ViewGene

Locus Name:
GeneID:
Location:

GeneID:6619
TrivialName: PA14_08770
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_08770
PAO1 Ortholog Locus:
Sequence Length:4068
Protein Length:1355
Start: 750279
Stop: 746212
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 213/820 (25%), Positives = 292/820 (35%), Gaps = 153/820 (18%)
Sequence:
GTGTTATTCGGTTTCCAGTTCGATGTCGATGCCGAGCGAACGGATCTCTTTGATCAGAACGTTGAAGGACTC
GGGCATGCCGGCCTCCATGCGGTGATCGCCGTCCACGATGTTCTTGTACATCTTGGTCCGGCCGTTCACGTC
GTCCGACTTGACCGTCAGCATTTCCTGCAGGGTGTACGCCGCGCCATAGGCTTCCAGCGCCCACACCTCCAT
CTCACCGAAGCGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGGGTAACCAGGCTGTACGAGCC
GGTGGAACGGGCGTGCATCTTGTCGTCCACCAGGTGGTTCAGCTTGAGCATGTACATGTAGCCGACGGTGGT
CGGACGCTCGAACTGGTTGCCGGTACGGCCGTCGAACAGACGCATCTGGCCGCTTTCCGGCAGGTCGGCCAG
CTTCAGCATGGCCTTGATCTCGCGTTCCTTGGCGCCATCGAACACCGGGGTCGCCATCGGTACGCCACCGCG
CAGGTTCTTGGCCAGCGCGAGGATCTCGTTGTCGCCCAGCTCGTCGAGGTTTTCCTCGCGACCGCCGATCTC
GTTGTAGATCTCGTGCAGGAACTTACGCAGTTCGGCGACCTTGCGCTGCTCTTCGAGCATGCGGTTGATCTT
CTCGCCCAGCCCCTTGGCCGCGAGGCCCAGGTGGGTTTCGAGGATCTGGCCGACGTTCATACGCGACGGTAC
GCCCAACGGGTTGAGGACGATGTCGACCGGGGTGCCGTTGGCATCGTGCGGCATGTCTTCCACCGGCATGAT
CACCGAGACCACACCCTTGTTACCGTGACGGCCGGCCATCTTGTCGCCCGGCTGGATGCGACGCTTGATCGC
CAGGTAGACCTTGACGATCTTCAGCACGCCCGGAGCCAAGTCGTCGCCCTGCTGCAGCTTGCGCTTCTTGTC
CTCGAACTTGTCGTCCAGGAGCTGGCGACGATCGCTGATGTAGGCCTGGGCCTTCTCCAGCTGTTCGTTCAG
GGCGTCGTCGGCCATGCGCAGCTTGAACCACTGGCCGCGCTCGAGGCCGTCGAGGTAGTCGTCGGTGATCTC
CGTACCCTTCTTCAGCGCCGGGCCACCTTCAGCCTTGGCACCGACCAGGGCGGCACGCAGACGCTCGAAGGT
CGCGCCTTCGACGATGCGGAACTCTTCGTTCAGGTCCTTGCGGATCTGGTCGAGTTGCATCTTCTCGATGGA
CAGAGCGCGGGAGTCGCGCTCGACGCCGTCGCGGGTGAAGACCTGAACGTCGATGACGGTACCCTTGGTGCC
GGTCGGCACACGCAGGGAGGTGTCCTTCACGTCGGACGCCTTCTCACCGAAGATCGCGCGCAGCAGCTTCTC
TTCCGGAGTCAGCTGGGTCTCGCCTTTCGGAGTGACCTTGCCGACCAGGATGTCGCCGGCCTGCACTTCGGC
GCCGACGTAGACGATACCGGCTTCGTCCAGCTTGTTCAGCGCGGCCTCGCCCACGTTCGGGATGTCCGCGGT
GATTTCCTCTGGGCCGAGCTTGGTGTCACGAGCGACGCAGGTCAGTTCCTGGATGTGGATCGTGGTGAAACG
ATCTTCCTGGACCACGCGCTCGGACAGGCAGATGGAGTCTTCGAAGTTGAAGCCGTTCCAGGGCATGAACGC
TACGCGCATGTTCTGGCCCAGGGCCAGTTCGCCCATGTCGGTGGACGGACCGTCGGCCAGGATGTCGCCGCG
