ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6719

TrivialName: PA14_61100

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_61100

PAO1 Ortholog Locus:

Sequence Length: 1647

Protein Length: 548

Start: 5448449

Stop: 5450095

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70255.1| (AP005031) hypothetical protein [Streptomyces avermitilis MA-4680] Identities = 84/260 (32%), Positives = 106/260 (40%), Gaps = 35/260 (13%)

Sequence:

GTGGATCGTCGGCAACCGCCACCTGGGCTACCACGCCAAGCTCAAGCGGCTGTTCCGCGGGGTCGAGCAGGT
CGCGGCGAATCCGAAGTTCGTGATCCTGAAAGCGGGAAAATAGTCAGCCGAGCGCCGCCGGGGTGTCCACGT
CGCGGAGTACGCCCGGATCGTCGCACGGTACCTCGCGCCAGGCCGGACGATGGGCCAGCAGCACGCGGCGCG
CGCCCTGGTCGCCGTCCAGTTGTGCAAGCGCGTCCCAGAAAGCGCGGCCGAACAGCACCGGATGACCGCGCT
GGCCGTCGTACAGGGGAAACACGATGGCTTCGGGAGTGGCCATCGCGGCCAGACGCTCGAGGGTATCGGCGG
CGATCCAGGGCATGTCGCCGAGCAGGACGGCGATGGCCCGGGCCGGGCTGTTCCTCGCCGCCGCGACGCCGG
CGGCCAGGCTGTGGCCCATGCCCGACGAGGCGTCGAGGCTGTGGACAAGCCGCTGTTGCGCCGGCAGGCCCA
GGCTCGCCGGGGTCTCTCCGGCACGCACCACCACCCGCACCTCGGCGAACGCCTCGCGCGCCCGCGCCACGC
TGGCCGCCAGCAGGGTCGTGCCATCAGCCAGCCGCGCCAGGCGCTTGTCGCTGCCGAAGCGGCGCCCCTGCC
CGGCCGCCAGGACCAGGCACAGCACCTCGTCGGCGGCGACCATCAGAGCCGCTCGCGGGGAATGCCGTTGCG
GATGCGAAGAATGTCCGCCAGCACCGCCAGGGCGATTTCCGCCGGCGTCTTGCTCCCCAGGTTGAGGCCGAT
CGGCGCGTGGATCCGCGCCAGTTCGGCGTCGCCCAGGCCGCCGATGCGCCGCAGGCGCTCGAAGCGTTTCTC
CGAGGTCGCCCGCGACCCCATCACGCCGATATAGAAAGCTTCGGTACGCACCGCCTCGAGCATCGCCAGGTC
GTCGATCTTCGGATCGTGGGTCAACGCCACCACCGCCGTATCGGCGTGGCAACCGCCGTCGGCGATGAACAG
CGAGGGCAGCTCGCGACGGATCTCGATCCCCTCCAGCAGCACGCCGCGCAAGGCTTCTTCGCGCGGGTCGCA
GAGGATCACCTCGAAGCCCAGGCCCTTGCCGAACTCGGCGCAGGCATGGGCGACGCTGGAATAGCCGGCCAG
CAACAGGCGCTGGGCGGCACCGACGCGCAGGCGCACGCGCTCGCCGTCGCGTTCCGCCCGTGGGCCGTGGCT
GGAATCGTCGCGCAGGCTGCGCGCGCCGCTGCCCAGCTCGACCTCGCGGAGCAGGCGGCGCTGGCCAAGCAA
CGCCGACTCCAGCTCGCGCAGATGGGCCTGGACGTCGCAGTCCGGCGCCAGGTTTTCCACCAGTACGTCGAG
GATGCCGCCGCAGGGCAGGCGCACGTTCGAGTTCGGGTCGTCACCCTCGCCGTAGCGCACGATCACCGCGGG
ATCGGGGAAACCGCCTGCGGCGACCCGTTCGAGGAAATCATCCTCGACGCAGCCGCCGGACAGCGAGCCGAT
CCAGTGGCCGTTGGCGTTCACCGCCAGCAGCGATCCCGGCGCACGGGGCGCCGAGCCGTAGGTCGTGAGCAC
GGTACAGAACCACACCCGTTCGCCGCCCACGGACCACTTCAGCGCCTGGCGGACCACCTGTAG

Translation:

