ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6650

TrivialName: PA14_56860

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 15:03:25

LocusName: PA14_56860

PAO1 Ortholog Locus:

Sequence Length: 1281

Protein Length: 426

Start: 5067001

Stop: 5065721

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAF43113.1| (AF202898) type I polyketide synthase [Streptomyces coelicolor A3(2)] Identities = 80/348 (22%), Positives = 123/348 (35%), Gaps = 50/348 (14%)

Sequence:

ATGCCGAGAGCGCCCCGTTTCGGGGCGAATCCGACACATTACGTGCAGCTTTCAAGGCTTGTCAAAGCACAG
GATTGGCGAAAGATTTCAAGCGTGTTGCAGGTCGCTTCCGACTTTCGCGGACCGGTATGGCGAGAGGTTGAT
GCCGCGCTCTCAGGCCAGGTGCAGGTGGTTGTCCCAGAGGCCGGCAGGCAGCTCCAGCGGTTGCGCGGCGAT
GCGCTCGCCCTGGCAGTCGTAGAAGCGGCAACGGCCCTGTCCGGATGTGACGACGAAGCCGTTCTTCACCGC
GCCCACGCCGGCGCAGTCCGGCAACGGCGCGTCGAGGCGTACGGCACCGCTGTCCAGGTCCCAGATGAAGAA
ACGGTTGCCGCGCGGGGCGGTCAGGGCCACCAGGCGCAGGTCGTCGTGGATCGCCACGCTGGCGGTGTACTG
GGCCATCGCCAGGCGCTGCTCCTCGGCCACCGGGAAGGCTTCGAAGGGACGGCCGGGGCGCTTGATCGCCAG
CAGGTCGGCATGTTCGTGGGCATCGCCCATGAACTGCTGGCCGGCGACGATGGTGCCGTCGCGACCGATCGC
CAGGTGGCGGACGCTGTTCATCTGCTGCGCCAGGGTTTCCTTGGACAGCAGATTGCCGTCGCGGCGCATCAG
CACCAGGCTGGGCTCCATGGCGTCGAGGTTCATCTCGACCCGGCTTTCCGCCTCGGTGCGAATGCCGCCGTT
GGCCACTACCAGGGTCTCGCCGTCGGGCATCCAGGAAACCTGGTGCGGCCCGAGGCCGTGGGTGGAGATCTC
GCCGCTGTGCTGCAGTCGCTCGCCGTCGAAACGGTAGACGCCGAGCACGCCGCGACCGGGATCGGTAGTGTC
GTTCTCGGTGGCGTAGAGCCACTCGCCGCTCTGGTGGAACACGCCGTGGCCGTAGAAGTGGCGGTCTTTCTG
CGAGACCAGGGTCTGCAGCAGGCGACCGTCGTTCAGGTCGATCAGGTAGCTTTCGGTGCCTGGCCGGCGGGC
GACGAACAGCGCCAGCGGCAGGCTCGGGTGCTGGACGATGTCGTGGCAGCGCTGGGCCACGCGGGTGGCGAA
CTGGCACTTGCCGTCCAGGCGGTAGCCCACCGCGTAATGCTGGCCATCGGCGTCGTCGCGCGCCGACAGCAC
CAGCGGTTGGCTACCCTGGCGGTTGAAGCTCCAGCCGCCGAAGGACAAGGCGCCGAGCAGCAGGCTGCCCAG
GCCGATCACATGACGTCGCAGCATGGTGCCAACCTCAGTCGCCATCGTTGGCGTTGA

Translation:

MPRAPRFGANPTHYVQLSRLVKAQDWRKISSVLQVASDFRGPVWREVDAALSGQVQVVVPEAGRQLQRLRGD
ALALAVVEAATALSGCDDEAVLHRAHAGAVRQRRVEAYGTAVQVPDEETVAARGGQGHQAQVVVDRHAGGVL
GHRQALLLGHREGFEGTAGALDRQQVGMFVGIAHELLAGDDGAVATDRQVADAVHLLRQGFLGQQIAVAAHQ
HQAGLHGVEVHLDPAFRLGANAAVGHYQGLAVGHPGNLVRPEAVGGDLAAVLQSLAVETVDAEHAATGIGSV
VLGGVEPLAALVEHAVAVEVAVFLRDQGLQQATVVQVDQVAFGAWPAGDEQRQRQARVLDDVVAALGHAGGE
LALAVQAVAHRVMLAIGVVARRQHQRLATLAVEAPAAEGQGAEQQAAQADHMTSQHGANLSRHRWR*

AnnotationID:6651 GeneID:6650

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 15:03:39

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:13068

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30395