CGCAACCACGTCACCCTTGCTCACCAGCGGACGCTGGTTGATGCAGGTGTTCTGGTTGGAACGGGTGTACTT
GGTCAGGTTGTAGATGTCGACACCCGCTTCGCCGGTCTCGACCTCGTCATCCGCCACGCGAACCACGACACG
GCTGGCATCGACCGAGTCGATCACACCACCACGGCGAGCCACGACGCAGACGCCGGAGTCGCGCGCCACGTT
GCGCTCCATGCCGGTACCCACCAGCGGCTTGTCGGCACGCAGGGTCGGCACGGCCTGACGCTGCATGTTCGA
GCCCATGAGTGCGCGGTTGGCGTCATCGTGCTCGAGGAACGGAATCAGCGAGGCAGCTACGGAAACGACCTG
CTTCGGCGACACGTCCATCAGGGTCACGTCTTCCGGCGCCTTCACGGTGAATTCGTTCAGGTGACGCACGGC
CACCAGTTCGTCCACCAGTTGACCCTTCTCGTTGAGGGTCGCCGAAGCCTGGGCAATGACGTGGTCGGCTTC
TTCGATCGCCGACAGGAACACGATCTCGTCGGTTACCAGGCTGTCCTTGACTACGCGGTACGGGCTCTCGAG
GAAGCCGTACTTGTTGGTGCGGGCGTAGGTCGCCAGGGAGTTGATCAGACCGATGTTCGGACCTTCAGGGGT
TTCGATCGGGCACACGCGGCCGTAGTGGGTCGGGTGTACGTCACGAACCTCGAAGCCCGCACGCTCACGGGT
CAGACCGCCCGGGCCGAGCGCGGAGACGCGGCGCTTGTGGGTGATCTCGGAAAGCGGGTTGTTCTGGCCCAT
GAACTGCGACAGCTGGCTCGAACCGAAGAACTCCTTGATCGCGGCAGCCACCGGCTTGGCGTTGATCAGGTC
CTGCGGCATCAGGCCTTCGCTTTCGGCCATGGACAGGCGTTCCTTGACCGCGCGCTCGACGCGCACCAGGCC
CACGCGGAACTGGTTCTCGGCCATTTCGCCGACGCAACGGACGCGACGGTTGCCCAGGTGGTCGATGTCATC
GACGATGCCCTTGCCGTTACGGATGTCGACGAGGGTCTTGAGCACATCGATGATGTCTTCCTTGCTCAGGAC
GCCCGGACCTTCGATCTCGGTACGACCGATACGGCGGTTGAACTTCATCCGGCCCACGGCCGACAGGTCGTA
ACGCTCGGCGCTGAAGAACAGGTTGCCGAACAGGGTCTCGGCAGCTTCCTTGGTCGGCGGCTCGCCCGGACG
CATCATCCGGTAGATTTCGACCAGGGCTTCCAGCTGGTTGCTGGTGTTGTCGATCTTCAGGGTGTCGGAGAT
GAACGGACCGCAGTCGATGTCGTTGGTGTACAGAGTCTCGATGCGCACGACCTGGGCCTTGGCCACCTTGGC
CAGGAGGTCGAGGGTCAGCTCGGTGTTGCACTCGGCGATGATCTCGCCGGTAGCCGGATGCACGATCGCCTT
GGCGATGGTACGGCCGATCAGGTAGTCGAACGGCACTTCCAGCTGGCTCACGCCAGCCTTTTCCAGCTGGTT
GATGTGGCGGGCAGTGATACGACGCCCCTGCTCCACGATCACCTTGCCGCTGCCATCCTTGATGTCGATGCT
CGCGACTTCACCGCGCAGACGCTGCGGGACCAGTTCCAGGTTCAGGGTCTCGCCCTTGATGTGGAAGACGTT
GGTCGCGTAGAAGGCGTTGAGGATCTCTTCGGTGCTGTAGCCGAGCGCGCGCAGCAGTACCGAGGCCGGCAG
CTTGCGGCGACGGTCGATACGGACGAACACGCAGTCCTTCGGATCGAACTCGAAGTCCAGCCAGGAACCGCG
GTAAGGAATGATCCGCGCGGAGTACAGCAGCTTGCCGGAGCTGTGGGTCTTGCCACGGTCGTGGTCGAAGAA
CACGCCCGGGGAACGGTGCAGCTGGGAGACGATGACACGCTCGGTACCGTTGATGATGAAGGTACCGTTCTC
GGTCATCAGGGGGATTTCCCCCATGTAGACTTCTTGTTCCTTGATGTCCTTGATCGCCTTGTTCGACGACTC
