ViewGene

Locus Name:
GeneID:
Location:

GeneID:6717
TrivialName: PA14_61030
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_61030
PAO1 Ortholog Locus:
Sequence Length:1686
Protein Length:561
Start: 5442637
Stop: 5444322
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGATCAATCCTGGAGCTTCGCCGCCAGTTGCCGGACGCGCTGCAGATCGGCTCCAGCCACCTTGGCCAG
GCCCGTACCGTAGTCGCTGTCAGCCTTGTAGAAGTAGGAAAGCATGATGTACTTGCTCTCGTCGTCGGTGAT
CGCCAACGCCCCGCCGAGACTGGCGATCAGGTCGGCCTGGTCCTTCTTGCCGTAGGAGCGGAACAGCTCGCC
GGTCTGCTTGAAGTTCTGCTCGCGCTGGATCTTCGCCTGCTGGGTGGTGCCGCTCAGCGGGGTCCGCACGTA
GCGGGCGCTGGCCTGCTCCTCGCGCGGATCGAGCCGGCTCGGCTGGTAGTTCACCCCGCTGGTACTGTGTCC
GGCGTTCAGCGCGCCGTCCTGGTTGACGGTATTGACCTCGCTGCGCGGGCGGTTGACCGGCAGGCCCAGGCC
GTTGGCGCCGACCCGGTACATCTGGGTGTCGGCGTAGGCGAACAGCCGTCCCTGGAGCAGGCGATCCTCGGA
GGGCTCGATGCCCGGCACCAGGTTCGACGGCGCCATGGCGACCTGTTCGGTTTCCTGGAAGAAGTTGTCGAC
GTTGCGGTTCAGCACCATCTGGCCGATCTTGCGCTCGGGAATGCCCGGCCAGATCTTGGTCGCGTCCAGCGG
ATCGAAGTCGAATTTCGCCAGGTCCTCGGGCTTGAGCACCTGGATGTACAGGTCCCATTTCGGGAAGTCGCC
CTTCCGGATCGCGCTCACCAGGTCATTGGTCATGTGGCTGTAGTCGCGACCCTGGACTTCCGCCACCTGCTT
CGGATCGAGGTTCTTCTGGCCCTGCAGGCTCTTCCAGTGGAACTTCACGTAGTGCACTTCGCCCCTGGCGTT
GACCAGCTTGTAGGCATGCACGCTGTTGCCGTCCATTTCCCGGTAGCTGGCCGGGGTGCCCTCGTTGGAATA
CAGCAGGGTCAGGGTGCGGGTCGCCTCCGGCACGTGGGAGAAGAAATCGAAGCGTCGCGAGTCGTCGTCGAG
GTTGCTGCGCGGGTCCGGCTTGAAGGCATGGACCATGTCCGGGAACTTGATCGCATCGCGGATGAAGAAGGT
CGGGAAGTTGTTGCCCACCAGGTCCCAATTGCCGTCTGCGGTATAGAACTTGGTGGCGAAACCGCGCGGATC
GCGCAGGGTTTCCGGGGAGTGGTTGCCGTGCACCACAGCGGAGAAGCGCACGAATACCGGGGTCTTCTCGCC
CTTGCGGAAGACCTTGGCCATGCTCAGGTCGCTGATATCGGCGCTGGCGACGAACTCGCCATGGGCGCCGGT
GCCGCGGGCATGCACCACGCGTTCGGGAATGCGCTCGCGGTCGAAACGTTGCAACTTCTGCAGCAGTTGCAC
GTCCTGCAGCAGCACCGAACCGTTGGGCCCGGCGGTCTGCGAGTTCTGGTTGTCGCCCACTGGCGCACCGTT
GTCACGGGTCAGGGTCGCGGCCTGTACGGACAGCGACAGGAGGCTGGCGGTCAGGCTTGCCGCCACCAGCAG
GCGGCCGGGACGGAAGGCGTTCAGGGAAGGGTTCATGGAAGAGCTCCTAATGGCTTGTCAGGCGTCTTGTTG
CGCCCGACCAAGGTAAGGAGCGCCGCCGGCGACGCTAAATTGAAAAACCTCACCGCGCCGATTAGGAATATC
AATGCGCCCATAAATCGCAAAAAGAAATAA
Translation:
MRSILELRRQLPDALQIGSSHLGQARTVVAVSLVEVGKHDVLALVVGDRQRPAETGDQVGLVLLAVGAEQLA
GLLEVLLALDLRLLGGAAQRGPHVAGAGLLLARIEPARLVVHPAGTVSGVQRAVLVDGIDLAARAVDRQAQA
VGADPVHLGVGVGEQPSLEQAILGGLDARHQVRRRHGDLFGFLEEVVDVAVQHHLADLALGNARPDLGRVQR
IEVEFRQVLGLEHLDVQVPFREVALPDRAHQVIGHVAVVATLDFRHLLRIEVLLALQALPVELHVVHFAPGV
DQLVGMHAVAVHFPVAGRGALVGIQQGQGAGRLRHVGEEIEASRVVVEVAARVRLEGMDHVRELDRIADEEG
