ViewGene

Locus Name:
GeneID:
Location:

GeneID:6707
TrivialName: PA14_60610
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_60610
PAO1 Ortholog Locus:
Sequence Length:1551
Protein Length:516
Start: 5401805
Stop: 5403355
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCAGGCGGTCGAACAGATCCAGGGCCTCCACCCGCTGCCCCAGCAGATCAGCCAGTGGCTCCCGGCCCGC
ATCGAGCCCCCAGGCCTGGCGCAGGCGAAGGATCTCCTCCTCGACCAGCGCCTCGTCGATCCGCCCGCTGTC
GGCCAGGGTCGCCATCCGTGTGATGGAAGCCGACAGCTCGCGGAAGTTGCCGGCCCAGCGCGCTTCGCTGGA
ACCGGCGAAGGCCAGGTAGCGACGCTTGGCCTCCAGGTTGAAACGCACCTGCCGCCCTTGCTCGCGGGCGTG
CCGCTCCAGTTCGAAGTCGATGTTCGGCTCGATGTCCTCGCGGCGTCCAGCCAGGCCCGGCAGCTCGAAGGT
CCACAGGTTGATGCGGGCGAACAGGTCCTCGCGGAACAGGCCTTCGGCCACTCGTCCGCGCAAGTCGCGGTG
GGTCCCGGCGATAAGCTGGAAGTCGCTCTCCACCTCACGGTCCGAACCCAGCGGGAAGAAGCGCTTCTCTTC
GATCGCCTTGAGCAGCATCGCCTGTTCGTCGGCACCCAGCTCGCCGATCTCGTCGAGGAACAGCATGCCACC
GTCGGCTGCGCGCAGCAGGCCTTCGCGCGCATTCTGCGCGCCGGTGAAGGCGCCCTTGACGTGGCCGAACAG
TGCCGACATCGCGCCGTCGCCGCGCAAGGTGGCGCAGTTGACCTCGACGAAACGCCCGTCGAGCTGGTGCCG
GCTGCGCTTGAGTTCATAGATGCGCCGGGCGAGGAACGATTTGCCGGCACCGGTCGGCCCCACCAGCAGCAT
GGGTGCCCGCGAACGCACGGCGACCCGCTCGATCTGCTCGATGGAGCGGTTGAAAGCGGCATTGCGCGTGGC
GATTCCCGACTTGAGAAAAGCCAGGCTTTCCTCCTGTTCGCGGCGGAACCGCGAGGCGATGCGGTCGTAGCG
GGACAGGTCGAGGTCGATCAGCGTCGCCGAGCCCTCGGGATGGCGCGCCTCGTCCTTGCGCCGCGACGGCGA
GGTCTGCACCAGCCGGGCCGGCAGGTAGCGCGCCTCGGTAAGGAGGAACCAGCAGATCTGCGCGACATGGGT
CCCGGTGGTGATATGCACCAGGTAGTCCTCGCGCTCGGTGTCGAAGGGGTAGGCGCTGACGAAATCGTGCAG
GGCGCCATAGACCTCCTCGAAGTCCCAGGGGTTGCGCAGTTCCATCTGCTGCAGGCGGACCTCGGTATGCGG
CGACACCGCGGCGATGTCGGCGCGAATCCGCTCGGCCAGGCCGAGGTCGCGGGCGTCGTTGCCGTGGATCAG
TTCGAGGCGGTCGATCAGCAGGTCCGGCTGCTGGCACAGGCCGATGCTCGGCCGCCACTTTTGCCAGCGCGC
CGCGCCCTTGCCGAGACGGTCGAGGGTGGCGCCGATGAAGCCGATGGCGACCGTGCGTTTCATCACTGCTTA
TCCTTCAAGATAAAGATCGATATGAAAATATATAGAAATAGTCGGGCATCTCTCCATCGAATTCGCCGACGA
ATCGCAATAAAAAATTTATTCACCTTTAAAATCAAATAG
Translation:
MQAVEQIQGLHPLPQQISQWLPARIEPPGLAQAKDLLLDQRLVDPPAVGQGRHPCDGSRQLAEVAGPARFAG
TGEGQVATLGLQVETHLPPLLAGVPLQFEVDVRLDVLAASSQARQLEGPQVDAGEQVLAEQAFGHSSAQVAV
GPGDKLEVALHLTVRTQREEALLFDRLEQHRLFVGTQLADLVEEQHATVGCAQQAFARILRAGEGALDVAEQ
CRHRAVAAQGGAVDLDETPVELVPAALEFIDAPGEERFAGTGRPHQQHGCPRTHGDPLDLLDGAVESGIARG
