGHQALVDDLLQQALGALLHQLLRSRAGEQGVQHQHHDDA*

AnnotationID:6725 GeneID:6724

AnnotatorUID: diggins

Modification Date/Time: 2005-05-06 13:01:07

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

>gb|AAG08229.1|AE004897_7 (AE004897) probable chemotaxis transducer [Pseudomonas aeruginosa
           PAO1]
          Length = 657

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 78/279 (27%), Positives = 113/279 (40%), Gaps = 43/279 (15%)

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16484

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30534