GCGGTCGAAGATGATCAGGCGAACTTTCACGCGCAGCGGTACGGCGAAGGTCACGCCGCGCAGCACGCACTC
CTTGACATCGAATGCCGGCTCACCCAGACGGTAGCCGACGTATTCCAGGGCAGCATTGCCGGAATAGCTGAT
AATCGGGAAAACGGACTTGAAGGCCGCGTGCAGACCGATATCGCGGAACTGCTCCTTGGTTGCGCCAGCCTG
CAGGAATTCGCGATAGGAATCCAGCTGGATGGCCAGCAAATACGGCACATCCATGACGTCCGGCAACTTGCT
AAAGTCCTTGCGGATACGTTTTTTCTCAGTGTATGA
Translation:
MLFGFQFDVDAERTDLFDQNVEGLGHAGLHAVIAVHDVLVHLGPAVHVVRLDRQHFLQGVRRAIGFQRPHLH
LTEALTTELCLTTQRLLGNQAVRAGGTGVHLVVHQVVQLEHVHVADGGRTLELVAGTAVEQTHLAAFRQVGQ
LQHGLDLAFLGAIEHRGRHRYATAQVLGQREDLVVAQLVEVFLATADLVVDLVQELTQFGDLALLFEHAVDL
LAQPLGREAQVGFEDLADVHTRRYAQRVEDDVDRGAVGIVRHVFHRHDHRDHTLVTVTAGHLVARLDATLDR
QVDLDDLQHARSQVVALLQLALLVLELVVQELATIADVGLGLLQLFVQGVVGHAQLEPLAALEAVEVVVGDL
RTLLQRRATFSLGTDQGGTQTLEGRAFDDAELFVQVLADLVELHLLDGQSAGVALDAVAGEDLNVDDGTLGA
GRHTQGGVLHVGRLLTEDRAQQLLFRSQLGLAFRSDLADQDVAGLHFGADVDDTGFVQLVQRGLAHVRDVRG
DFLWAELGVTSDAGQFLDVDRGETIFLDHALGQADGVFEVEAVPGHERYAHVLAQGQFAHVGGRTVGQDVAA
RNHVTLAHQRTLVDAGVLVGTGVLGQVVDVDTRFAGLDLVIRHANHDTAGIDRVDHTTTASHDADAGVARHV
ALHAGTHQRLVGTQGRHGLTLHVRAHECAVGVIVLEERNQRGSYGNDLLRRHVHQGHVFRRLHGEFVQVTHG
HQFVHQLTLLVEGRRSLGNDVVGFFDRRQEHDLVGYQAVLDYAVRALEEAVLVGAGVGRQGVDQTDVRTFRG
FDRAHAAVVGRVYVTNLEARTLTGQTARAERGDAALVGDLGKRVVLAHELRQLARTEELLDRGSHRLGVDQV
LRHQAFAFGHGQAFLDRALDAHQAHAELVLGHFADATDATVAQVVDVIDDALAVTDVDEGLEHIDDVFLAQD
ARTFDLGTTDTAVELHPAHGRQVVTLGAEEQVAEQGLGSFLGRRLARTHHPVDFDQGFQLVAGVVDLQGVGD
ERTAVDVVGVQSLDAHDLGLGHLGQEVEGQLGVALGDDLAGSRMHDRLGDGTADQVVERHFQLAHASLFQLV
DVAGSDTTPLLHDHLAAAILDVDARDFTAQTLRDQFQVQGLALDVEDVGRVEGVEDLFGAVAERAQQYRGRQ
LAATVDTDEHAVLRIELEVQPGTAVRNDPRGVQQLAGAVGLATVVVEEHARGTVQLGDDDTLGTVDDEGTVL
GHQGDFPHVDFLFLDVLDRLVRRLAVEDDQANFHAQRYGEGHAAQHALLDIECRLTQTVADVFQGSIAGIAD
NRENGLEGRVQTDIAELLLGCASLQEFAIGIQLDGQQIRHIHDVRQLAKVLADTFFLSV*
AnnotationID:6620GeneID:6619
AnnotatorUID: diggins
Modification Date/Time: 2005-04-03 17:05:54
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16378
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30335
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49621How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4203660Stop: 4207727
Length: 4068
