ViewGene

Locus Name:
GeneID:
Location:

GeneID:6614
TrivialName: PA14_09140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09140
PAO1 Ortholog Locus:
Sequence Length:1386
Protein Length:461
Start: 774396
Stop: 773011
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGAACAGCGCGGCGGGCTGGCTGTAGTAGTCGTCGTCCACCCGGTGGTTCCAGTGGTCCGCCGCGCCCTC
CAGGCTCAGCGGCGGCTCGGAGAAGTCAGGCTGCTCCTGCCACTGGTTGAAGCTGTTCGGCTCGTAGGTGAC
GCGCTGATGGGCGTTGTTGCCGTCCACCCGCATGCCGCCGTCGCGGTGGTAGACCTGGTGCGGGCAACGCGC
GGCGTTCACCGGGATCTGGTGGTGGTTGACGCCCAGGCGATAGCGATGGGCGTCGCCGTAGGAGAACAGACG
GCCCTGGAGCATCTTGTCCGGCGAGAAACCGATACCGGGCACCACGTTGGCCGGCGTGAAAGCGGCCTGCTC
GACCTCGGCGAAGTAGTTGTCCGGGTTACGGTTCAGCTCGAAGAAGCCCACTTCGATCAACGGGTAGTCACC
GTGGGGCCAGACCTTGGTCAGGTCGAACGGGTTGTAGCGATAGGTGGCCGCTTCCTTCTCGGGCATGATCTG
CACGTACATCTTCCAGCGCGGGAAGTCGCCTTTCTCGATGCTCTCGTACAAGTCGCGCTGCGAACTCTCGCG
GTCCTGGGCGATCACTTCGGCAGCCTCGGCGTTGGTCAGGTTCTCGATGCCCTGTTGGGTCTTGAAGTGGAA
CTTGACCCAGAAGCGCTCGTTGTTCGCATTGATGAAGCTGAAGGTATGGCTGCCGAAACCATGGATGTGCCG
ATAGCTCTTCGGCAGACCGCGGTCGCTGAAGTCGATGGTCAACTGATGCAGCGACTCGGGGAGGTGAGAGAA
AAAGTCCCACTTGAAGGTCGCATTGCGCAGGTTGGTGCGCGGGTCACGCTTCACCACGTGGTTGAGATCGGG
GAACTTGAGCGGGTCGCGCAGATAGAACACCGGGGTGTTGTTGCCGACCAGGTCCCAGTTGCCCTGCTCGGT
GTAGAAACGCATGGAGAAGCCGCGGATGTCTCGCTCTGCATCCGCCGCGCCACGCTCACCGGCGACGGTGGA
GAAGCGCAGGAACATATCGGTCTTCTTGCCGACCTGGGAGAAGATCTTCGCCCGGGTGTAGGGGGTGATGTC
ATGGGTGACGGTGAAGGTGCCATAGGCCGCGGAGCCTTTCGCATGCATGCGGCGCTCGGGGATCACTTCGCG
ATCGAAGTGGGCGAGCTTCTCGAGGAACCACACGTCCTGCAGCAACATCGGGCCACGCGGACCGGCGGTCTG
CACGTTCTGGTTATCGACCACCGGTGCGCCAGCGGCAGTGGTCAGGCGGGTCTTCTCTTCCATTTACTCTCT
CCTCAACGGCTAACGTGCTATGAAGCGAAGCGGCTACACGGAAATCATCAGCGTGGACCAGGGATTGGCGGA
GGACAACCTCCAGGCTGA
Translation:
MEQRGGLAVVVVVHPVVPVVRRALQAQRRLGEVRLLLPLVEAVRLVGDALMGVVAVHPHAAVAVVDLVRATR
GVHRDLVVVDAQAIAMGVAVGEQTALEHLVRRETDTGHHVGRRESGLLDLGEVVVRVTVQLEEAHFDQRVVT
VGPDLGQVERVVAIGGRFLLGHDLHVHLPAREVAFLDALVQVALRTLAVLGDHFGSLGVGQVLDALLGLEVE
LDPEALVVRIDEAEGMAAETMDVPIALRQTAVAEVDGQLMQRLGEVREKVPLEGRIAQVGARVTLHHVVEIG
