ViewGene
Locus Name:
GeneID:
Location:

GeneID:6681
TrivialName: PA14_58590
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 19:07:28
LocusName:PA14_58590
PAO1 Ortholog Locus:
Sequence Length:837
Protein Length:278
Start: 5221281
Stop: 5220445
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCCGTGACGTTCGAGCGCCTGTTCCAGGGCCTCTCGATCGGTGTCGTCGCCCAACTGCGCCGCGCGTCG
GTAGTAGGCCAGCGCCAGGCTGCGGAACGGTGGGTGGGCCGACTGCTCCAGGCCATGGCGGGCGCTGCGCAG
GAAGTTCAGGTTGCCGCCTTCGAGGGCACGCCGGAGCCAGGTTTCGGCTTCGGCATGGCGGCCCGAGGCGCT
GAGCATCGCGGCGTGGCTGAACTGGCCGCGAAAATCACCACCCTCGGCGGAGCGTCGATACCAGTGCGCAGC
TTGCGCCAGGTCGCGAGCGACCACCAGGCCTTCTTCGTGGTAGCGCCCCACCAGGTTCATCGCTTTCGCGTG
GCCCTGCTCGGCCGCTTGCCGATACAGCGCATAGGCGCGCGGCTGGTCCTGGGGCACCCCGCGGCCGGTAGC
GTGAAGATTGGCCAGGTTGTAGCGGGCCCAGTCGAGGCCGGCCTGGGCGGCGATCCGATAGTGGACCGCTGC
CGCGGCTGGATCCGCCGGGCCGCCCCAGCCATGTTCCAGGCAGCGAGCGAGCATATTGCGCGCCATTGCGTG
GCCGTGCCCGGCGGCGATCGCGAACCAGGTCCGCGCCAGGGGCGGGTCGCGCTGGATGCCTTGGCCGTCCAG
AAGGATCTGTCCGAGCAGGGCCTGGGCTTCCGTCAGGCCCTCGCGCGCAGCGCCGAGGATGGCCTGGGCAAC
CTCGCCCGGGGTACCGGCCAGTTGTGCGGCGAAACCTTCGGCGTCCAGTGCGTCGTGACGGAGCAGCAGGTG
GCGCATGTTCAGAGTTCCGACCAGCGCCGCAGGAGATTGTGGTAG
Translation:
MPVTFERLFQGLSIGVVAQLRRASVVGQRQAAERWVGRLLQAMAGAAQEVQVAAFEGTPEPGFGFGMAARGA
EHRGVAELAAKITTLGGASIPVRSLRQVASDHQAFFVVAPHQVHRFRVALLGRLPIQRIGARLVLGHPAAGS
VKIGQVVAGPVEAGLGGDPIVDRCRGWIRRAAPAMFQAASEHIARHCVAVPGGDREPGPRQGRVALDALAVQ
KDLSEQGLGFRQALARSAEDGLGNLARGTGQLCGETFGVQCVVTEQQVAHVQSSDQRRRRLW*
AnnotationID:6682GeneID:6681
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 19:07:43
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16449




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30453




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49683How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4484960Stop: 4484124

          
Length: 837


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCCCGTGACGTTCGAGCGCCTGTTCCAGGGCCTCTCGATCGGTGTCGTCGCCCAACTGCGCCGCGCGTCG 
GTAGTAGGCCAGCGCCAGGCTGCGGAACGGTGGGTGGGCCGACTGCTCCAGGCCATGGCGGGCGCTGCGCAG 
GAAGTTCAGGTTGCCGCCTTCGAGGGCACGCCGGAGCCAGGTTTCGGCTTCGGCATGGCGGCCCGAGGCGCT 
GAGCATCGCGGCGTGGCTGAACTGGCCGCGAAAATCACCACCCTCGGCGGAGCGTCGATACCAGTGCGCAGC 
TTGCGCCAGGTCGCGAGCGACCACCAGGCCTTCTTCGTGGTAGCGCCCCACCAGGTTCATCGCTTTCGCGTG 
GCCCTGCTCGGCCGCTTGCCGATACAGCGCATAGGCGCGCGGCTGGTCCTGGGGCACCCCGCGGCCGGTAGC 
GTGAAGATTGGCCAGGTTGTAGCGGGCCCAGTCGAGGCCGGCCTGGGCGGCGATCCGATAGTGGACCGCTGC 
CGCGGCTGGATCCGCCGGGCCGCCCCAGCCATGTTCCAGGCAGCGAGCGAGCATATTGCGCGCCATTGCGTG 
GCCGTGCCCGGCGGCGATCGCGAACCAGGTCCGCGCCAGGGGCGGGTCGCGCTGGATGCCTTGGCCGTCCAG 
AAGGATCTGTCCGAGCAGGGCCTGGGCTTCCGTCAGGCCCTCGCGCGCAGCGCCGAGGATGGCCTGGGCAAC 
CTCGCCCGGGGTACCGGCCAGTTGTGCGGCGAAACCTTCGGCGTCCAGTGCGTCGTGACGGAGCAGCAGGTG 
GCGCATGTTCAGAGTTCCGACCAGCGCCGCAGGAGATTGTGGTAG