ViewGene

Locus Name:
GeneID:
Location:

GeneID:6708
TrivialName: PA14_60640
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_60640
PAO1 Ortholog Locus:
Sequence Length:1746
Protein Length:581
Start: 5406766
Stop: 5405021
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGATGGCGGCTGCCAGGTACGGAGTGAAAGGCGTTGCCCAGCCAGAGCAGTTCCTCGCGCACGCCAGGCTC
TTCCCGATACACCAGCGGCGAGCCGAGCCACTCCAGCAGGGCCGGGTTGGATTTGCGCATCAGGCGCAACGC
CTTGCGCAGCTCCCAGCCGCTGATGTCCAGCTCGTCGCTCAGCGGGCGTTCTATCACGTCGCGAGGTTCCTC
GACGCGCTGATACCACTCGGGCTGATGCACATAGACGAAGCGTACGTCATAGTCGCTGTCCGGCGAAGCGAA
GCCCCAGGCCCGGCTGCCCGACTCGCAGGCGTAGAGCACGACTACGTCGTGCTCGCGTTCGATCCGTTCCAG
CTCATCCAGTACCCGCTCGCGCATGGCGGCGGGGAGCGGATGGCGTTCTTCCCTGTTCATTTCGATTCTTCC
CCAGCGGGCGCCACAGGGCGCCCGTCATCCTTTCACGCACACCACCTGACGCAGGGTGTGCAGCACTTCCAC
CAGCTCGCGCTGGGCTTCCATGACCCGGTCGATGTCCTTGTAGGCCATCGGGATCTCGTCGATCACGTCGGC
GTCCTTGCGGCATTCGACGTGGGCGGTGGCGCGGGCCTGGTCGGCGACGCTGAAGACCTTCTTCGCCTTGGT
CCGGCTCATGGTCCGCCCGGCGCCGTGGCTGCACGAGCAGAACGCTTCCTGGTTGCCGAGGCCGCGGACAAT
GAAGCTCTTCGCCCCCATCGAGCCGGGAATGATGCCGAGCTGGCCCTTCTGCGCGGACACCGCGCCTTTGCG
GGTGACCAGTACCTCCTGGCCGAAGTGGCGCTCCTTCTGCACGTAGTTATGGTGGCAATCGACCGCCTCCAG
GTTGGCTTCGAACGGCTTGCGGATCACCTGGCGCGCCGCCTCGATCACCGCGTGCATCATCAGCGCGCGGTT
CTGCCGGGCGAAATCCTGGGCCCAGCCGACCGCTTCCACATAGTCGTCGAAGTGCCGGCTGCCTTCCTCGAA
GTAGGCCAGGTCCTTGTCCGGCAGGTTGGCGATGTGCTGGCGCATGTCCGCCTTGGCCAGTTCGATGAACAG
GTTGCCGATGGCGTTGCCGACCCCGCGCGAACCGCTGTGCAGCATGAACCAGACGCGGTCGGCCTCGTCCAG
GCAGACCTCGATGAAGTGGTTGCCGGTGCCGAGGGTTCCCAGGTGCTGGCGGTTGTTGGTCTTCTCCAGCCT
CGGGTGCTTGTCGGTGATCGCCTTGAAGCGATCGGCGAGCGCCTTCCAGGCCTGGTCGGCGGCCTCCGGTAC
CTCGTGCCAGGCGCCGCGGTCGCGGCGGCCGAAGGTCTTGCCGTGGGGTACCGCCTGCTCGATGGCGCTGCG
CAGGCCGTGCAGGTTGTCCGGCAGGTCGGCGGCGACCAGCGAGGTGCGCGCGGCGATCATTCCGCAGCCGAT
ATCCACGCCCACCGCGGCCGGGATGATCGCGCCGAGGGTAGGGATCACGCTACCGATGGTCGAGCCCTTGCC
CAGGTGTACGTCAGGCATCACCGCCAGGTGCTTGAAGATGAAGGGCATCTTCGCCGTGTTCAGCAACTGCTG
GCGCGCTTCCTCCTCCACCGGGACGCCCTGGGTCCAGAGCTTGATCGGCTTGCCGCCGGCCACTTCGAGGAT
ATTCATGTCTTTCATCGTGCTTTCCTTGTGCTCCGCGCCGTCTTGTCGACGGCGCGGCTATCGTTCGTGATC
AGGCCTGCTTCAGCGTGA
Translation:
MMAAARYGVKGVAQPEQFLAHARLFPIHQRRAEPLQQGRVGFAHQAQRLAQLPAADVQLVAQRAFYHVARFL
DALIPLGLMHIDEAYVIVAVRRSEAPGPAARLAGVEHDYVVLAFDPFQLIQYPLAHGGGERMAFFPVHFDSS
PAGATGRPSSFHAHHLTQGVQHFHQLALGFHDPVDVLVGHRDLVDHVGVLAAFDVGGGAGLVGDAEDLLRLG
PAHGPPGAVAARAERFLVAEAADNEALRPHRAGNDAELALLRGHRAFAGDQYLLAEVALLLHVVMVAIDRLQ
VGFERLADHLARRLDHRVHHQRAVLPGEILGPADRFHIVVEVPAAFLEVGQVLVRQVGDVLAHVRLGQFDEQ
