ViewGene

Locus Name:
GeneID:
Location:

GeneID:6610
TrivialName: PA14_09250
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09250
PAO1 Ortholog Locus:
Sequence Length:1995
Protein Length:664
Start: 783576
Stop: 785570
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAF12376.1|AE001863_1 (AE001863) adenine deaminase-related protein [Deinococcus radiodurans]
Identities = 114/353 (32%), Positives = 132/353 (37%), Gaps = 79/353 (22%)
Sequence:
ATGCTCGGGATCGGCGCGCTGGCTGACCACCACGCGGCCGCCGGCCAGCAGCGTGCCGATCACTCCGGGGCA
GCAGAGGGTGAAGTTGTGCGCCATCGGCAAGCCGGTGAGGTACACCGTGTGCTCGTCGAAGCCGCAGACCTC
GGCGCTGGCGCGGACGTTGTAGAGATACTCGCGATGACGCCGGGGAATCAGCTTCGGCGTGCCGGTGGTGCC
GCCGGACAACTGGAAGCAGGCGATATCCTCGGCGCGGGCGGCGCAGTCTTCCAGCGCGTCGGCCTGGTACAG
CGGTGCCAGCGCTTGCAGCGGCGCCTCGGCCTCGCCGTGGATCAGCGCCATCCGGCAGGCGCCGCTGGCGAG
CAGCTCACGGGCCATCGGCCGTGGGTCGAAGCCGTCGATCCGTTCGGCGCCGATGTAGGCCTTGGCCTCGGC
GAACCGGCAGAAACCGCTGATCTCATGCTGGCGATGGGCGGGGAGGGCGAGCACCGGGCGTACGCCGAGCTG
GAACAGGGCGAAGCAGGTCTCGACGAAGGCGATGCCGTTGGGCAGGTGCAGCACCACCGTGTCGCCATGTGC
GAGGCCGGCCTGGCGCAGTCCGGCTGCCAGGCGGCGGCAGCGCTGGAGCAGGTCGGCATAGCTGAGCCGCTG
GTCGTCGTCGCAGAGTGCGATCCGCCGCGGATGGCGCGCGGCGCTGGCGGCCAGGGCTTCGGCGAAGTTCTG
GTCCTGCCAGTGGCCGGCGTCGAGATAGCGGCGGACGAAGGCGGCGGGCCAGTCGGGGGCGTCGTCGACGGC
CGATGGGGTGGCGGGCGAGGAAGTCATGCGATCTCCGTGGATGCGGTCGATTGCCATTGCTGGGAAATGAGA
TTTATTATCATTGGCGGGCGGCAGGGACCGCGCAAGCCCGCGCCTTTCGATTGCGGGGCTTTTTCATTCGCT
GCAGGGGCGGAGTGCAGGACGCGTTGTCCATCTCCGCTAAAAGGTCCCCCTGTCCCCACGTATCCAGGAAGG
CGTCGCCGCGTCGGCAGCGCCCGGGCTACAGGAAAACCTGATGACCATCACCATCATTGCTCCGCCACAGGC
CGATGCCGCCGCGCCGGCACCGGGCAACCGGCCCGGCGTCGCGCACATCGATCCGAATATGAAGCTGGTGAC
CGGAACCTTCTGTTCGGCCAGCGAGGACTGGTTCGAGGAACCGCTGGAGCGCGGCCTGCGCCTGATCCTCGT
GCAGAGCGGCCAGTTGCGCTGCCGGATTCCCGGCCAGCCCGAGCACCTCATCGAGGGGCCGAGCCTGTGCAC
CATCGCCAACGATGGCGACTTCACCTCGGCGCAGATCTACGGCACCGACAAGCCGTTGCGCTACACCATCGT
CCAGCTCGGCGTCGAAGCCCTGGACAGCCGCCTCGGCTGGCTGCCCGAGCAACTGATACGCCGCCCCGGCGG
CGATCCGCGGATCATGAGCTGCCCGGCGCCGCGGGCGATGCAGGCGTTGGCCTCGCAGATCGCCACCTGCCA
GATGCTCGGTCCGACCCGCGATCTCTACCTCGGCGGCAAGGCCCTGGAGTTGGCCGCGCTCAGCGCCCAGTT
CCTTTCCGGCGAGGGGCGCCCCGTCGAGGAGCCGCGCATCACCTGCTCGGAGGTCGAGCGCATCCACGCCGC
CCGCGACCTGCTGGTCGGCGCCTTGCAGGAACCACCGTCGCTGGACACGCTGGCCAGCCGCGTGGGCATGAA
CCCGCGCAAGCTGACCGCCGGCTTCCGCAAGGTGTTCGGCGCCAGCGTATTCGGCTACCTGCAGGAGTACCG
CCTGCGCGAGGCGCACCGGATGCTCTGCGACGAAGAGGCGAACGTCTCCACGGTGGCCTACCGGGTGGGCTA
CAGCCCGGCGCATTTCTCCATCGCTTTCCGCAAGCGCTACGGCATCTCCCCCAGCGAGATCCGCTGAGTCTC
CGCGACGACCCCCGACCCGGCCACGGGAGGGGCGTCGCCGCTGCGGGATGA
Translation:
MLGIGALADHHAAAGQQRADHSGAAEGEVVRHRQAGEVHRVLVEAADLGAGADVVEILAMTPGNQLRRAGGA
AGQLEAGDILGAGGAVFQRVGLVQRCQRLQRRLGLAVDQRHPAGAAGEQLTGHRPWVEAVDPFGADVGLGLG
EPAETADLMLAMGGEGEHRAYAELEQGEAGLDEGDAVGQVQHHRVAMCEAGLAQSGCQAAAALEQVGIAEPL
