ViewGene

Locus Name:
GeneID:
Location:

GeneID:6618
TrivialName: PA14_09060
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09060
PAO1 Ortholog Locus:
Sequence Length:1395
Protein Length:464
Start: 769788
Stop: 768394
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCCATCGCGACGGATGATTTTGCAGTTACGGCACAGCTTCTTGACCGATGCACGAACTTTCATCACCAAC
TCCTCGAACCTTACGGGTCTATCAGCGCAGCATGCCGCTGCCGTAGCCCTTCAGGTTGGCTTTCTTCATCAG
GGATTCATACTGGTGAGAAACGAGGTGAGATTGCACCTGGGCCATAAAGTCCATGACAACCACGACCACGAT
CAACAGCGAGGTCCCGCCAAGATAGAACGGCACGTGCGCCGCAACCACCAGGAACTGGGGCAGCAGGCAGAC
AGCCGTCATGTACAGAGCACCGAACATGGTCAAACGGGTCAGCACGCCATCGATGTAGCGAGCGGACTGTTC
GCCCGGACGGATGCCCGGAATAAATGCACCGGACTTCTTGAGGTTCTCCGCCACGTCCTTCGGGTTGAACAT
CAGCGCTGTATAGAAGAAGCAGAAGAAAACGATCCCTGCAGTGAACAGCAAGATGTTCAGCGGCTGCCCCGG
AGCGATCGCTTGCGCGACGTCCTGCAACCAACCCAAGCCTTCCGACTGACCGAACCAGGAGCCCAGGGACGC
CGGGAACAGCAGGATACTGCTGGCGAAAATCGCGGGAATCACACCCGCCATGTTCACCTTCAACGGCAGATG
GCTGGTCTGCGCTGCAAACACCTTGCGGCCTTGCTGGCGCTTGGCGTAATGCACCGCGATGCGACGCTGGCC
ACGCTCGATGAACACCACGAACGCGATGATCGCCACGGCCAGCAGGCCGACGCCGATCAGGGCGAAGATGTT
GATGTCACCTTGACGGGCAGACTCGAAAGACTGACCGATGGCGCGCGGCAGGCCTGCAACGATACCAGCGAA
GATCAACATCGAGATGCCGTTGCCGACACCGCGCTCGGTGATCTGCTCGCCCAGCCACATCATGAACATGGC
ACCAGCCACGAAGGTGGTGACAGCCACGAAGTAGAAGCCGAAGTCGTTGGAGAAGGCTACGCCCTGGCTGCC
CAGGCCAACGGACATGCCGATGGCCTGGACCAGTGCCAGGACTACAGTACCGTAGCGGGTGTACTGGCTGAT
CTTGCGACGCCCAGACTCACCCTCTTTCTTCAACTGCTCCAGCTGCGGGCTGATAGCGGTCATGAGCTGCAT
GATGATCGAAGCCGAGATGTACGGCATGATCCCCAGTGCAAAGATACTCATGCGCTCCAGCGCGCCGCCGGA
AAACATGTTGAAGAGGCTAAGAATGGTCCCCTCGTTCTGCCGGAACAGTGCCGCCAAGCGATCGGGGTTGAT
GCCCGGAACTGGGATGTGCGCGCCGATCCGATAGACGATGATCGCCAGGAACAGGAAACGCAGACGTGCCCA
GAGCTCGGACAGACCGCCGTTGCTTAG
Translation:
MPSRRMILQLRHSFLTDARTFITNSSNLTGLSAQHAAAVALQVGFLHQGFILVRNEVRLHLGHKVHDNHDHD
QQRGPAKIERHVRRNHQELGQQADSRHVQSTEHGQTGQHAIDVASGLFARTDARNKCTGLLEVLRHVLRVEH
QRCIEEAEENDPCSEQQDVQRLPRSDRLRDVLQPTQAFRLTEPGAQGRREQQDTAGENRGNHTRHVHLQRQM
AGLRCKHLAALLALGVMHRDATLATLDEHHERDDRHGQQADADQGEDVDVTLTGRLERLTDGARQACNDTSE
