ViewGene

Locus Name:
GeneID:
Location:

GeneID:6675
TrivialName: PA14_58340
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_58340
PAO1 Ortholog Locus:
Sequence Length:1692
Protein Length:563
Start: 5196712
Stop: 5195021
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 143/551 (25%), Positives = 208/551 (37%), Gaps = 73/551 (13%)
Sequence:
GTGGCGGGGCGGCGCGGCTGGCAGGCGAAGCTACTTGCCGACGCTGACCTCGTAGAACGAGTTCAGGCCGAA
GGGACTGATCCTGAAGTCGTGTACCGTCTTGCGCATCGGCTGGTACACGGTGGAGTGGGCGATCGGGGTGAT
CGGCACCTGTTCCTTGAGGATGTGCTGGGCCTGCTTGTACAGCTCGGTGCGCTTGCCCTGGTCGGTGGTGCG
CTTGGCATCCTTGACCAGCTTGTCGTAGCCGGCGTCGCACCATTTGGAGAAGTTGTTGCCGTCCACCGCGTC
GCAGCCGTAGAGGGTGCCGAGCCAGTTGTCCGGGTCACCGTTGTCGCCGCTCCAGCCGATCAGCATGGCGTC
ATGCTCGCCGCCCTTGGCGCGCTTGATGTATTCGCCCCATTCATAGGTGACGATCTTCGCCTTGATACCGAT
CTTCGCCCAATCGTTCTGCAGCATTTCCGCCATCAGCTTGGCGTTGGGGTTGTAGGGGCGTTGTACCGGCAT
GGCCCACAGGGTGATCTCGGTGCCTTCGGCGACCCCGGCCTTCTTCAGCAGCTCCCTGGCCTTGGCCGGATC
GTAGGGCGCGTCCTTGATGGTCTCGTCGTAGGACCACTGGGTCGGCGGCATGCCGTTGCTCGCCAACTGGCC
GGCGCCCTGGTAGACGGCGTCGATGATGGCCTGCTTGTTCACCGCCATGTCCAGCGCCTGGCGTACTTCCAG
CTTGTCGAACGGCTTGTGGGTGACGTTGTAGGCGATGTAGCCGAGGTTGAAGCCGGCCTGCGACGGCAGGTT
CAGGTTCGGGTCCTTCTTCAGCGCGTCGAGGTCGGCGGGGCGTGGGTTGAGGGTGATCTGGCACTCGCCGGC
CTTGAGCTTCTGCGCGCGCACCGAGGCGTCGGTGTTGATGGCGAAGATCAGGTTGTCGACCTTCACCTCGTC
CGGCTTCCAGTAGTCCTTGTTGCCCTTGAAACGGATCTGCGCATCCTTCTGGTAGCGGCTGAACACGAACGG
GCCGGTACCGATCGGCTTCTGGTTGATATCGCTGGCCTTGCCCTGCTTGAGCAGTTGCGCGGCGTATTCGGC
GGACTGGATCGATGGGAAGGGCATCGCCAGGTTCTGGATGAAGGCCGCGTCGACCTCGTTGAGGGTGAATTT
CACCGTGTGCTCGTCGAGCTTCTCGATCCTGGCGATGTTCTTGTCCAGGCCCATGTCGGTGAAGTAGGGAAA
CTCGGTGGGGTAGGCCTTGCGGAACGGATGATCCTTGTCGAGCATGCGTTCGAAGGTGAACAGCACGTCGTC
GGCATTGAATTCGCGGGTCGGCTTGAAGTAGTCGGTGCTGTGGAACTTCACGCCCTTGCGCAGGTGGAAGGT
ATAGGTCTTGCCGTCGTCGCTGACGTCCCAGCTTTCCGCGAGGCCGGGAAGGACCTTGGTGCCGCCGCGCTC
GAACTGGGTCAGGCGGTTGAAGACGGTTTCCGCCGCGGCGTCGAAATCGGTACCGGTGGTGTACTGGGCGGG
ATCGAAGCCGGCCGGGCTGCCTTCCGAGCAGAAGATCAGGTTGCTGGCGAAGGCCTGGGGAACGGCGGCGAC
CAGCGCTGCGCCGAGCAGCGAGGGCATGATCGCGGAGCGGATGACGGCGTTTCTACGCATGGAGTGACCTCT
GGTTATTTTGATTGTCTGCGAGGGACAGCCTCGTGA
Translation:
MAGRRGWQAKLLADADLVERVQAEGTDPEVVYRLAHRLVHGGVGDRGDRHLFLEDVLGLLVQLGALALVGGA
LGILDQLVVAGVAPFGEVVAVHRVAAVEGAEPVVRVTVVAAPADQHGVMLAALGALDVFAPFIGDDLRLDTD
LRPIVLQHFRHQLGVGVVGALYRHGPQGDLGAFGDPGLLQQLPGLGRIVGRVLDGLVVGPLGRRHAVARQLA
GALVDGVDDGLLVHRHVQRLAYFQLVERLVGDVVGDVAEVEAGLRRQVQVRVLLQRVEVGGAWVEGDLALAG
