ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6661

TrivialName: PA14_57550

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_57550

PAO1 Ortholog Locus:

Sequence Length: 1290

Protein Length: 429

Start: 5126592

Stop: 5127881

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC49570.1| (AP005950) ribonuclease E [Bradyrhizobium japonicum USDA 110] Identities = 73/315 (23%), Positives = 105/315 (33%), Gaps = 58/315 (18%)

Sequence:

GTGCAGCGAATTGCTTTTTCATCAGCCAGTCACCCTTTCCGGAACCGGTTTGGTCTTCTCCATCCGGGTGTA
GAACGGCATCAGGATGAAGAAGGCGAAATACAGGACGGTGCAAACGCGCGACAGGGTAGTACCCAGCGGGCT
CGGAGCCTGGGCGCCGTAGTAGCCGAGGATCACGAAGGACACCGCGAAGATCACCAGCCACAGCTTGCTCAG
CCAGCCCTTGTAGCGGATCGAGCGAACCGGGCTGCGATCCAGCCACGGCAGGACGAACAGCACGGCGATCGC
CGCACCCATCGCCACCACGCCCATCAGCTTGTCCGGAACCGCGCGGAGGATCGCGTAGAACGGGGTGAAGTA
CCAGACCGGAGCGATGTGCTCGGGGGTCTTGAACTGGTTGGCCATCTCGAAGTTGGGCTTCTCGAGGAAGTA
GCCGCCCATTTCCGGGAAGAAGAAGATCACGGTGCAGAAGATGAACAGGAACACCACCACACCGACGATATC
CTTCACGGTGTAGTACGGATGGAACGCGATGCCGTCCAGCGGTACGCCGTTCTCGTCCTTCTTCTTCTTGAT
GTCAACGCCGTCCGGGTTGTTCGAACCGACTTCGTGCAGCGCCAGGATGTGCAGCACGACCAGGCCGAGCAG
GACGATCGGCAGGGCGATCACATGCAGGGCGAAGAAGCGGTTCAGGGTGATGCCGGAGATCAGGAAGTCACC
GCGGATCCACTGGGCCAGGTCTTCGCCGACCACCGGAATCGCGCCGAACAGGGAAATGATCACCTGGGCGCC
CCAGTAGGACATCTGACCCCAAGGCAGCAGGTAGCCCATGAAGGCCTCGGCCATCAGCGCCAGGTAGATCAG
CATGCCGAAGATCCACACCAGCTCGCGCGGCTTCTGATAGGAGCCGTAGAGCAGGCCGCGGAACATGTGCAG
GTAGACCACGATGAAGAACGCCGATGCACCGGTGGAGTGCATGTAGCGAATGATCCAGCCGTAGTCGACATC
GCGCATGATGTATTCGACGGAAGCGAACGCCTCTTCGGCCGACGGCGTGAAGCTCATGGTCAGCCAGATGCC
GGTGAGGATCTGGTTGACCAGCACCAGCAGCGCCAGGGAACCGAAGAAATACCAGAAGTTGAAGTTCTTCGG
TGCGTAGTACTTGCTCAGATGGTCTTCCCACATCTTGGTCGCGGGAAAACGCGCATCGACCCAAGCCATGAA
CTTGTTCATCAGGCTTTCTCCTGGTCCACGCCGATGGTGATGACGTCGTCAGCATCGAACGTATAA

Translation:

MQRIAFSSASHPFRNRFGLLHPGVERHQDEEGEIQDGANARQGSTQRARSLGAVVAEDHEGHREDHQPQLAQ
PALVADRANRAAIQPRQDEQHGDRRTHRHHAHQLVRNRAEDRVERGEVPDRSDVLGGLELVGHLEVGLLEEV
AAHFREEEDHGAEDEQEHHHTDDILHGVVRMERDAVQRYAVLVLLLLDVNAVRVVRTDFVQRQDVQHDQAEQ
DDRQGDHMQGEEAVQGDAGDQEVTADPLGQVFADHRNRAEQGNDHLGAPVGHLTPRQQVAHEGLGHQRQVDQ
HAEDPHQLARLLIGAVEQAAEHVQVDHDEERRCTGGVHVANDPAVVDIAHDVFDGSERLFGRRREAHGQPDA
GEDLVDQHQQRQGTEEIPEVEVLRCVVLAQMVFPHLGRGKTRIDPSHELVHQAFSWSTPMVMTSSASNV*

AnnotationID:6662 GeneID:6661

AnnotatorUID: diggins

Modification Date/Time: 2005-05-02 19:07:26

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16429

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30417