ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6710

TrivialName: PA14_60720

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_60720

PAO1 Ortholog Locus:

Sequence Length: 1254

Protein Length: 417

Start: 5409996

Stop: 5411249

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD66603.1| (AJ543650) SMC protein [Rhodobacter sphaeroides] Identities = 55/184 (29%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Sequence:

ATGGTGGATCGACTGCATGATGCCGTGCAGCTTGGTATCCACCTCGCCCTCGCTCCAACGCAGGCGCATGGC
GTTCTGCGACATCTCCAGACCGCTCACCGCCACCCCGCCGGCGTTCGACGCCTTGCCCGGCGCGTAGAGGAT
GCCGGCCTCGAGGAACAGGTCGACGGCTTCCAGGGTCGAGGGCATGTTGGCGCCTTCGGCGACACAGACGCA
GCCGTTGGCCAGCAGGCGCCGCGCATCCTCGGCATCCAGTTCGTTCTGGGTCGCGCAGGGCAGCGCGATATC
GCAGGCCAGGCCCCAGGGCCGGCGCCCTTCGAGGAACTGCAGGGAAAACTGCTCCGCCATCTCGCGGATGCG
CCCGCGGCGCACGTTCTTCAGCTCCATCAGGTATTCCCACTGCTCGTCGGAGAGCCCCGCCTCGGCATACAG
GGTGCCTTCGGAGTCGGACAGCGAGATCACCTTGCCGCCCATTTCCATGACCTTGCGCGCCGCGTACTGGGC
GACGTTGCCCGAGCCGGAGATCGCCACCCGCTGGCCGTCGAAGCCGCGGCCACGATCCTTGAGCATTTCCTG
GGCGAAGTAGACGCAGCCGAAGCCGGTCGCCTCCGGGCGGATCAGGCTGCCGCCGTAGCTCAGGCCCTTGCC
GGTCAGCACCGAGGTGAACTGGTTGGACAGGCGCTTGTACTGGCCGAACAGGTAGCCGATCTCACGCGCGCC
GACGCCGATGTCGCCGGCCGGCACGTCCAGGTCGGCGCCGACGTGGCGGTACAGCTCGCTCATGAACGACTG
GCAGAAACGCATCACCTCGGCGTCGCTCTTGCCCTTCGGATCGAAGTCGGAGCCGCCCTTGCCGCCGCCCAT
GGGCAGAGTGGTCAGGGAGTTCTTGAAGACCTGCTCGAAGGCGAGGAACTTCAGCACCCCGAGGTTGACCGA
GGGATGGAAGCGCAGGCCGCCCTTGTAGGGGCCGATGGCGCTGCTCATCTGCACCCGGTAGCCACGGTTGAC
CCGTACCCGGCCCTGGTCGTCGACCCAGGGTACGCGGAACAGGATCGCCCGCTCGGGTTCGACGATGCGTTC
GATGATGCCGGCTTCCAGGTAGTGCGGGTTGGCCTCGAGGAACGGCCAGAGGGAACGCAGCACCTCTTCCAC
CGCCTGGTGGAATTCGGGCTGATCGGGATCGCGCCGCTTCAGGCGCTCGAGGAAAGCGTCGACGGATTGCGT
CATTTTTCTCACCGGTTTCTAGTTTTGTGA

Translation:

MVDRLHDAVQLGIHLALAPTQAHGVLRHLQTAHRHPAGVRRLARRVEDAGLEEQVDGFQGRGHVGAFGDTDA
AVGQQAPRILGIQFVLGRAGQRDIAGQAPGPAPFEELQGKLLRHLADAPAAHVLQLHQVFPLLVGEPRLGIQ
GAFGVGQRDHLAAHFHDLARRVLGDVARAGDRHPLAVEAAATILEHFLGEVDAAEAGRLRADQAAAVAQALA
GQHRGELVGQALVLAEQVADLTRADADVAGRHVQVGADVAVQLAHERLAETHHLGVALALRIEVGAALAAAH
GQSGQGVLEDLLEGEELQHPEVDRGMEAQAALVGADGAAHLHPVATVDPYPALVVDPGYAEQDRPLGFDDAF
DDAGFQVVRVGLEERPEGTQHLFHRLVEFGLIGIAPLQALEESVDGLRHFSHRFLVL*

AnnotationID:6711 GeneID:6710

AnnotatorUID: diggins

Modification Date/Time: 2005-05-06 05:05:10

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13169

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30507