ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6673

TrivialName: PA14_58280

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_58280

PAO1 Ortholog Locus:

Sequence Length: 1785

Protein Length: 594

Start: 5189225

Stop: 5191009

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAN67638.1|AE016393_7 (AE016781) exonuclease SbcC [Pseudomonas putida KT2440] Identities = 112/445 (25%), Positives = 170/445 (38%), Gaps = 62/445 (13%)

Sequence:

TTGCCACGGTGCGTTGGCCTGGCTTCCGGCAGGCAGGCCAAGGGCGTAGCTGCCCTTGCCGGCGAGGGTTTT
CAGGCGCGGCATCAAGTAGGTGTCGGCGGCATTGCGGAAGACCGGCTCCATGTCCTGCGGCAGGCTGTCGAG
GGTTTCCCGTTGCAGCAGTTCGGAGAGCGGCTGCGGCGCCAGGTAGGCCGGTACCAGCGCATCCTTCGGCAA
CACCTCGGCGAGCGGCGGATAGCGTTTGTCGAGGGTGTCCAGGGCCTTGCCGAGCAACTGGTCGTCGAGGGA
GAACAGCAGGGTCTGGCCATGGCGCGCCATGCCGATGCGGAAGAACGCGCGGCCGCTGATGCTGTCCGGGTT
GTCCGCCTGGCTGGCCGGATAGGCGCCGAAGTTCGAGCTGACCTGGCGGGTCCAGCGGCGGGTCTGGCCATC
CACCCGGTCTTCCACCGGGAAGCTGCCACCCTCGACCTTGGCTTCCTTCGCGCCGATCACGCGACCGAACAG
CTTGCCCAGCTCGTCGTCGAGTTCGGCACTGGTCGGCGCGCTCAACTGGCCCACCAGCAGCGGCGAATGCAG
CCGCGAACTGGCGTACCAGCAGAGACCGGCAGCGCCGCTGAGATGCTCGGAGAAGGCCTGGGCCATCTTCTG
CTCGGCCCCCAGACGCTCCAGCATCACCCCGTACAGGCCAGGGGTGACCGGCAGCGCCACGCAGGCGCTGGC
GCCCATCGGCATGGCCTGCCAGACCGGGGCGAAGTCCAGCGGCGGCTGGCGTTCCACCTCGTTCAGCGCCAG
GTAGCTGCTCCAGCCCTGCTCGCCCTTCTCGAAGCGCACCCCGGCGAAGCTCGGGATGAAGCGCTGGTAGCC
CATGGCCAGGACGCTGGCATTGAGGGTAATGCGCTGGCGCAGCTCGCCGCGGCCCGGCAGGCCGAAGCGCTC
GGGGAACAGTTCGTCGCCGTCGAGCAGTGCCTCCAGGTCTTCGCTGGCCGGAGCGTTCAGCGGGCTGTCGTC
GCTTTCGCCACCATCGTCGAAGAGCATCCGTGGGTTCGACAGCAACAACAGCCGGTCGCCCTTGGACAGGAA
CAGCATCGCCTTGTCGTTGCCGTAGCGCAGGCGATAGACCGAGGTTCCCGCCAGCTCGCCGACCTTGCGCAA
CTGCTGGTCGTCGGCGGCGATATGGGCCAGCGGCTCGAGCACCCGCGCCAGGCCGCCACGCTTGAGCACCAC
CACGAAGTCGCGCAGGCGGCCGTCGGCGCCGCGCCAGAGGGCGACCTGGGCCGGTTGGTCGAGCAGTTCCTC
GACCAGGCTGTCCTTCAGGGTCAGGTCGTGCTCGTAGATGATCCGCCGCAACGTACCGGTCAGGCCAAGGCG
GTCGCCATTGTTCTCGTAATAGAAAACGAAGTCCTCGGTCAGGGTATCGCGCAGCAACGGCACCTCGAGGAT
TTCCTTCGGCAGGCGGCTCAGCGACACGCTCTCGATCAGCGCGTCGGGCTTGCGCAGGTCACGGTAGGCTCG
CGGCGCGTCGGCGTCCGCGGGAGCCTGGGCGCCGATCGGCTGGCCGAGGTCCTCTTCGGCCGGGCGCCCTCC
GCCGAGCCGCTCCAGCCAGCCCAACTGCCAGGCCAGCACACCGCCGGCGGCCAGCGCGGCGACGATCCCCAG
CACCGGCCACAGGGCGCTTCGGGGGCGCGCAGCGGCGGGCGCAGGGGTTCCGTTGGCAGGGCTGGGGGTGTT
GTTCTCGCTCATGGTTCGCTAATCCCGTGTCATCCGTACGAGGGGATGCTTCAGTAG

Translation:

MPRCVGLASGRQAKGVAALAGEGFQARHQVGVGGIAEDRLHVLRQAVEGFPLQQFGERLRRQVGRYQRILRQ
HLGERRIAFVEGVQGLAEQLVVEGEQQGLAMARHADAEERAAADAVRVVRLAGRIGAEVRADLAGPAAGLAI
HPVFHREAATLDLGFLRADHATEQLAQLVVEFGTGRRAQLAHQQRRMQPRTGVPAETGSAAEMLGEGLGHLL
LGPQTLQHHPVQARGDRQRHAGAGAHRHGLPDRGEVQRRLAFHLVQRQVAAPALLALLEAHPGEARDEALVA
HGQDAGIEGNALAQLAAARQAEALGEQFVAVEQCLQVFAGRSVQRAVVAFATIVEEHPWVRQQQQPVALGQE
QHRLVVAVAQAIDRGSRQLADLAQLLVVGGDMGQRLEHPRQAATLEHHHEVAQAAVGAAPEGDLGRLVEQFL
DQAVLQGQVVLVDDPPQRTGQAKAVAIVLVIENEVLGQGIAQQRHLEDFLRQAAQRHALDQRVGLAQVTVGS
RRVGVRGSLGADRLAEVLFGRAPSAEPLQPAQLPGQHTAGGQRGDDPQHRPQGASGARSGGRRGSVGRAGGV
VLAHGSLIPCHPYEGMLQ*

AnnotationID:6674 GeneID:6673

AnnotatorUID: danlee

Modification Date/Time: 2006-03-13 11:11:52

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16442

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30440