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGTTATTCGGTTTCCAGTTCGATGTCGATGCCGAGCGAACGGATCTCTTTGATCAGAACGTTGAAGGACTC
GGGCATGCCGGCCTCCATGCGGTGATCGCCGTCCACGATGTTCTTGTACATCTTGGTCCGGCCGTTCACGTC
GTCCGACTTGACCGTCAGCATTTCCTGCAGGGTGTACGCCGCGCCATAGGCTTCCAGCGCCCACACCTCCAT
CTCACCGAAGCGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGGGTAACCAGGCTGTACGAGCC
GGTGGAACGGGCGTGCATCTTGTCGTCCACCAGGTGGTTCAGCTTGAGCATGTACATGTAGCCGACGGTGGT
CGGACGCTCGAACTGGTTGCCGGTACGGCCGTCGAACAGACGCATCTGGCCGCTTTCCGGCAGGTCGGCCAG
CTTCAGCATGGCCTTGATCTCGCGTTCCTTGGCGCCATCGAACACCGGGGTCGCCATCGGTACGCCACCGCG
CAGGTTCTTGGCCAGCGCGAGGATCTCGTTGTCGCCCAGCTCGTCGAGGTTTTCCTCGCGACCGCCGATCTC
GTTGTAGATCTCGTGCAGGAACTTACGCAGTTCGGCGACCTTGCGCTGCTCTTCGAGCATGCGGTTGATCTT
CTCGCCCAGCCCCTTGGCCGCGAGGCCCAGGTGGGTTTCGAGGATCTGGCCGACGTTCATACGCGACGGTAC
GCCCAACGGGTTGAGGACGATGTCGACCGGGGTGCCGTTGGCATCGTGCGGCATGTCTTCCACCGGCATGAT
CACCGAGACCACACCCTTGTTACCGTGACGGCCGGCCATCTTGTCGCCCGGCTGGATGCGACGCTTGATCGC
CAGGTAGACCTTGACGATCTTCAGCACGCCCGGAGCCAAGTCGTCGCCCTGCTGCAGCTTGCGCTTCTTGTC
CTCGAACTTGTCGTCCAGGAGCTGGCGACGATCGCTGATGTAGGCCTGGGCCTTCTCCAGCTGTTCGTTCAG
GGCGTCGTCGGCCATGCGCAGCTTGAACCACTGGCCGCGCTCGAGGCCGTCGAGGTAGTCGTCGGTGATCTC
CGTACCCTTCTTCAGCGCCGGGCCACCTTCAGCCTTGGCACCGACCAGGGCGGCACGCAGACGCTCGAAGGT
CGCGCCTTCGACGATGCGGAACTCTTCGTTCAGGTCCTTGCGGATCTGGTCGAGTTGCATCTTCTCGATGGA
CAGAGCGCGGGAGTCGCGCTCGACGCCGTCGCGGGTGAAGACCTGAACGTCGATGACGGTACCCTTGGTGCC
GGTCGGCACACGCAGGGAGGTGTCCTTCACGTCGGACGCCTTCTCACCGAAGATCGCGCGCAGCAGCTTCTC
TTCCGGAGTCAGCTGGGTCTCGCCTTTCGGAGTGACCTTGCCGACCAGGATGTCGCCGGCCTGCACTTCGGC
GCCGACGTAGACGATACCGGCTTCGTCCAGCTTGTTCAGCGCGGCCTCGCCCACGTTCGGGATGTCCGCGGT
GATTTCCTCTGGGCCGAGCTTGGTGTCACGAGCGACGCAGGTCAGTTCCTGGATGTGGATCGTGGTGAAACG
ATCTTCCTGGACCACGCGCTCGGACAGGCAGATGGAGTCTTCGAAGTTGAAGCCGTTCCAGGGCATGAACGC
TACGCGCATGTTCTGGCCCAGGGCCAGTTCGCCCATGTCGGTGGACGGACCGTCGGCCAGGATGTCGCCGCG
CGCAACCACGTCACCCTTGCTCACCAGCGGACGCTGGTTGATGCAGGTGTTCTGGTTGGAACGGGTGTACTT
GGTCAGGTTGTAGATGTCGACACCCGCTTCGCCGGTCTCGACCTCGTCATCCGCCACGCGAACCACGACACG
GCTGGCATCGACCGAGTCGATCACACCACCACGGCGAGCCACGACGCAGACGCCGGAGTCGCGCGCCACGTT
GCGCTCCATGCCGGTACCCACCAGCGGCTTGTCGGCACGCAGGGTCGGCACGGCCTGACGCTGCATGTTCGA
