ViewGene

Locus Name:
GeneID:
Location:

GeneID:6704
TrivialName: PA14_60430
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_60430
PAO1 Ortholog Locus:
Sequence Length:1557
Protein Length:518
Start: 5386717
Stop: 5388272
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: TRUE
Missense Discrepancy:TRUE
Comments:
Sequence:
TTGCGGTCGGAGAGGTCGTCATGGGTCAGCAACACCTGGGCGGTCTGCAGGCCATGCAGGGCGAAGCTGGAC
TCCCAGGCCTGCACCAACCCCATCTGTCCCACCGAGGCGGCGGCCTGGAGTTCGTGCATCGCGCTAGGTCGG
GACACCCAGCCCAGGCGGCTCATACCGGCGGCGACGGCGCCGGACGACACCAGCACCAGCTCGATGCCGGCG
CAATGCAGCGCCACCATCTGCTCGACCCAAACGGCCATGGCATTGCGATCCAGCCCACGGCCATCGGCCGTC
AGCAGGGCGCTACCGATCTTCACCACCCAGCGCCGCGCGCCAGTCACCTTGTCCCGCATACCCTCAACCTTA
GAAGCCCAGGCTTCGACTCTTCAGCCCCGCCGGCCCGCCCGGCGGGGTATCACGCCATCAGGGAACGTAGAA
GATCTCCGGACCGTCGCCGTCGTCTTCCTCATCATCGAAATCATCGTCATCCACCGCACCAGCGTTCTTCAG
CCCCGAACGCCGCAGCGCGCGCGCATCGTCCAGGGCCTGCAGACGGGCCCGCGCCTCGTCCTCGATACGCCG
GTCGAGTTCGGCCAGCTCCTCGGCATACTGCGGATCTTCTTCCAGGCGCAGGGTACGCTCGTCGAGATAGCG
CATGATGTCCTGGCTGAGCGCCTCGGTGCCATCGCGCTCCAGGGCGGAGATCACATAGACCGGGCCTTCCCA
GCCCAACCGCTCGATCACCGCCTGCTTGCGCGCCTCGCGCTCGGCCGGATCGAGGATCTGGTCCATCTTGTT
CAGCACCAGCCAGCGCTCGCGCTCGGTCAGCGCCGGACTGAAGCGACCCAGCTCGCGAACGATGACCTCGGC
GGCATCGGCCGGATCGCTTTCGTCCAGCGGCGCCATGTCCACCAGATGCAGGAGGATACGGGTCCGCGCCAG
ATGCTTGAGGAAGCGGATGCCCAGCCCGGCGCCTTCGGCGGCACCTTCGATCAGGCCGGGAATGTCGGCGAC
CACGAAGCTCTTGTAGCGACCGACGCTGACCACGCCGAGGTTCGGCACCAGTGTGGTGAACGGATAGTCGGC
CACCTTCGGCTTGGCCGCGGACACTGCGCGGATGAAAGTGCTCTTGCCGGCATTCGGCAGTCCCAGCAGGCC
GACGTCGGCCAGCACCTTCAGTTCCAGCTTGAGGTCGCGCGCCTCGCCCGGCTTGCCCGGGGTGGTCTGGCG
CGGCGCCCGATTGGTACTGGATTTGAAACGGGTGTTACCGAGGCCATGCCAGCCGCCCTGCGCGACCATCAG
CCGCTGACCGGGCTCGGTCAGGTCGCCGATGATCTCCTGGGTATTGGCGTCGATCACGGTAGTACCGACCGG
CACCGGCAGGATCAGGTCGTcgcCCTTGgccCcggtGCAGTCCTTGCTGCCGCCGTTCTCGCCGCGCTGGGC
ATCGAAACGGCGGGTGTAGCGATAGTCGACCAGGGTGTTCAGGTTGACGTCGGCTTCCAGGTAGATGGAACC
GCCATCGCCACCGTCGCCGCCGTtggggacCGccCTTTTCGATGA
Translation:
MRSERSSWVSNTWAVCRPCRAKLDSQACTNPICPTEAAAWSSCIALGRDTQPRRLIPAATAPDDTSTSSMPA
QCSATICSTQTAMALRSSPRPSAVSRALPIFTTQRRAPVTLSRIPSTLEAQASTLQPRRPARRGITPSGNVE
DLRTVAVVFLIIEIIVIHRTSVLQPRTPQRARIVQGLQTGPRLVLDTPVEFGQLLGILRIFFQAQGTLVEIA
HDVLAERLGAIALQGGDHIDRAFPAQPLDHRLLARLALGRIEDLVHLVQHQPALALGQRRTEATQLANDDLG