DSRLEKSQAFLLFAAEPRGDAVVAGQVEVDQRRRALGMARLVLAPRRRGLHQPGRQVARLGKEEPADLRDMG
PGGDMHQVVLALGVEGVGADEIVQGAIDLLEVPGVAQFHLLQADLGMRRHRGDVGANPLGQAEVAGVVAVDQ
FEAVDQQVRLLAQADARPPLLPARRALAETVEGGADEADGDRAFHHCLSFKIKIDMKIYRNSRASLHRIRRR
IAIKNLFTFKIK*
AnnotationID:6708GeneID:6707
AnnotatorUID: diggins
Modification Date/Time: 2005-05-05 10:10:13
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16466
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30502
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49709How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4665485Stop: 4667035
Length: 1551
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCAGGCGGTCGAACAGATCCAGGGCCTCCACCCGCTGCCCCAGCAGATCAGCCAGTGGCTCCCGGCCCGC
ATCGAGCCCCCAGGCCTGGCGCAGGCGAAGGATCTCCTCCTCGACCAGCGCCTCGTCGATCCGCCCGCTGTC
GGCCAGGGTCGCCATCCGTGTGATGGAAGCCGACAGCTCGCGGAAGTTGCCGGCCCAGCGCGCTTCGCTGGA
ACCGGCGAAGGCCAGGTAGCGACGCTTGGCCTCCAGGTTGAAACGCACCTGCCGCCCTTGCTCGCGGGCGTG
CCGCTCCAGTTCGAAGTCGATGTTCGGCTCGATGTCCTCGCGGCGTCCAGCCAGGCCCGGCAGCTCGAAGGT
CCACAGGTTGATGCGGGCGAACAGGTCCTCGCGGAACAGGCCTTCGGCCACTCGTCCGCGCAAGTCGCGGTG
GGTCCCGGCGATAAGCTGGAAGTCGCTCTCCACCTCACGGTCCGAACCCAGCGGGAAGAAGCGCTTCTCTTC
GATCGCCTTGAGCAGCATCGCCTGTTCGTCGGCACCCAGCTCGCCGATCTCGTCGAGGAACAGCATGCCACC
GTCGGCTGCGCGCAGCAGGCCTTCGCGCGCATTCTGCGCGCCGGTGAAGGCGCCCTTGACGTGGCCGAACAG
TGCCGACATCGCGCCGTCGCCGCGCAAGGTGGCGCAGTTGACCTCGACGAAACGCCCGTCGAGCTGGTGCCG
GCTGCGCTTGAGTTCATAGATGCGCCGGGCGAGGAACGATTTGCCGGCACCGGTCGGCCCCACCAGCAGCAT
GGGTGCCCGCGAACGCACGGCGACCCGCTCGATCTGCTCGATGGAGCGGTTGAAAGCGGCATTGCGCGTGGC
GATTCCCGACTTGAGAAAAGCCAGGCTTTCCTCCTGTTCGCGGCGGAACCGCGAGGCGATGCGGTCGTAGCG
GGACAGGTCGAGGTCGATCAGCGTCGCCGAGCCCTCGGGATGGCGCGCCTCGTCCTTGCGCCGCGACGGCGA
GGTCTGCACCAGCCGGGCCGGCAGGTAGCGCGCCTCGGTAAGGAGGAACCAGCAGATCTGCGCGACATGGGT
CCCGGTGGTGATATGCACCAGGTAGTCCTCGCGCTCGGTGTCGAAGGGGTAGGCGCTGACGAAATCGTGCAG
GGCGCCATAGACCTCCTCGAAGTCCCAGGGGTTGCGCAGTTCCATCTGCTGCAGGCGGACCTCGGTATGCGG
CGACACCGCGGCGATGTCGGCGCGAATCCGCTCGGCCAGGCCGAGGTCGCGGGCGTCGTTGCCGTGGATCAG
TTCGAGGCGGTCGATCAGCAGGTCCGGCTGCTGGCACAGGCCGATGCTCGGCCGCCACTTTTGCCAGCGCGC
CGCGCCCTTGCCGAGACGGTCGAGGGTGGCGCCGATGAAGCCGATGGCGACCGTGCGTTTCATCACTGCTTA
TCCTTCAAGATAAAGATCGATATGAAAATATATAGAAATAGTCGGGCATCTCTCCATCGAATTCGCCGACGA
ATCGCAATAAAAAATTTATTCACCTTTAAAATCAAATAG