ViewGene

Locus Name:
GeneID:
Location:

GeneID:6665
TrivialName: PA14_57700
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_57700
PAO1 Ortholog Locus:
Sequence Length:1938
Protein Length:645
Start: 5138270
Stop: 5140207
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCTGCGAGACGATCAGATCGCCTGGCGTTCGCGCAACAGGTCGAGCACCTGCTTCACGCCGTCCTCGAC
GCTCAGCGCCTGGGTATCGATCACCAGGTCGGCATCCAGCGGCACGTCGTAGGGGAAGGACTCGCCGGGGAT
ATTGTCCTCGCCCGCCGCATACAGCCCCTGGGGATCGCGTTCGCGGCAGACCTGCGGCGACGCCTGCACATA
GACGGTGATCAGGCGCTCGGCGCCGATCAGCGCCCTGGCCTGCTCGCGCCCTTCCGCGCTCGGCGCGACGAA
GGCGCAGAGGCTGATCAACCCGGCCTCGTTGAACTGCTTGGCGACATGGGCGGTACGCAGCCAGTTCTCGGT
GCGCCCGGCGCGGTCCTGCGGCAACCCCTTGTTCAGGTCGTGGCGCAGGTTCTGCCCGTCCAGCACGTAGAC
CGCGCGGCCCATATCGAACAGCTTGCGCTCCACGGCGTAGGCCAGGGTGCTCTTGCCGGCGCCGGAGAGGCC
GCTGAACAGTACGGTCGCCGGCTGCTGGCCGAAGCGGCCGGCACGCTCCTCGCGCGTCACATGGGCATTCGA
ACCGTGATGCGCGCTGCTGCCATGGGCCGCCGGCGGAGCGGAGACGATCATGCCGGCGCCAACGGTGCCGTT
GGTCAGGCGATCGATGACGATGAAGGCGCCGGTGGTGCGGTTCTGCTCATAGCCATCGAGCGCGATGGGCGC
GTCCAGGCTGACCTTGACCCTGGCGATCTCGTTCAGCTTCAGCTCGCTGCCCGGGGTCCGCTCCAGGGTATT
CACGTCCACCTTGTGGACGATGCTCGGAATCGAACCCGGCACATAGCTGGTAGCGCGCTTGATATCGTACTT
CTTGCCCGGAAGCATCGGCTCCTCGGCCATCCACACCAGCATGGCATCGAAGCCGTCGGTGACCAGCGGGCG
ATTGTCGGCATGCACCAGCATGTCGCCGCGGGAAACGTCGATCTCGTCTTCCAGGGTCAGGGTGACGGCCTG
GCCGGGACCGGCCTGCTCCAGTTCGCCCTCGAAGGTGACGATGGATTTCACCTTGCTGCCCTTGCCCGACGG
CAAGGCCACCACCTCGTCGCCCTTGCGCACCACGCCGCTGGCCAGGGTGCCGGCGAAACCGCGGAAGTTCAG
GTTCGGCCGGTTCACGTACTGCACCGGGAAGCGCATGTCATCGAGGTTGCGGTCGGCGGCGATCTCGACGGT
TTCGAGGATTTCCATCAGCGACTGGCCGGCGTACCAGGGCGAACGCTCGGACTTGTTGACCACGTTGTCGCC
CTTGAGCGCCGACATCGGCACGAAGTGCAGCGAACTGGTCTTCAGACCGATCTTCTCGGCAAAGGCCAGGTA
GTCGGCCTTGATCTGTTCGAAGACACCCTGGTCGAAGTCCTTCAGGTCCATCTTGTTGATGGCGACCACGAT
ATGCCGGATGCCCAGCAGGGACGCGATGAAACTGTGCCGGCGGGTCTGGGTCTGCACGCCGTAGCGGGCATC
GATCAGGATGATCGCCAGGTCGCAGGTCGAGGCACCGGTGGCCATGTTGCGGGTGTACTGCTCATGGCCGGG
CGTGTCGGCGATGATGAACTTGCGCTTGGCGGTGCTGAAGTAGCGGTACGCCACGTCGATGGTGATGCCCTG
CTCGCGCTCGGCCTGCAGGCCGTCGACCAGCAGCGCCAGGTCGACGTCGTCGCCCGTGGTGCCGACTTTCTT
CGAGTCGCGGGTGATGGCCTCGAGGTGATCCTCGTAGATCATCTTGGAGTCATGCAGCAGGCGCCCGATCAG
GGTGCTCTTGCCGTCATCGACGTTGCCGCAGGTAAGGAAGCGCAGCAGTTCCTTGCGTTCGTGCTGCCCCAG
GTAGGCGAGGATGTCCTCGCTGATCAGATCGGATTGATGAGACATGCTGCGTACCCTCAGAAATAG
Translation:
MAARRSDRLAFAQQVEHLLHAVLDAQRLGIDHQVGIQRHVVGEGLAGDIVLARRIQPLGIAFAADLRRRLHI
DGDQALGADQRPGLLAPFRARRDEGAEADQPGLVELLGDMGGTQPVLGAPGAVLRQPLVQVVAQVLPVQHVD
RAAHIEQLALHGVGQGALAGAGEAAEQYGRRLLAEAAGTLLARHMGIRTVMRAAAMGRRRSGDDHAGANGAV
GQAIDDDEGAGGAVLLIAIERDGRVQADLDPGDLVQLQLAARGPLQGIHVHLVDDARNRTRHIAGSALDIVL
LARKHRLLGHPHQHGIEAVGDQRAIVGMHQHVAAGNVDLVFQGQGDGLAGTGLLQFALEGDDGFHLAALARR