ELERVAQIEHRGVVADQVPVALLGVETHGEAADVSLCIRRATLTGDGGEAQEHIGLLADLGEDLRPGVGGDV
MGDGEGAIGRGAFRMHAALGDHFAIEVGELLEEPHVLQQHRATRTGGLHVLVIDHRCASGSGQAGLLFHLLS
PQRLTCYEAKRLHGNHQRGPGIGGGQPPG*
AnnotationID:6615GeneID:6614
AnnotatorUID: diggins
Modification Date/Time: 2005-04-01 12:12:18
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:13003
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30325
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49616How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4179542Stop: 4180927
Length: 1386
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGAACAGCGCGGCGGGCTGGCTGTAGTAGTCGTCGTCCACCCGGTGGTTCCAGTGGTCCGCCGCGCCCTC
CAGGCTCAGCGGCGGCTCGGAGAAGTCAGGCTGCTCCTGCCACTGGTTGAAGCTGTTCGGCTCGTAGGTGAC
GCGCTGATGGGCGTTGTTGCCGTCCACCCGCATGCCGCCGTCGCGGTGGTAGACCTGGTGCGGGCAACGCGC
GGCGTTCACCGGGATCTGGTGGTGGTTGACGCCCAGGCGATAGCGATGGGCGTCGCCGTAGGAGAACAGACG
GCCCTGGAGCATCTTGTCCGGCGAGAAACCGATACCGGGCACCACGTTGGCCGGCGTGAAAGCGGCCTGCTC
GACCTCGGCGAAGTAGTTGTCCGGGTTACGGTTCAGCTCGAAGAAGCCCACTTCGATCAACGGGTAGTCACC
GTGGGGCCAGACCTTGGTCAGGTCGAACGGGTTGTAGCGATAGGTGGCCGCTTCCTTCTCGGGCATGATCTG
CACGTACATCTTCCAGCGCGGGAAGTCGCCTTTCTCGATGCTCTCGTACAAGTCGCGCTGCGAACTCTCGCG
GTCCTGGGCGATCACTTCGGCAGCCTCGGCGTTGGTCAGGTTCTCGATGCCCTGTTGGGTCTTGAAGTGGAA
CTTGACCCAGAAGCGCTCGTTGTTCGCATTGATGAAGCTGAAGGTATGGCTGCCGAAACCATGGATGTGCCG
ATAGCTCTTCGGCAGACCGCGGTCGCTGAAGTCGATGGTCAACTGATGCAGCGACTCGGGGAGGTGAGAGAA
AAAGTCCCACTTGAAGGTCGCATTGCGCAGGTTGGTGCGCGGGTCACGCTTCACCACGTGGTTGAGATCGGG
GAACTTGAGCGGGTCGCGCAGATAGAACACCGGGGTGTTGTTGCCGACCAGGTCCCAGTTGCCCTGCTCGGT
GTAGAAACGCATGGAGAAGCCGCGGATGTCTCGCTCTGCATCCGCCGCGCCACGCTCACCGGCGACGGTGGA
GAAGCGCAGGAACATATCGGTCTTCTTGCCGACCTGGGAGAAGATCTTCGCCCGGGTGTAGGGGGTGATGTC
ATGGGTGACGGTGAAGGTGCCATAGGCCGCGGAGCCTTTCGCATGCATGCGGCGCTCGGGGATCACTTCGCG
ATCGAAGTGGGCGAGCTTCTCGAGGAACCACACGTCCTGCAGCAACATCGGGCCACGCGGACCGGCGGTCTG
CACGTTCTGGTTATCGACCACCGGTGCGCCAGCGGCAGTGGTCAGGCGGGTCTTCTCTTCCATTTACTCTCT
CCTCAACGGCTAACGTGCTATGAAGCGAAGCGGCTACACGGAAATCATCAGCGTGGACCAGGGATTGGCGGA
GGACAACCTCCAGGCTGA