MDRRQPPPGLPRQAQAAVPRGRAGRGESEVRDPESGKIVSRAPPGCPRRGVRPDRRTVPRARPDDGPAARGA
RPGRRPVVQARPRKRGRTAPDDRAGRRTGETRWLREWPSRPDARGYRRRSRACRRAGRRWPGPGCSSPPRRR
RPGCGPCPTRRRGCGQAAVAPAGPGSPGSLRHAPPPAPRRTPRAPAPRWPPAGSCHQPAAPGACRCRSGAPA
RPPGPGTAPRRRRPSEPLAGNAVADAKNVRQHRQGDFRRRLAPQVEADRRVDPRQFGVAQAADAPQALEAFL
RGRPRPHHADIESFGTHRLEHRQVVDLRIVGQRHHRRIGVATAVGDEQRGQLATDLDPLQQHAAQGFFARVA
EDHLEAQALAELGAGMGDAGIAGQQQALGGTDAQAHALAVAFRPWAVAGIVAQAARAAAQLDLAEQAALAKQ
RRLQLAQMGLDVAVRRQVFHQYVEDAAAGQAHVRVRVVTLAVAHDHRGIGETACGDPFEEIILDAAAGQRAD
PVAVGVHRQQRSRRTGRRAVGREHGTEPHPFAAHGPLQRLADHL*

AnnotationID:6720 GeneID:6719

AnnotatorUID: danlee

Modification Date/Time: 2005-07-29 12:12:54

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 4

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:16480

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30524

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:31606

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 6719_cdd.html

URL:

GC ORFID: `49721`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `4712129`	Stop: `4713775`
Length: `1647`
Start Codon: `GTG`	Truncated Start:
Stop Codon: `TAG`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGATCGTCGGCAACCGCCACCTGGGCTACCACGCCAAGCTCAAGCGGCTGTTCCGCGGGGTCGAGCAGGT CGCGGCGAATCCGAAGTTCGTGATCCTGAAAGCGGGAAAATAGTCAGCCGAGCGCCGCCGGGGTGTCCACGT CGCGGAGTACGCCCGGATCGTCGCACGGTACCTCGCGCCAGGCCGGACGATGGGCCAGCAGCACGCGGCGCG CGCCCTGGTCGCCGTCCAGTTGTGCAAGCGCGTCCCAGAAAGCGCGGCCGAACAGCACCGGATGACCGCGCT GGCCGTCGTACAGGGGAAACACGATGGCTTCGGGAGTGGCCATCGCGGCCAGACGCTCGAGGGTATCGGCGG CGATCCAGGGCATGTCGCCGAGCAGGACGGCGATGGCCCGGGCCGGGCTGTTCCTCGCCGCCGCGACGCCGG CGGCCAGGCTGTGGCCCATGCCCGACGAGGCGTCGAGGCTGTGGACAAGCCGCTGTTGCGCCGGCAGGCCCA GGCTCGCCGGGGTCTCTCCGGCACGCACCACCACCCGCACCTCGGCGAACGCCTCGCGCGCCCGCGCCACGC TGGCCGCCAGCAGGGTCGTGCCATCAGCCAGCCGCGCCAGGCGCTTGTCGCTGCCGAAGCGGCGCCCCTGCC CGGCCGCCAGGACCAGGCACAGCACCTCGTCGGCGGCGACCATCAGAGCCGCTCGCGGGGAATGCCGTTGCG GATGCGAAGAATGTCCGCCAGCACCGCCAGGGCGATTTCCGCCGGCGTCTTGCTCCCCAGGTTGAGGCCGAT CGGCGCGTGGATCCGCGCCAGTTCGGCGTCGCCCAGGCCGCCGATGCGCCGCAGGCGCTCGAAGCGTTTCTC CGAGGTCGCCCGCGACCCCATCACGCCGATATAGAAAGCTTCGGTACGCACCGCCTCGAGCATCGCCAGGTC GTCGATCTTCGGATCGTGGGTCAACGCCACCACCGCCGTATCGGCGTGGCAACCGCCGTCGGCGATGAACAG CGAGGGCAGCTCGCGACGGATCTCGATCCCCTCCAGCAGCACGCCGCGCAAGGCTTCTTCGCGCGGGTCGCA GAGGATCACCTCGAAGCCCAGGCCCTTGCCGAACTCGGCGCAGGCATGGGCGACGCTGGAATAGCCGGCCAG CAACAGGCGCTGGGCGGCACCGACGCGCAGGCGCACGCGCTCGCCGTCGCGTTCCGCCCGTGGGCCGTGGCT GGAATCGTCGCGCAGGCTGCGCGCGCCGCTGCCCAGCTCGACCTCGCGGAGCAGGCGGCGCTGGCCAAGCAA CGCCGACTCCAGCTCGCGCAGATGGGCCTGGACGTCGCAGTCCGGCGCCAGGTTTTCCACCAGTACGTCGAG GATGCCGCCGCAGGGCAGGCGCACGTTCGAGTTCGGGTCGTCACCCTCGCCGTAGCGCACGATCACCGCGGG ATCGGGGAAACCGCCTGCGGCGACCCGTTCGAGGAAATCATCCTCGACGCAGCCGCCGGACAGCGAGCCGAT CCAGTGGCCGTTGGCGTTCACCGCCAGCAGCGATCCCGGCGCACGGGGCGCCGAGCCGTAGGTCGTGAGCAC GGTACAGAACCACACCCGTTCGCCGCCCACGGACCACTTCAGCGCCTGGCGGACCACCTGTAG