GIGRIAFVQRRHVHQMQEDTGPRQMLEEADAQPGAFGGTFDQAGNVGDHEALVATDADHAEVRHQCGERIVG
HLRLGRGHCADESALAGIRQSQQADVGQHLQFQLEVARLARLARGGLARRPIGTGFETGVTEAMPAALRDHQ
PLTGLGQVADDLLGIGVDHGSTDRHRQDQVVALGPGAVLAAAVLAALGIETAGVAIVDQGVQVDVGFQVDGT
AIATVAAVGDRPFR*
AnnotationID:6705GeneID:6704
AnnotatorUID: diggins
Modification Date/Time: 2005-05-05 07:07:45
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16463
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30496
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49706How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4650396Stop: 4651952
Length: 1557
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGGTCGGAGAGGTCGTCATGGGTCAGCAACACCTGGGCGGTCTGCAGGCCATGCAGGGCGAAGCTGGAC
TCCCAGGCCTGCACCAACCCCATCTGTCCCACCGAGGCGGCGGCCTGGAGTTCGTGCATCGCGCTAGGTCGG
GACACCCAGCCCAGGCGGCTCATACCGGCGGCGACGGCGCCGGACGACACCAGCACCAGCTCGATGCCGGCG
CAATGCAGCGCCACCATCTGCTCGACCCAAACGGCCATGGCATTGCGATCCAGCCCACGGCCATCGGCCGTC
AGCAGGGCGCTACCGATCTTCACCACCCAGCGCCGCGCGCCAGTCACCTTGTCCCGCATACCCTCAACCTTA
GAAGCCCAGGCTTCGACTCTTCAGCCCCGCCGGCCCGCCCGGCGGGGTATCACGCCATCAGGGAACGTAGAA
GATCTCCGGACCGTCGCCGTCGTCTTCCTCATCATCGAAATCATCGTCATCCACCGCACCAGCGTTCTTCAG
CCCCGAACGCCGCAGCGCGCGCGCATCGTCCAGGGCCTGCAGACGGGCCCGCGCCTCGTCCTCGATACGCCG
GTCGAGTTCGGCCAGCTCCTCGGCATACTGCGGATCTTCTTCCAGGCGCAGGGTACGCTCGTCGAGATAGCG
CATGATGTCCTGGCTGAGCGCCTCGGTGCCATCGCGCTCCAGGGCGGAGATCACATAGACCGGGCCTTCCCA
GCCCAACCGCTCGATCACCGCCTGCTTGCGCGCCTCGCGCTCGGCCGGATCGAGGATCTGGTCCATCTTGTT
CAGCACCAGCCAGCGCTCGCGCTCGGTCAGCGCCGGACTGAAGCGACCCAGCTCGCGAACGATGACCTCGGC
GGCATCGGCCGGATCGCTTTCGTCCAGCGGCGCCATGTCCACCAGATGCAGGAGGATACGGGTCCGCGCCAG
ATGCTTGAGGAAGCGGATGCCCAGCCCGGCGCCTTCGGCGGCACCTTCGATCAGGCCGGGAATGTCGGCGAC
CACGAAGCTCTTGTAGCGACCGACGCTGACCACGCCGAGGTTCGGCACCAGTGTGGTGAACGGATAGTCGGC
CACCTTCGGCTTGGCCGCGGACACTGCGCGGATGAAAGTGCTCTTGCCGGCATTCGGCAGTCCCAGCAGGCC
GACGTCGGCCAGCACCTTCAGTTCCAGCTTGAGGTCGCGCGCCTCGCCCGGCTTGCCCGGGGTGGTCTGGCG
CGGCGCCCGATTGGTACTGGATTTGAAACGGGTGTTACCGAGGCCATGCCAGCCGCCCTGCGCGACCATCAG
CCGCTGACCGGGCTCGGTCAGGTCGCCGATGATCTCCTGGGTATTGGCGTCGATCACGGTAGTACCGACCGG
CACCGGCAGGATCAGGTCGTcgcCCTTGgccCcggtGCAGTCCTTGCTGCCGCCGTTCTCGCCGCGCTGGGC
ATCGAAACGGCGGGTGTAGCGATAGTCGACCAGGGTGTTCAGGTTGACGTCGGCTTCCAGGTAGATGGAACC
GCCATCGCCACCGTCGCCGCCGTtggggacCGccCTTTTCGATGA