REVVAHQVPIAVCGIELGGETARIAQGFRGVVAVHHSGEAHEYRGLLALAEDLGHAQVADIGAGDELAMGAG
AAGMHHAFGNALAVETLQLLQQLHVLQQHRTVGPGGLRVLVVAHWRTVVTGQGRGLYGQRQEAGGQACRHQQ
AAGTEGVQGRVHGRAPNGLSGVLLRPTKVRSAAGDAKLKNLTAPIRNINAPINRKKK*
AnnotationID:6718GeneID:6717
AnnotatorUID: diggins
Modification Date/Time: 2005-05-06 07:07:23
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:4
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16476
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30520
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49719How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4706317Stop: 4708002
Length: 1686
Start Codon: TTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGATCAATCCTGGAGCTTCGCCGCCAGTTGCCGGACGCGCTGCAGATCGGCTCCAGCCACCTTGGCCAG
GCCCGTACCGTAGTCGCTGTCAGCCTTGTAGAAGTAGGAAAGCATGATGTACTTGCTCTCGTCGTCGGTGAT
CGCCAACGCCCCGCCGAGACTGGCGATCAGGTCGGCCTGGTCCTTCTTGCCGTAGGAGCGGAACAGCTCGCC
GGTCTGCTTGAAGTTCTGCTCGCGCTGGATCTTCGCCTGCTGGGTGGTGCCGCTCAGCGGGGTCCGCACGTA
GCGGGCGCTGGCCTGCTCCTCGCGCGGATCGAGCCGGCTCGGCTGGTAGTTCACCCCGCTGGTACTGTGTCC
GGCGTTCAGCGCGCCGTCCTGGTTGACGGTATTGACCTCGCTGCGCGGGCGGTTGACCGGCAGGCCCAGGCC
GTTGGCGCCGACCCGGTACATCTGGGTGTCGGCGTAGGCGAACAGCCGTCCCTGGAGCAGGCGATCCTCGGA
GGGCTCGATGCCCGGCACCAGGTTCGACGGCGCCATGGCGACCTGTTCGGTTTCCTGGAAGAAGTTGTCGAC
GTTGCGGTTCAGCACCATCTGGCCGATCTTGCGCTCGGGAATGCCCGGCCAGATCTTGGTCGCGTCCAGCGG
ATCGAAGTCGAATTTCGCCAGGTCCTCGGGCTTGAGCACCTGGATGTACAGGTCCCATTTCGGGAAGTCGCC
CTTCCGGATCGCGCTCACCAGGTCATTGGTCATGTGGCTGTAGTCGCGACCCTGGACTTCCGCCACCTGCTT
CGGATCGAGGTTCTTCTGGCCCTGCAGGCTCTTCCAGTGGAACTTCACGTAGTGCACTTCGCCCCTGGCGTT
GACCAGCTTGTAGGCATGCACGCTGTTGCCGTCCATTTCCCGGTAGCTGGCCGGGGTGCCCTCGTTGGAATA
CAGCAGGGTCAGGGTGCGGGTCGCCTCCGGCACGTGGGAGAAGAAATCGAAGCGTCGCGAGTCGTCGTCGAG
GTTGCTGCGCGGGTCCGGCTTGAAGGCATGGACCATGTCCGGGAACTTGATCGCATCGCGGATGAAGAAGGT
CGGGAAGTTGTTGCCCACCAGGTCCCAATTGCCGTCTGCGGTATAGAACTTGGTGGCGAAACCGCGCGGATC
GCGCAGGGTTTCCGGGGAGTGGTTGCCGTGCACCACAGCGGAGAAGCGCACGAATACCGGGGTCTTCTCGCC
CTTGCGGAAGACCTTGGCCATGCTCAGGTCGCTGATATCGGCGCTGGCGACGAACTCGCCATGGGCGCCGGT
GCCGCGGGCATGCACCACGCGTTCGGGAATGCGCTCGCGGTCGAAACGTTGCAACTTCTGCAGCAGTTGCAC
GTCCTGCAGCAGCACCGAACCGTTGGGCCCGGCGGTCTGCGAGTTCTGGTTGTCGCCCACTGGCGCACCGTT
GTCACGGGTCAGGGTCGCGGCCTGTACGGACAGCGACAGGAGGCTGGCGGTCAGGCTTGCCGCCACCAGCAG
GCGGCCGGGACGGAAGGCGTTCAGGGAAGGGTTCATGGAAGAGCTCCTAATGGCTTGTCAGGCGTCTTGTTG
CGCCCGACCAAGGTAAGGAGCGCCGCCGGCGACGCTAAATTGAAAAACCTCACCGCGCCGATTAGGAATATC
AATGCGCCCATAAATCGCAAAAAGAAATAA