ViewGene
Locus Name:
GeneID:
Location:

GeneID:6666
TrivialName: PA14_57750
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 19:07:34
LocusName:PA14_57750
PAO1 Ortholog Locus:
Sequence Length:771
Protein Length:256
Start: 5142580
Stop: 5143350
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCTCGATGGCGAAGCGCTTGCCCAGGTAGTCGCCCAGCGCCTGTACCCCGTAGCGCTCGGTGGCATGGTG
TCCGGCGGCGATGAAGCTGATGCCGTTCTCCCGCGCGCTGTGCACGGTCTGCTCGGAAACCTCGCCGGTCAG
GTAGGCATCGACGCCGGCGGCGATCGCCTGGTCGATATAACCCTGGGCGCCGCCGGTGCACCAGGCGATGCG
TCGGATCGGCTGGCCGGCGTCGACCAGCAGCGGCTCGCGCCCCAGCGCATCGCGCACATGCCGAGCGAAATC
GGCAGGCTGCATCGGCTCGGCAAGCGAACCGAGGAGGACGATGGAACGCGGGTTGCCCGGCTCCAACGGCCC
TTCCACTTCGAAGCCGAGCTGCCGGGCGAGCTGCACGTTGTTACCCACCTCCGGATGCAGATCCAGCGGCAG
GTGGTAAGCGAGCAGACTGATATCGTTGTTCAGCAGGGTCTTCAGGCGCCGTTGCTTCATGCCGACCACGCA
GGGATTCTCACCCTTCCAGAAGTAGCCGTGATGCACCAGCACCACGTCGGCGTCGGCCTCCACGGCGGCATC
CAGCAGCGCCTGGCTGGCAGTGACCCCGCTGACGATCCGCCGCACCTGCGGCCGGCCCTCGACCTGCAGGCC
GTTCGGGCAGTAGTCCTGGATGCGCGCGGCATCCAGATAACGGTCGGCCTCTTCGACCAGGGTGCTCAGGGC
GATAGCCATGCAAATTCCTCTTCATTCAGGCAGGGCGCGCCGCTCCTCTAA
Translation:
MLDGEALAQVVAQRLYPVALGGMVSGGDEADAVLPRAVHGLLGNLAGQVGIDAGGDRLVDITLGAAGAPGDA
SDRLAGVDQQRLAPQRIAHMPSEIGRLHRLGKRTEEDDGTRVARLQRPFHFEAELPGELHVVTHLRMQIQRQ
VVSEQTDIVVQQGLQAPLLHADHAGILTLPEVAVMHQHHVGVGLHGGIQQRLAGSDPADDPPHLRPALDLQA
VRAVVLDARGIQITVGLFDQGAQGDSHANSSSFRQGAPLL*
AnnotationID:6667GeneID:6666
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 19:07:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16432




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30427




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49668How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4406259Stop: 4407029

          
Length: 771


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCTCGATGGCGAAGCGCTTGCCCAGGTAGTCGCCCAGCGCCTGTACCCCGTAGCGCTCGGTGGCATGGTG 
TCCGGCGGCGATGAAGCTGATGCCGTTCTCCCGCGCGCTGTGCACGGTCTGCTCGGAAACCTCGCCGGTCAG 
GTAGGCATCGACGCCGGCGGCGATCGCCTGGTCGATATAACCCTGGGCGCCGCCGGTGCACCAGGCGATGCG 
TCGGATCGGCTGGCCGGCGTCGACCAGCAGCGGCTCGCGCCCCAGCGCATCGCGCACATGCCGAGCGAAATC 
GGCAGGCTGCATCGGCTCGGCAAGCGAACCGAGGAGGACGATGGAACGCGGGTTGCCCGGCTCCAACGGCCC 
TTCCACTTCGAAGCCGAGCTGCCGGGCGAGCTGCACGTTGTTACCCACCTCCGGATGCAGATCCAGCGGCAG 
GTGGTAAGCGAGCAGACTGATATCGTTGTTCAGCAGGGTCTTCAGGCGCCGTTGCTTCATGCCGACCACGCA 
GGGATTCTCACCCTTCCAGAAGTAGCCGTGATGCACCAGCACCACGTCGGCGTCGGCCTCCACGGCGGCATC 
CAGCAGCGCCTGGCTGGCAGTGACCCCGCTGACGATCCGCCGCACCTGCGGCCGGCCCTCGACCTGCAGGCC 
GTTCGGGCAGTAGTCCTGGATGCGCGCGGCATCCAGATAACGGTCGGCCTCTTCGACCAGGGTGCTCAGGGC 
GATAGCCATGCAAATTCCTCTTCATTCAGGCAGGGCGCGCCGCTCCTCTAA