QGHHLVALAHHAAGQGAGETAEVQVRPVHVLHREAHVIEVAVGGDLDGFEDFHQRLAGVPGRTLGLVDHVVA
LERRHRHEVQRTGLQTDLLGKGQVVGLDLFEDTLVEVLQVHLVDGDHDMPDAQQGRDETVPAGLGLHAVAGI
DQDDRQVAGRGTGGHVAGVLLMAGRVGDDELALGGAEVAVRHVDGDALLALGLQAVDQQRQVDVVARGADFL
RVAGDGLEVILVDHLGVMQQAPDQGALAVIDVAAGKEAQQFLAFVLPQVGEDVLADQIGLMRHAAYPQK*
AnnotationID:6666GeneID:6665
AnnotatorUID: diggins
Modification Date/Time: 2005-05-02 21:09:28
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13096
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30425
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49667How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4401949Stop: 4403886
Length: 1938
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCTGCGAGACGATCAGATCGCCTGGCGTTCGCGCAACAGGTCGAGCACCTGCTTCACGCCGTCCTCGAC
GCTCAGCGCCTGGGTATCGATCACCAGGTCGGCATCCAGCGGCACGTCGTAGGGGAAGGACTCGCCGGGGAT
ATTGTCCTCGCCCGCCGCATACAGCCCCTGGGGATCGCGTTCGCGGCAGACCTGCGGCGACGCCTGCACATA
GACGGTGATCAGGCGCTCGGCGCCGATCAGCGCCCTGGCCTGCTCGCGCCCTTCCGCGCTCGGCGCGACGAA
GGCGCAGAGGCTGATCAACCCGGCCTCGTTGAACTGCTTGGCGACATGGGCGGTACGCAGCCAGTTCTCGGT
GCGCCCGGCGCGGTCCTGCGGCAACCCCTTGTTCAGGTCGTGGCGCAGGTTCTGCCCGTCCAGCACGTAGAC
CGCGCGGCCCATATCGAACAGCTTGCGCTCCACGGCGTAGGCCAGGGTGCTCTTGCCGGCGCCGGAGAGGCC
GCTGAACAGTACGGTCGCCGGCTGCTGGCCGAAGCGGCCGGCACGCTCCTCGCGCGTCACATGGGCATTCGA
ACCGTGATGCGCGCTGCTGCCATGGGCCGCCGGCGGAGCGGAGACGATCATGCCGGCGCCAACGGTGCCGTT
GGTCAGGCGATCGATGACGATGAAGGCGCCGGTGGTGCGGTTCTGCTCATAGCCATCGAGCGCGATGGGCGC
GTCCAGGCTGACCTTGACCCTGGCGATCTCGTTCAGCTTCAGCTCGCTGCCCGGGGTCCGCTCCAGGGTATT
CACGTCCACCTTGTGGACGATGCTCGGAATCGAACCCGGCACATAGCTGGTAGCGCGCTTGATATCGTACTT
CTTGCCCGGAAGCATCGGCTCCTCGGCCATCCACACCAGCATGGCATCGAAGCCGTCGGTGACCAGCGGGCG
ATTGTCGGCATGCACCAGCATGTCGCCGCGGGAAACGTCGATCTCGTCTTCCAGGGTCAGGGTGACGGCCTG
GCCGGGACCGGCCTGCTCCAGTTCGCCCTCGAAGGTGACGATGGATTTCACCTTGCTGCCCTTGCCCGACGG
CAAGGCCACCACCTCGTCGCCCTTGCGCACCACGCCGCTGGCCAGGGTGCCGGCGAAACCGCGGAAGTTCAG
GTTCGGCCGGTTCACGTACTGCACCGGGAAGCGCATGTCATCGAGGTTGCGGTCGGCGGCGATCTCGACGGT
TTCGAGGATTTCCATCAGCGACTGGCCGGCGTACCAGGGCGAACGCTCGGACTTGTTGACCACGTTGTCGCC
CTTGAGCGCCGACATCGGCACGAAGTGCAGCGAACTGGTCTTCAGACCGATCTTCTCGGCAAAGGCCAGGTA
GTCGGCCTTGATCTGTTCGAAGACACCCTGGTCGAAGTCCTTCAGGTCCATCTTGTTGATGGCGACCACGAT
ATGCCGGATGCCCAGCAGGGACGCGATGAAACTGTGCCGGCGGGTCTGGGTCTGCACGCCGTAGCGGGCATC
GATCAGGATGATCGCCAGGTCGCAGGTCGAGGCACCGGTGGCCATGTTGCGGGTGTACTGCTCATGGCCGGG
CGTGTCGGCGATGATGAACTTGCGCTTGGCGGTGCTGAAGTAGCGGTACGCCACGTCGATGGTGATGCCCTG
CTCGCGCTCGGCCTGCAGGCCGTCGACCAGCAGCGCCAGGTCGACGTCGTCGCCCGTGGTGCCGACTTTCTT
CGAGTCGCGGGTGATGGCCTCGAGGTGATCCTCGTAGATCATCTTGGAGTCATGCAGCAGGCGCCCGATCAG
GGTGCTCTTGCCGTCATCGACGTTGCCGCAGGTAAGGAAGCGCAGCAGTTCCTTGCGTTCGTGCTGCCCCAG
GTAGGCGAGGATGTCCTCGCTGATCAGATCGGATTGATGAGACATGCTGCGTACCCTCAGAAATAG