LELLRAHRGVGVDGEDQVVDLHLVRLPVVLVALETDLRILLVAAEHERAGTDRLLVDIAGLALLEQLRGVFG
GLDRWEGHRQVLDEGRVDLVEGEFHRVLVELLDPGDVLVQAHVGEVGKLGGVGLAERMILVEHAFEGEQHVV
GIEFAGRLEVVGAVELHALAQVEGIGLAVVADVPAFREAGKDLGAAALELGQAVEDGFRRGVEIGTGGVLGG
IEAGRAAFRAEDQVAGEGLGNGGDQRCAEQRGHDRGADDGVSTHGVTSGYFDCLRGTAS*
AnnotationID:6676GeneID:6675
AnnotatorUID: diggins
Modification Date/Time: 2005-05-04 06:06:38
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16444
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30443
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49677How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4460391Stop: 4458700
Length: 1692
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCGGGGCGGCGCGGCTGGCAGGCGAAGCTACTTGCCGACGCTGACCTCGTAGAACGAGTTCAGGCCGAA
GGGACTGATCCTGAAGTCGTGTACCGTCTTGCGCATCGGCTGGTACACGGTGGAGTGGGCGATCGGGGTGAT
CGGCACCTGTTCCTTGAGGATGTGCTGGGCCTGCTTGTACAGCTCGGTGCGCTTGCCCTGGTCGGTGGTGCG
CTTGGCATCCTTGACCAGCTTGTCGTAGCCGGCGTCGCACCATTTGGAGAAGTTGTTGCCGTCCACCGCGTC
GCAGCCGTAGAGGGTGCCGAGCCAGTTGTCCGGGTCACCGTTGTCGCCGCTCCAGCCGATCAGCATGGCGTC
ATGCTCGCCGCCCTTGGCGCGCTTGATGTATTCGCCCCATTCATAGGTGACGATCTTCGCCTTGATACCGAT
CTTCGCCCAATCGTTCTGCAGCATTTCCGCCATCAGCTTGGCGTTGGGGTTGTAGGGGCGTTGTACCGGCAT
GGCCCACAGGGTGATCTCGGTGCCTTCGGCGACCCCGGCCTTCTTCAGCAGCTCCCTGGCCTTGGCCGGATC
GTAGGGCGCGTCCTTGATGGTCTCGTCGTAGGACCACTGGGTCGGCGGCATGCCGTTGCTCGCCAACTGGCC
GGCGCCCTGGTAGACGGCGTCGATGATGGCCTGCTTGTTCACCGCCATGTCCAGCGCCTGGCGTACTTCCAG
CTTGTCGAACGGCTTGTGGGTGACGTTGTAGGCGATGTAGCCGAGGTTGAAGCCGGCCTGCGACGGCAGGTT
CAGGTTCGGGTCCTTCTTCAGCGCGTCGAGGTCGGCGGGGCGTGGGTTGAGGGTGATCTGGCACTCGCCGGC
CTTGAGCTTCTGCGCGCGCACCGAGGCGTCGGTGTTGATGGCGAAGATCAGGTTGTCGACCTTCACCTCGTC
CGGCTTCCAGTAGTCCTTGTTGCCCTTGAAACGGATCTGCGCATCCTTCTGGTAGCGGCTGAACACGAACGG
GCCGGTACCGATCGGCTTCTGGTTGATATCGCTGGCCTTGCCCTGCTTGAGCAGTTGCGCGGCGTATTCGGC
GGACTGGATCGATGGGAAGGGCATCGCCAGGTTCTGGATGAAGGCCGCGTCGACCTCGTTGAGGGTGAATTT
CACCGTGTGCTCGTCGAGCTTCTCGATCCTGGCGATGTTCTTGTCCAGGCCCATGTCGGTGAAGTAGGGAAA
CTCGGTGGGGTAGGCCTTGCGGAACGGATGATCCTTGTCGAGCATGCGTTCGAAGGTGAACAGCACGTCGTC
GGCATTGAATTCGCGGGTCGGCTTGAAGTAGTCGGTGCTGTGGAACTTCACGCCCTTGCGCAGGTGGAAGGT
ATAGGTCTTGCCGTCGTCGCTGACGTCCCAGCTTTCCGCGAGGCCGGGAAGGACCTTGGTGCCGCCGCGCTC
GAACTGGGTCAGGCGGTTGAAGACGGTTTCCGCCGCGGCGTCGAAATCGGTACCGGTGGTGTACTGGGCGGG
ATCGAAGCCGGCCGGGCTGCCTTCCGAGCAGAAGATCAGGTTGCTGGCGAAGGCCTGGGGAACGGCGGCGAC
CAGCGCTGCGCCGAGCAGCGAGGGCATGATCGCGGAGCGGATGACGGCGTTTCTACGCATGGAGTGACCTCT
GGTTATTTTGATTGTCTGCGAGGGACAGCCTCGTGA