ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6636

TrivialName: PA14_56330

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_56330

PAO1 Ortholog Locus:

Sequence Length: 1425

Protein Length: 474

Start: 5028142

Stop: 5026718

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680] Identities = 143/457 (31%), Positives = 167/457 (36%), Gaps = 82/457 (17%)

Sequence:

GTGAAATACTCCCTGcCCAccacgggccaccgCGCCgTtcTGtccctCGGCGGTCAGCCACAGCGTGGCGGT
GCCGGCCGACgccTcGCCGCTGCGCAAGCTGGCGCTGTTCGTCGGCCCCGGCCTGCTGGTCTCGGTCGGCTA
CATGGACCCCGGCAACTGGGCCACCGCCATCGAGGCGGGCTCGCGCTTCGGCTACGCGCTGCTGTTCGTGGT
GGTGCTGGCGAGCTTTTCCGGGATGCTCCTGCAAAGCCTCTGTTCGCGCCTGGGGATCGCCACCGGCCGCGA
CCTCGCGCAGCTCTCCCGGGAGCGCTATCGCCCTGGCGTGGCGCGTGGCCAATGGCTGCTGGCGGAACTGTC
GATCGTCGCCACCGACCTTGCCGAGGTGCTCGGCGCGGCGCTGGCCTTCCACCTGCTGCTGGGCGTCTCGAT
TACCACCGGGGTGGTCCTCACCGCCTTCGATACCCTGATCGTGCTGGCCCTGCAGGGCGCCAACTTCCGCCG
CCTGGAGGCCATAGTGCTGGGGCTGATCGCGACCATCGGCGCGTGTTTCTTCGTCGAACTGGTGCTGATCGG
CCCCTACTGGCCGGATGTCGCCGCCGGCCTGCGGCCATCCTGGGACACCCTGAGCAGCCAGGAGCCGCTGTA
CCTGGCGATCGGCATCCTCGGCGCGACGGTGATGCCGCACAACCTCTACCTGCATTCGTCCGTGGTGCAGAC
CCGGGTCAGCGGCGACGACGCGGCGAGCAAACGCTCGGCGATCCGCTTTTCCCGGCTCGACACCATCGGCTC
GCTGTCCCTGGCGCTGCTGGTCAATGCGGCGATCCTGATCCTCGCCGCCGCGGCTTTCCACGGCAGCGGCCA
TACCGAGGTGGTGGAGATCCAGGACGCCTACCACCTGCTCGACCCGCTGGTGGGCGGCGCCCTGGCCAGCTT
CCTGTTCGGCTTCGCCCTGCTGGCGGCGGGGCAAAGCTCGACCTTCACCGGCACCATTGCCGGGCAGGTGGT
GATGGAGGGTTTCCTCCGGGCGAAGATTCCCTGCTGGCAGCGGCGCCTGATCACCCGCGGCCTGGCCCTGGT
GCCGGCCTTGATCGGCGTGCTCTGGCTGGGCGAAGGCGCGGTAGGCAAGCTGCTGGTGCTCAGCCAGGTGGT
GCTCAGCCTGCAATTGCCGTTCGCCCTGTGGCCGCTGATTCGCTTCAGCAGCGACCGGAACCTGATGGGGGA
GTTCGTCAACCCGCGCTGGGTCAGCGCGCTGGCCTGGTCGTTGTTCGGCCTGATCTCGGCGGCGAACCTGAC
CTTGCTGTATTTCTGGTTCGGCTGAACCAAGGCGCCTGCGGCGCTGCCAGTCCAGGCTCCGGCCAGTGGCCG
TACGAAAAAGCCCGGCGCGGGGCCGGGCTTTTCCAGGGATGGAGCAGGCTTACTTGA

Translation:

MKYSLPTTGHRAVLSLGGQPQRGGAGRRLAAAQAGAVRRPRPAGLGRLHGPRQLGHRHRGGLALRLRAAVRG
GAGELFRDAPAKPLFAPGDRHRPRPRAALPGALSPWRGAWPMAAGGTVDRRHRPCRGARRGAGLPPAAGRLD
YHRGGPHRLRYPDRAGPAGRQLPPPGGHSAGADRDHRRVFLRRTGADRPLLAGCRRRPAAILGHPEQPGAAV
PGDRHPRRDGDAAQPLPAFVRGADPGQRRRRGEQTLGDPLFPARHHRLAVPGAAGQCGDPDPRRRGFPRQRP
YRGGGDPGRLPPARPAGGRRPGQLPVRLRPAGGGAKLDLHRHHCRAGGDGGFPPGEDSLLAAAPDHPRPGPG
AGLDRRALAGRRRGRQAAGAQPGGAQPAIAVRPVAADSLQQRPEPDGGVRQPALGQRAGLVVVRPDLGGEPD
LAVFLVRLNQGACGAASPGSGQWPYEKARRGAGLFQGWSRLT*

AnnotationID:6637 GeneID:6636

AnnotatorUID: diggins

Modification Date/Time: 2005-04-04 16:04:41

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16401

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30368