ViewGene
Locus Name:
GeneID:
Location:

GeneID:6703
TrivialName: PA14_60340
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_60340
PAO1 Ortholog Locus:
Sequence Length:516
Protein Length:171
Start: 5378435
Stop: 5378950
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCTACCGCCCTCCCCGCTTGGGAAGGGCGCAGCGACCGACGGTTCAGGCCGGCTGGACGTCGATGATCTC
GACTTCGAAGGCCAGGGTCTTGCCGGCCAGCGGATGATTGAAGTCGACGGTCACCTGCTGCTCATCGAACGC
CTTGACCACGCCCGGCAGTTCGGTCTTGGCCGCGTCGTTGAAGATCACCAGCAGGCCCTCGGCCAGCTCCAT
GTCCTGGAACTGGTCGCGCGGCATGATCTGCACGTTCTGCGGATTCGGCTGGCCGAAGCCCTGTTCGGGAAG
AATGCTCAGGGTGCGCTTGTCGCCAGCCTTCAAGCCGAACAGCGCCTGTTCGAAGCCCGGCAGCAGGTTGCC
GTCGCCGACCTTGAACGAGGCCGGCTGCTTGTCGAAGGTGCTGTCGACGACGTTGCCGTCCTCCAGCTTGAG
GGCGAAATGCAGGGTGACGCGGCTCTCCTGGCCAATGCGGGTCGACTCAGCCATGGGCGGCTTCTCCGGATT
TCTTCGATCTGA
Translation:
MLPPSPLGKGAATDGSGRLDVDDLDFEGQGLAGQRMIEVDGHLLLIERLDHARQFGLGRVVEDHQQALGQLH
VLELVARHDLHVLRIRLAEALFGKNAQGALVASLQAEQRLFEARQQVAVADLERGRLLVEGAVDDVAVLQLE
GEMQGDAALLANAGRLSHGRLLRISSI*
AnnotationID:6704GeneID:6703
AnnotatorUID: diggins
Modification Date/Time: 2005-05-05 06:06:14
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:4
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16462




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30494




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49705How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4642114Stop: 4642629

          
Length: 516


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCTACCGCCCTCCCCGCTTGGGAAGGGCGCAGCGACCGACGGTTCAGGCCGGCTGGACGTCGATGATCTC 
GACTTCGAAGGCCAGGGTCTTGCCGGCCAGCGGATGATTGAAGTCGACGGTCACCTGCTGCTCATCGAACGC 
CTTGACCACGCCCGGCAGTTCGGTCTTGGCCGCGTCGTTGAAGATCACCAGCAGGCCCTCGGCCAGCTCCAT 
GTCCTGGAACTGGTCGCGCGGCATGATCTGCACGTTCTGCGGATTCGGCTGGCCGAAGCCCTGTTCGGGAAG 
AATGCTCAGGGTGCGCTTGTCGCCAGCCTTCAAGCCGAACAGCGCCTGTTCGAAGCCCGGCAGCAGGTTGCC 
GTCGCCGACCTTGAACGAGGCCGGCTGCTTGTCGAAGGTGCTGTCGACGACGTTGCCGTCCTCCAGCTTGAG 
GGCGAAATGCAGGGTGACGCGGCTCTCCTGGCCAATGCGGGTCGACTCAGCCATGGGCGGCTTCTCCGGATT 
TCTTCGATCTGA