DQHRDAVADTALGDLLAQPHHEHGTSHEGGDSHEVEAEVVGEGYALAAQANGHADGLDQCQDYSTVAGVLAD
LATPRLTLFLQLLQLRADSGHELHDDRSRDVRHDPQCKDTHALQRAAGKHVEEAKNGPLVLPEQCRQAIGVD
ARNWDVRADPIDDDRQEQETQTCPELGQTAVA*
AnnotationID:6619GeneID:6618
AnnotatorUID: diggins
Modification Date/Time: 2005-04-01 13:01:43
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13010
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30333
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49620How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4184151Stop: 4185545
Length: 1395
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCATCGCGACGGATGATTTTGCAGTTACGGCACAGCTTCTTGACCGATGCACGAACTTTCATCACCAAC
TCCTCGAACCTTACGGGTCTATCAGCGCAGCATGCCGCTGCCGTAGCCCTTCAGGTTGGCTTTCTTCATCAG
GGATTCATACTGGTGAGAAACGAGGTGAGATTGCACCTGGGCCATAAAGTCCATGACAACCACGACCACGAT
CAACAGCGAGGTCCCGCCAAGATAGAACGGCACGTGCGCCGCAACCACCAGGAACTGGGGCAGCAGGCAGAC
AGCCGTCATGTACAGAGCACCGAACATGGTCAAACGGGTCAGCACGCCATCGATGTAGCGAGCGGACTGTTC
GCCCGGACGGATGCCCGGAATAAATGCACCGGACTTCTTGAGGTTCTCCGCCACGTCCTTCGGGTTGAACAT
CAGCGCTGTATAGAAGAAGCAGAAGAAAACGATCCCTGCAGTGAACAGCAAGATGTTCAGCGGCTGCCCCGG
AGCGATCGCTTGCGCGACGTCCTGCAACCAACCCAAGCCTTCCGACTGACCGAACCAGGAGCCCAGGGACGC
CGGGAACAGCAGGATACTGCTGGCGAAAATCGCGGGAATCACACCCGCCATGTTCACCTTCAACGGCAGATG
GCTGGTCTGCGCTGCAAACACCTTGCGGCCTTGCTGGCGCTTGGCGTAATGCACCGCGATGCGACGCTGGCC
ACGCTCGATGAACACCACGAACGCGATGATCGCCACGGCCAGCAGGCCGACGCCGATCAGGGCGAAGATGTT
GATGTCACCTTGACGGGCAGACTCGAAAGACTGACCGATGGCGCGCGGCAGGCCTGCAACGATACCAGCGAA
GATCAACATCGAGATGCCGTTGCCGACACCGCGCTCGGTGATCTGCTCGCCCAGCCACATCATGAACATGGC
ACCAGCCACGAAGGTGGTGACAGCCACGAAGTAGAAGCCGAAGTCGTTGGAGAAGGCTACGCCCTGGCTGCC
CAGGCCAACGGACATGCCGATGGCCTGGACCAGTGCCAGGACTACAGTACCGTAGCGGGTGTACTGGCTGAT
CTTGCGACGCCCAGACTCACCCTCTTTCTTCAACTGCTCCAGCTGCGGGCTGATAGCGGTCATGAGCTGCAT
GATGATCGAAGCCGAGATGTACGGCATGATCCCCAGTGCAAAGATACTCATGCGCTCCAGCGCGCCGCCGGA
AAACATGTTGAAGAGGCTAAGAATGGTCCCCTCGTTCTGCCGGAACAGTGCCGCCAAGCGATCGGGGTTGAT
GCCCGGAACTGGGATGTGCGCGCCGATCCGATAGACGATGATCGCCAGGAACAGGAAACGCAGACGTGCCCA
GAGCTCGGACAGACCGCCGTTGCTTAG