GCCCATGAGTGCGCGGTTGGCGTCATCGTGCTCGAGGAACGGAATCAGCGAGGCAGCTACGGAAACGACCTG
CTTCGGCGACACGTCCATCAGGGTCACGTCTTCCGGCGCCTTCACGGTGAATTCGTTCAGGTGACGCACGGC
CACCAGTTCGTCCACCAGTTGACCCTTCTCGTTGAGGGTCGCCGAAGCCTGGGCAATGACGTGGTCGGCTTC
TTCGATCGCCGACAGGAACACGATCTCGTCGGTTACCAGGCTGTCCTTGACTACGCGGTACGGGCTCTCGAG
GAAGCCGTACTTGTTGGTGCGGGCGTAGGTCGCCAGGGAGTTGATCAGACCGATGTTCGGACCTTCAGGGGT
TTCGATCGGGCACACGCGGCCGTAGTGGGTCGGGTGTACGTCACGAACCTCGAAGCCCGCACGCTCACGGGT
CAGACCGCCCGGGCCGAGCGCGGAGACGCGGCGCTTGTGGGTGATCTCGGAAAGCGGGTTGTTCTGGCCCAT
GAACTGCGACAGCTGGCTCGAACCGAAGAACTCCTTGATCGCGGCAGCCACCGGCTTGGCGTTGATCAGGTC
CTGCGGCATCAGGCCTTCGCTTTCGGCCATGGACAGGCGTTCCTTGACCGCGCGCTCGACGCGCACCAGGCC
CACGCGGAACTGGTTCTCGGCCATTTCGCCGACGCAACGGACGCGACGGTTGCCCAGGTGGTCGATGTCATC
GACGATGCCCTTGCCGTTACGGATGTCGACGAGGGTCTTGAGCACATCGATGATGTCTTCCTTGCTCAGGAC
GCCCGGACCTTCGATCTCGGTACGACCGATACGGCGGTTGAACTTCATCCGGCCCACGGCCGACAGGTCGTA
ACGCTCGGCGCTGAAGAACAGGTTGCCGAACAGGGTCTCGGCAGCTTCCTTGGTCGGCGGCTCGCCCGGACG
CATCATCCGGTAGATTTCGACCAGGGCTTCCAGCTGGTTGCTGGTGTTGTCGATCTTCAGGGTGTCGGAGAT
GAACGGACCGCAGTCGATGTCGTTGGTGTACAGAGTCTCGATGCGCACGACCTGGGCCTTGGCCACCTTGGC
CAGGAGGTCGAGGGTCAGCTCGGTGTTGCACTCGGCGATGATCTCGCCGGTAGCCGGATGCACGATCGCCTT
GGCGATGGTACGGCCGATCAGGTAGTCGAACGGCACTTCCAGCTGGCTCACGCCAGCCTTTTCCAGCTGGTT
GATGTGGCGGGCAGTGATACGACGCCCCTGCTCCACGATCACCTTGCCGCTGCCATCCTTGATGTCGATGCT
CGCGACTTCACCGCGCAGACGCTGCGGGACCAGTTCCAGGTTCAGGGTCTCGCCCTTGATGTGGAAGACGTT
GGTCGCGTAGAAGGCGTTGAGGATCTCTTCGGTGCTGTAGCCGAGCGCGCGCAGCAGTACCGAGGCCGGCAG
CTTGCGGCGACGGTCGATACGGACGAACACGCAGTCCTTCGGATCGAACTCGAAGTCCAGCCAGGAACCGCG
GTAAGGAATGATCCGCGCGGAGTACAGCAGCTTGCCGGAGCTGTGGGTCTTGCCACGGTCGTGGTCGAAGAA
CACGCCCGGGGAACGGTGCAGCTGGGAGACGATGACACGCTCGGTACCGTTGATGATGAAGGTACCGTTCTC
GGTCATCAGGGGGATTTCCCCCATGTAGACTTCTTGTTCCTTGATGTCCTTGATCGCCTTGTTCGACGACTC
GCGGTCGAAGATGATCAGGCGAACTTTCACGCGCAGCGGTACGGCGAAGGTCACGCCGCGCAGCACGCACTC
CTTGACATCGAATGCCGGCTCACCCAGACGGTAGCCGACGTATTCCAGGGCAGCATTGCCGGAATAGCTGAT
AATCGGGAAAACGGACTTGAAGGCCGCGTGCAGACCGATATCGCGGAACTGCTCCTTGGTTGCGCCAGCCTG
CAGGAATTCGCGATAGGAATCCAGCTGGATGGCCAGCAAATACGGCACATCCATGACGTCCGGCAACTTGCT
AAAGTCCTTGCGGATACGTTTTTTCTCAGTGTATGA