VADGVADPARTAVQHEPDAVGLVQADLDEVVAGAEGSQVLAVVGLLQPRVLVGDRLEAIGERLPGLVGGLRY
LVPGAAVAAAEGLAVGYRLLDGAAQAVQVVRQVGGDQRGARGDHSAADIHAHRGRDDRAEGRDHATDGRALA
QVYVRHHRQVLEDEGHLRRVQQLLARFLLHRDALGPELDRLAAGHFEDIHVFHRAFLVLRAVLSTARLSFVI
RPASA*
AnnotationID:6709GeneID:6708
AnnotatorUID: danlee
Modification Date/Time: 2005-07-29 12:12:54
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:4
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16467
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30504
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49710How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4670446Stop: 4668701
Length: 1746
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGATGGCGGCTGCCAGGTACGGAGTGAAAGGCGTTGCCCAGCCAGAGCAGTTCCTCGCGCACGCCAGGCTC
TTCCCGATACACCAGCGGCGAGCCGAGCCACTCCAGCAGGGCCGGGTTGGATTTGCGCATCAGGCGCAACGC
CTTGCGCAGCTCCCAGCCGCTGATGTCCAGCTCGTCGCTCAGCGGGCGTTCTATCACGTCGCGAGGTTCCTC
GACGCGCTGATACCACTCGGGCTGATGCACATAGACGAAGCGTACGTCATAGTCGCTGTCCGGCGAAGCGAA
GCCCCAGGCCCGGCTGCCCGACTCGCAGGCGTAGAGCACGACTACGTCGTGCTCGCGTTCGATCCGTTCCAG
CTCATCCAGTACCCGCTCGCGCATGGCGGCGGGGAGCGGATGGCGTTCTTCCCTGTTCATTTCGATTCTTCC
CCAGCGGGCGCCACAGGGCGCCCGTCATCCTTTCACGCACACCACCTGACGCAGGGTGTGCAGCACTTCCAC
CAGCTCGCGCTGGGCTTCCATGACCCGGTCGATGTCCTTGTAGGCCATCGGGATCTCGTCGATCACGTCGGC
GTCCTTGCGGCATTCGACGTGGGCGGTGGCGCGGGCCTGGTCGGCGACGCTGAAGACCTTCTTCGCCTTGGT
CCGGCTCATGGTCCGCCCGGCGCCGTGGCTGCACGAGCAGAACGCTTCCTGGTTGCCGAGGCCGCGGACAAT
GAAGCTCTTCGCCCCCATCGAGCCGGGAATGATGCCGAGCTGGCCCTTCTGCGCGGACACCGCGCCTTTGCG
GGTGACCAGTACCTCCTGGCCGAAGTGGCGCTCCTTCTGCACGTAGTTATGGTGGCAATCGACCGCCTCCAG
GTTGGCTTCGAACGGCTTGCGGATCACCTGGCGCGCCGCCTCGATCACCGCGTGCATCATCAGCGCGCGGTT
CTGCCGGGCGAAATCCTGGGCCCAGCCGACCGCTTCCACATAGTCGTCGAAGTGCCGGCTGCCTTCCTCGAA
GTAGGCCAGGTCCTTGTCCGGCAGGTTGGCGATGTGCTGGCGCATGTCCGCCTTGGCCAGTTCGATGAACAG
GTTGCCGATGGCGTTGCCGACCCCGCGCGAACCGCTGTGCAGCATGAACCAGACGCGGTCGGCCTCGTCCAG
GCAGACCTCGATGAAGTGGTTGCCGGTGCCGAGGGTTCCCAGGTGCTGGCGGTTGTTGGTCTTCTCCAGCCT
CGGGTGCTTGTCGGTGATCGCCTTGAAGCGATCGGCGAGCGCCTTCCAGGCCTGGTCGGCGGCCTCCGGTAC
CTCGTGCCAGGCGCCGCGGTCGCGGCGGCCGAAGGTCTTGCCGTGGGGTACCGCCTGCTCGATGGCGCTGCG
CAGGCCGTGCAGGTTGTCCGGCAGGTCGGCGGCGACCAGCGAGGTGCGCGCGGCGATCATTCCGCAGCCGAT
ATCCACGCCCACCGCGGCCGGGATGATCGCGCCGAGGGTAGGGATCACGCTACCGATGGTCGAGCCCTTGCC
CAGGTGTACGTCAGGCATCACCGCCAGGTGCTTGAAGATGAAGGGCATCTTCGCCGTGTTCAGCAACTGCTG
GCGCGCTTCCTCCTCCACCGGGACGCCCTGGGTCCAGAGCTTGATCGGCTTGCCGCCGGCCACTTCGAGGAT
ATTCATGTCTTTCATCGTGCTTTCCTTGTGCTCCGCGCCGTCTTGTCGACGGCGCGGCTATCGTTCGTGATC
AGGCCTGCTTCAGCGTGA