ViewGene
Locus Name:
GeneID:
Location:

GeneID:6653
TrivialName: PA14_57150
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_57150
PAO1 Ortholog Locus:
Sequence Length:810
Protein Length:269
Start: 5091347
Stop: 5090538
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK62518.1| (AY034092) putative minor silk ampullate protein [Micrococcus sp. 28]
Identities = 56/200 (28%), Positives = 75/200 (37%), Gaps = 31/200 (15%)
Sequence:
ATGCATCGAGGAATAGTTGGCCGCGGTGGCGTCGATCACCGCCCGGACATCCTCCAGCAGGCTCCTGGCGGC
GGCGTCGTAGCCGCTGGCGTGGAGCAACTGGCCGAGTTCGTCGCAAAGCGCGGCGATCTCTTCCGGGTGCTG
CCGCAGGCCGCCGTTGTGGCAATCGTGGAGGACGGTCAGCGGGTTGATCGCGCAGTTCAGGGCCAGCTTGCG
CCACAGGCGTTCGAGGATGTCGTCGCTCCAGCTGTGCGGGATCCCGGCCTGGGACAGCTGCGCCAGCCAGGC
GGGGGCGCTTGTGTCGCGCGGATCGCCGAGCCAGGTGTGCCCGCGGCCGGCGAAGACCACGCGGAAATCGCC
ATCGCGGAACGCGCCTTCGGTGCTGGAGGCGAACAGGCAGCGGCTGCGCGGCAGGCGGGCGGCGACCGCCTG
CTGGCTGCCCAGGCCGTTCTGCAGCAACAGCAGTTCGGCGTTGCCGGCCAGGCGATGGGCCACGCTGGAGGC
GGCTTCCTCCGCGTCGTAGGCCTTGCAGGCCAGCAGCAGGCGCTGGATGGGTTGCCCGCCGTCCGGGGTTTC
CGCGGCGATCGGGTAGAGGCTGGCCTGGCCGTCTTCCACCAGGTTCAGTCCGCCGGCCTGTTGGTAGCGGCG
CAGGCGCTGGCGGTCGCGCAGGATCAGGCGGACGGGCAGGCCGGCGCGCCCGAGGCGCGCGGCCCAGAGGCT
GCCGAGGCTACCGGCGCCGAGGATATGCCAGGTCATGGTGGCTACTGCGAATGGCTGACGATAGAGCGAAGT
CTAGCGCAGTGCCGGTAG
Translation:
MHRGIVGRGGVDHRPDILQQAPGGGVVAAGVEQLAEFVAKRGDLFRVLPQAAVVAIVEDGQRVDRAVQGQLA
PQAFEDVVAPAVRDPGLGQLRQPGGGACVARIAEPGVPAAGEDHAEIAIAERAFGAGGEQAAAARQAGGDRL
LAAQAVLQQQQFGVAGQAMGHAGGGFLRVVGLAGQQQALDGLPAVRGFRGDRVEAGLAVFHQVQSAGLLVAA
QALAVAQDQADGQAGAPEARGPEAAEATGAEDMPGHGGYCEWLTIERSLAQCR*
AnnotationID:6654GeneID:6653
AnnotatorUID: diggins
Modification Date/Time: 2005-05-02 13:01:00
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:13074




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30401




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49655How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4355023Stop: 4354214

          
Length: 810


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGCATCGAGGAATAGTTGGCCGCGGTGGCGTCGATCACCGCCCGGACATCCTCCAGCAGGCTCCTGGCGGC 
GGCGTCGTAGCCGCTGGCGTGGAGCAACTGGCCGAGTTCGTCGCAAAGCGCGGCGATCTCTTCCGGGTGCTG 
CCGCAGGCCGCCGTTGTGGCAATCGTGGAGGACGGTCAGCGGGTTGATCGCGCAGTTCAGGGCCAGCTTGCG 
CCACAGGCGTTCGAGGATGTCGTCGCTCCAGCTGTGCGGGATCCCGGCCTGGGACAGCTGCGCCAGCCAGGC 
GGGGGCGCTTGTGTCGCGCGGATCGCCGAGCCAGGTGTGCCCGCGGCCGGCGAAGACCACGCGGAAATCGCC 
ATCGCGGAACGCGCCTTCGGTGCTGGAGGCGAACAGGCAGCGGCTGCGCGGCAGGCGGGCGGCGACCGCCTG 
CTGGCTGCCCAGGCCGTTCTGCAGCAACAGCAGTTCGGCGTTGCCGGCCAGGCGATGGGCCACGCTGGAGGC 
GGCTTCCTCCGCGTCGTAGGCCTTGCAGGCCAGCAGCAGGCGCTGGATGGGTTGCCCGCCGTCCGGGGTTTC 
CGCGGCGATCGGGTAGAGGCTGGCCTGGCCGTCTTCCACCAGGTTCAGTCCGCCGGCCTGTTGGTAGCGGCG 
CAGGCGCTGGCGGTCGCGCAGGATCAGGCGGACGGGCAGGCCGGCGCGCCCGAGGCGCGCGGCCCAGAGGCT 
GCCGAGGCTACCGGCGCCGAGGATATGCCAGGTCATGGTGGCTACTGCGAATGGCTGACGATAGAGCGAAGT 
CTAGCGCAGTGCCGGTAG