ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6690

TrivialName: PA14_59300

AnnotatorUID: danlee

Modification Date/Time: 2006-04-14 13:01:05

LocusName: PA14_59300

PAO1 Ortholog Locus:

Sequence Length: 1275

Protein Length: 424

Start: 5284970

Stop: 5283696

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK23765.1| (AE005853) hypothetical protein [Caulobacter crescentus CB15] Identities = 77/301 (25%), Positives = 102/301 (33%), Gaps = 43/301 (14%)

Sequence:

TTGTTCCTCGTTGGCGTTGGACGAACTGAACATTCCAGCCGCTGCGGCCAGGCCCAGGCCGACCCCGATGGC
GATGATGATCAGCACGATGATCATCTCGATGGAAACGAAACCGCCCTGCGTCGGACGGGAAGTGCGTTGCGT
AGTGCTCATGGAGCGCTCCTTGGTGAGGTTTCAGTGGTTCATGGATTGGATGAGCTGCTGTGCCTGGTAGGC
GCCGAGCAGGACCAGGATCATCAGCGCGCCGATGAAGATCAGGGCGAAGTTCTTCACCAGCCCGGCGGCCAG
CTCGATCTGCTTGAGGCTGGTCTCCTGCCAGCGGCGGCTGAACTTGACCAGCGCCTCGGAGAAGCCTCCCCG
GTTGGCGAGGATGCACAGGTACTGGATGGCCTGCCGGTCGGGGAAATCGTGACCGGCGCTGCGAAGGGCAAC
ACCCAAGTTCTGGCCCAGGCCCACGCCGTAGCGGGCAGCTTCCAAGCGCTGCTTCAGCCAGGGCGGGGAGAT
CTTGATCATGCTGGCCAGGCTGTCGTAGGGGCGTATGCCGGCGTTGAGCATGACCGCCATGTTCAGCAGGAA
GGTGGTGCCCTGGAGCATGCGGTAGATGGACCAGGGCGGCAGCGTCCGGTCCAGCCAGACCCGGCCTTTCCA
GCGGTAGGTCGGCAACGTGACGATGACCACCACCGTGAGGGTGATGACGGCGACCAGAACGTAGATACCAGG
TCCTGTGACGAAGCTGGCAATGGCGTTGAGCGTGGCGAGCGGGCCGGTCCAGGTGACTGGGTCGGAGAGCCT
GGCCAGGCTGGGGACCATGCGATAGGCCACGATGCACAGCAGGAACACCATCATGGCGGACAGCGCCGAGGG
GTAGAGCAGCGCCTGCCAGATGGTGGCGCGGATCCTGGCCTGGGCCTCGACCAGGGAGACGGCATCGCCCAT
GGCCTGAACCAGGTTGCCGCTCATCTCGCCGGCCTCGATCAACGCTCGCTCCTGGGCGGGGAGATAGAGCGC
CATGGCGGTGGCCAGACGCTTGCCGTTGGACAGCCCCATCAGCGCTTCGCGACTGGCGATGGCCACCGGATG
AAACGGATGCTGCCCCTCATGAGCGAAGATCTTGTGCACCTCTGCCACAGCATCCTTCAACGGGACCCCGTT
TTCGAGCAGGGTGGACATGCTTTCGTAGAACTGCAGGCGTTCCTTGCGGCCGAACTGCTTGCTGTAGAAGGC
GAACTGCAACTGCTCCCAGAAGCCCCCCATCAGCACGCCTCCTGCGAGTAG

Translation:

MFLVGVGRTEHSSRCGQAQADPDGDDDQHDDHLDGNETALRRTGSALRSAHGALLGEVSVVHGLDELLCLVG
AEQDQDHQRADEDQGEVLHQPGGQLDLLEAGLLPAAAELDQRLGEASPVGEDAQVLDGLPVGEIVTGAAKGN
TQVLAQAHAVAGSFQALLQPGRGDLDHAGQAVVGAYAGVEHDRHVQQEGGALEHAVDGPGRQRPVQPDPAFP
AVGRQRDDDHHREGDDGDQNVDTRSCDEAGNGVERGERAGPGDWVGEPGQAGDHAIGHDAQQEHHHGGQRRG
VEQRLPDGGADPGLGLDQGDGIAHGLNQVAAHLAGLDQRSLLGGEIERHGGGQTLAVGQPHQRFATGDGHRM
KRMLPLMSEDLVHLCHSILQRDPVFEQGGHAFVELQAFLAAELLAVEGELQLLPEAPHQHASCE*

AnnotationID:6691 GeneID:6690

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 15:03:57

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

No significant similarity

Structural Features:

Genomic Context:

Comment:

This ORF is overlapped with the ORF (pilR2)

ReferenceID:16454

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30469