ViewGene
Locus Name:
GeneID:
Location:

GeneID:6714
TrivialName: PA14_60910
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_60910
PAO1 Ortholog Locus:
Sequence Length:1161
Protein Length:386
Start: 5434872
Stop: 5436032
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCACTCCCGCCAGGCGCCGATCAATGCGTCCCTGTCCATTTCCACGCTCCTCGCCTCAGCGGCCTTCGAC
GATGCGCTCGAAGCCCTCGCGGATACTGTCCTCCGGCAGGTTGTCGCCGATGAACACGATCACACTCTCGCG
CGCCTCGTCGTCCCGCCACTCGCTATCCCAGTCGAAGCCGTAGAGTCGCAGCACGCCCTGGAACACCAGGCG
ACGCGGCTCGTCGGCGATGTTCAGCACGCCCTTGTAGCGCAGCAGGGAATTGCCATGCCACTGCAACAGGTC
ATCCATGAACTCGCTCAGCCTTTCGAGATCGAGCGGCGTGTCGCTGCGCAGTACCAGGGTGCCGATGCGATC
GCTGCTGTCCTTGGCTGCCACCGCTCGCAGCGGGCGCAGGCCGATGCCAGGACCGAGGTCGGCGTTGAGGTT
GAAGCCACGTACGTCGAGCAGGTGCGCCAGGTCGATGCGACCGTGCTCGACCACATGCACCAGCGCCCTCCG
GTTGATCCGTTGCAGGCGCTGGCCCAGGGCCTCGAAGGTGGCGGCGTCGACCAGGTCGGTCTTGCTCACCAG
GATGCGGTCGGCAAAGCCGACCTGGGCCTGGGCGATGGTTTCCTGCAGGTGACGCTCGGCGTTGGCGGCGTC
CACCAGGGTGATGATGCCGTCCAGCACGTAGCGCTGGCAGAGTTCCTCGTCGGCGAAGAAGGTCTGCGCCAC
CGGCGCCGGATCGGCCAGGCCGGTGCACTCGATCACCAGGCGGTCGAAGTCGATTTCGCCGTTGTCGCGGCG
CTCCAGCAGGAGGAACAGGGCCTTTTCCAGGTCGGTGTTGATCGAGCAGCAGACGCAGCCGTTGGACAACGT
CATCACCTGCACCGGCTCGACGCCGAGCAACTGGCCGTCGATCGGTGTCTCGCTGTACTCGTTCTCGATCAC
CGCGATCTTCATGCCGTGCTCGGCCTGCAGCAGGTACTTGAGCAGGGTGGTCTTGCCGGCGCCGAGGAAGCC
GGTGAGCACGGTGACGGGGATCGGGGCGTGGTTGTCGTTGGCTACTTCGGACATGCGCAACTTCCAGAAAAG
ACGCGGGCCACGTCAGACGTGGCCCGCGGAAGGATGGGGATTCAGCAGCAGCGGATCGGCCGACCCTTGCCG
CCACCGTAG
Translation:
MHSRQAPINASLSISTLLASAAFDDALEALADTVLRQVVADEHDHTLARLVVPPLAIPVEAVESQHALEHQA
TRLVGDVQHALVAQQGIAMPLQQVIHELAQPFEIERRVAAQYQGADAIAAVLGCHRSQRAQADARTEVGVEV
EATYVEQVRQVDATVLDHMHQRPPVDPLQALAQGLEGGGVDQVGLAHQDAVGKADLGLGDGFLQVTLGVGGV
HQGDDAVQHVALAEFLVGEEGLRHRRRIGQAGALDHQAVEVDFAVVAALQQEEQGLFQVGVDRAADAAVGQR
HHLHRLDAEQLAVDRCLAVLVLDHRDLHAVLGLQQVLEQGGLAGAEEAGEHGDGDRGVVVVGYFGHAQLPEK
TRATSDVARGRMGIQQQRIGRPLPPP*
AnnotationID:6715GeneID:6714
AnnotatorUID: diggins
Modification Date/Time: 2005-05-06 07:07:56
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits at any threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13176




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30514




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49716How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4698552Stop: 4699712

          
Length: 1161


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGCACTCCCGCCAGGCGCCGATCAATGCGTCCCTGTCCATTTCCACGCTCCTCGCCTCAGCGGCCTTCGAC 
GATGCGCTCGAAGCCCTCGCGGATACTGTCCTCCGGCAGGTTGTCGCCGATGAACACGATCACACTCTCGCG 
CGCCTCGTCGTCCCGCCACTCGCTATCCCAGTCGAAGCCGTAGAGTCGCAGCACGCCCTGGAACACCAGGCG 
ACGCGGCTCGTCGGCGATGTTCAGCACGCCCTTGTAGCGCAGCAGGGAATTGCCATGCCACTGCAACAGGTC 
ATCCATGAACTCGCTCAGCCTTTCGAGATCGAGCGGCGTGTCGCTGCGCAGTACCAGGGTGCCGATGCGATC 
GCTGCTGTCCTTGGCTGCCACCGCTCGCAGCGGGCGCAGGCCGATGCCAGGACCGAGGTCGGCGTTGAGGTT 
GAAGCCACGTACGTCGAGCAGGTGCGCCAGGTCGATGCGACCGTGCTCGACCACATGCACCAGCGCCCTCCG 
GTTGATCCGTTGCAGGCGCTGGCCCAGGGCCTCGAAGGTGGCGGCGTCGACCAGGTCGGTCTTGCTCACCAG 
GATGCGGTCGGCAAAGCCGACCTGGGCCTGGGCGATGGTTTCCTGCAGGTGACGCTCGGCGTTGGCGGCGTC 
CACCAGGGTGATGATGCCGTCCAGCACGTAGCGCTGGCAGAGTTCCTCGTCGGCGAAGAAGGTCTGCGCCAC 
CGGCGCCGGATCGGCCAGGCCGGTGCACTCGATCACCAGGCGGTCGAAGTCGATTTCGCCGTTGTCGCGGCG 
CTCCAGCAGGAGGAACAGGGCCTTTTCCAGGTCGGTGTTGATCGAGCAGCAGACGCAGCCGTTGGACAACGT 
CATCACCTGCACCGGCTCGACGCCGAGCAACTGGCCGTCGATCGGTGTCTCGCTGTACTCGTTCTCGATCAC 
CGCGATCTTCATGCCGTGCTCGGCCTGCAGCAGGTACTTGAGCAGGGTGGTCTTGCCGGCGCCGAGGAAGCC 
GGTGAGCACGGTGACGGGGATCGGGGCGTGGTTGTCGTTGGCTACTTCGGACATGCGCAACTTCCAGAAAAG 
ACGCGGGCCACGTCAGACGTGGCCCGCGGAAGGATGGGGATTCAGCAGCAGCGGATCGGCCGACCCTTGCCG 
CCACCGTAG