ViewGene
Locus Name:
GeneID:
Location:

GeneID:6697
TrivialName: PA14_59810
AnnotatorUID: danlee
Modification Date/Time:2006-04-14 15:03:26
LocusName:PA14_59810
PAO1 Ortholog Locus:
Sequence Length:246
Protein Length:81
Start: 5326776
Stop: 5327021
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Inactivated 4-14-06.
Sequence:
GTGATAGATCAGATCCCAGCTCGAAGACCCCACGTGCTGGAAAAGCACCATATGCTGCGGCAGTGGGCCAGC
ACCGATGAAACCGAAGCCGTCTCCACGCAAAAGCGTCCGCGACGCACCGCTCCCCAGCGCCTCTGCGTCCGT
AGCGAGTACGACCTGCCCATGCTGATCCAGCAGCATGTAGTTTCCGGCATCATTCCGGCGCAACATCGAATC
GAGGTCTTCGCCGAGAATCTCCAGGCCTAG
Translation:
MIDQIPARRPHVLEKHHMLRQWASTDETEAVSTQKRPRRTAPQRLCVRSEYDLPMLIQQHVVSGIIPAQHRI
EVFAENLQA*
AnnotationID:6698GeneID:6697
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 09:09:24
Gene Name:
Confidence Code:4
GeneProduct:Hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:
No significant similarity






 
Structural Features:






   
Genomic Context:






   
Comment:
This ORF is overlapped with pvrS (GeneID 6697)


















    ReferenceID:16457




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30482




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49699How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4590455Stop: 4590700

          
Length: 246


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGATAGATCAGATCCCAGCTCGAAGACCCCACGTGCTGGAAAAGCACCATATGCTGCGGCAGTGGGCCAGC 
ACCGATGAAACCGAAGCCGTCTCCACGCAAAAGCGTCCGCGACGCACCGCTCCCCAGCGCCTCTGCGTCCGT 
AGCGAGTACGACCTGCCCATGCTGATCCAGCAGCATGTAGTTTCCGGCATCATTCCGGCGCAACATCGAATC 
GAGGTCTTCGCCGAGAATCTCCAGGCCTAG