ViewGene
Locus Name:
GeneID:
Location:

GeneID:6644
TrivialName: PA14_56610
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 19:07:23
LocusName:PA14_56610
PAO1 Ortholog Locus:
Sequence Length:474
Protein Length:157
Start: 5044986
Stop: 5045459
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCGGTCGCGACAGCCTCCGCGACATGCCGCCCAGCACTTCACGCAAGACCGCGAACTCGCGGTAGCTGCC
CAGCCAGTCCTGGGCCGCCATCCGCGGCGCGATGCGCGCCAGGCGCTCCGGCAGCGGCGAGGCGGTGCGCAG
GGTGCCGTAGACCCGCTCGACGAACTGCGGCAGCGGTTCGTCGGCGTAGTCGTTCCAGTCGCGCGCCAGGCA
GTGGTCGAAGAACACGTCCAGCAGGACGCCGGCGAAACGCCGGCGCTCCAGCGGGAAGCGCCGCTTGGCCGC
ATGCACCAGTGGGTGGCTGTCGGTGAAGGCGTCGATGCGCCGGTGCAACTGGATGGCCCGCTCGATCTCGTC
CGGCCATTGTCCCTGCAGGCGGCCCTTGACGAAGTCGCCGTACAGGCTGCCGAGCAGTTGGGCCGGTTGCGG
GCCGCCGAGGTGGAGATGCGCGAGGTAGTTCATGCGGGCTAG
Translation:
MRSRQPPRHAAQHFTQDRELAVAAQPVLGRHPRRDARQALRQRRGGAQGAVDPLDELRQRFVGVVVPVARQA
VVEEHVQQDAGETPALQREAPLGRMHQWVAVGEGVDAPVQLDGPLDLVRPLSLQAALDEVAVQAAEQLGRLR
AAEVEMREVVHAG*
AnnotationID:6645GeneID:6644
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 19:07:43
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16412




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30384




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49646How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4308662Stop: 4309135

          
Length: 474


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCGGTCGCGACAGCCTCCGCGACATGCCGCCCAGCACTTCACGCAAGACCGCGAACTCGCGGTAGCTGCC 
CAGCCAGTCCTGGGCCGCCATCCGCGGCGCGATGCGCGCCAGGCGCTCCGGCAGCGGCGAGGCGGTGCGCAG 
GGTGCCGTAGACCCGCTCGACGAACTGCGGCAGCGGTTCGTCGGCGTAGTCGTTCCAGTCGCGCGCCAGGCA 
GTGGTCGAAGAACACGTCCAGCAGGACGCCGGCGAAACGCCGGCGCTCCAGCGGGAAGCGCCGCTTGGCCGC 
ATGCACCAGTGGGTGGCTGTCGGTGAAGGCGTCGATGCGCCGGTGCAACTGGATGGCCCGCTCGATCTCGTC 
CGGCCATTGTCCCTGCAGGCGGCCCTTGACGAAGTCGCCGTACAGGCTGCCGAGCAGTTGGGCCGGTTGCGG 
GCCGCCGAGGTGGAGATGCGCGAGGTAGTTCATGCGGGCTAG