VVVAECDPPRMARGAGGQGFGEVLVLPVAGVEIAADEGGGPVGGVVDGRWGGGRGSHAISVDAVDCHCWEMR
FIIIGGRQGPRKPAPFDCGAFSFAAGAECRTRCPSPLKGPPVPTYPGRRRRVGSARATGKPDDHHHHCSATG
RCRRAGTGQPARRRAHRSEYEAGDRNLLFGQRGLVRGTAGARPAPDPRAERPVALPDSRPARAPHRGAEPVH
HRQRWRLHLGADLRHRQAVALHHRPARRRSPGQPPRLAARATDTPPRRRSADHELPGAAGDAGVGLADRHLP
DARSDPRSLPRRQGPGVGRAQRPVPFRRGAPRRGAAHHLLGGRAHPRRPRPAGRRLAGTTVAGHAGQPRGHE
PAQADRRLPQGVRRQRIRLPAGVPPARGAPDALRRRGERLHGGLPGGLQPGAFLHRFPQALRHLPQRDPLSL
RDDPRPGHGRGVAAAG*
AnnotationID:6611GeneID:6610
AnnotatorUID: diggins
Modification Date/Time: 2005-04-01 07:07:27
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12996
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30317
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49612How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4170361Stop: 4168367
Length: 1995
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCTCGGGATCGGCGCGCTGGCTGACCACCACGCGGCCGCCGGCCAGCAGCGTGCCGATCACTCCGGGGCA
GCAGAGGGTGAAGTTGTGCGCCATCGGCAAGCCGGTGAGGTACACCGTGTGCTCGTCGAAGCCGCAGACCTC
GGCGCTGGCGCGGACGTTGTAGAGATACTCGCGATGACGCCGGGGAATCAGCTTCGGCGTGCCGGTGGTGCC
GCCGGACAACTGGAAGCAGGCGATATCCTCGGCGCGGGCGGCGCAGTCTTCCAGCGCGTCGGCCTGGTACAG
CGGTGCCAGCGCTTGCAGCGGCGCCTCGGCCTCGCCGTGGATCAGCGCCATCCGGCAGGCGCCGCTGGCGAG
CAGCTCACGGGCCATCGGCCGTGGGTCGAAGCCGTCGATCCGTTCGGCGCCGATGTAGGCCTTGGCCTCGGC
GAACCGGCAGAAACCGCTGATCTCATGCTGGCGATGGGCGGGGAGGGCGAGCACCGGGCGTACGCCGAGCTG
GAACAGGGCGAAGCAGGTCTCGACGAAGGCGATGCCGTTGGGCAGGTGCAGCACCACCGTGTCGCCATGTGC
GAGGCCGGCCTGGCGCAGTCCGGCTGCCAGGCGGCGGCAGCGCTGGAGCAGGTCGGCATAGCTGAGCCGCTG
GTCGTCGTCGCAGAGTGCGATCCGCCGCGGATGGCGCGCGGCGCTGGCGGCCAGGGCTTCGGCGAAGTTCTG
GTCCTGCCAGTGGCCGGCGTCGAGATAGCGGCGGACGAAGGCGGCGGGCCAGTCGGGGGCGTCGTCGACGGC
CGATGGGGTGGCGGGCGAGGAAGTCATGCGATCTCCGTGGATGCGGTCGATTGCCATTGCTGGGAAATGAGA
TTTATTATCATTGGCGGGCGGCAGGGACCGCGCAAGCCCGCGCCTTTCGATTGCGGGGCTTTTTCATTCGCT
GCAGGGGCGGAGTGCAGGACGCGTTGTCCATCTCCGCTAAAAGGTCCCCCTGTCCCCACGTATCCAGGAAGG
CGTCGCCGCGTCGGCAGCGCCCGGGCTACAGGAAAACCTGATGACCATCACCATCATTGCTCCGCCACAGGC
CGATGCCGCCGCGCCGGCACCGGGCAACCGGCCCGGCGTCGCGCACATCGATCCGAATATGAAGCTGGTGAC
CGGAACCTTCTGTTCGGCCAGCGAGGACTGGTTCGAGGAACCGCTGGAGCGCGGCCTGCGCCTGATCCTCGT
GCAGAGCGGCCAGTTGCGCTGCCGGATTCCCGGCCAGCCCGAGCACCTCATCGAGGGGCCGAGCCTGTGCAC
CATCGCCAACGATGGCGACTTCACCTCGGCGCAGATCTACGGCACCGACAAGCCGTTGCGCTACACCATCGT
CCAGCTCGGCGTCGAAGCCCTGGACAGCCGCCTCGGCTGGCTGCCCGAGCAACTGATACGCCGCCCCGGCGG
CGATCCGCGGATCATGAGCTGCCCGGCGCCGCGGGCGATGCAGGCGTTGGCCTCGCAGATCGCCACCTGCCA
GATGCTCGGTCCGACCCGCGATCTCTACCTCGGCGGCAAGGCCCTGGAGTTGGCCGCGCTCAGCGCCCAGTT
CCTTTCCGGCGAGGGGCGCCCCGTCGAGGAGCCGCGCATCACCTGCTCGGAGGTCGAGCGCATCCACGCCGC
CCGCGACCTGCTGGTCGGCGCCTTGCAGGAACCACCGTCGCTGGACACGCTGGCCAGCCGCGTGGGCATGAA
CCCGCGCAAGCTGACCGCCGGCTTCCGCAAGGTGTTCGGCGCCAGCGTATTCGGCTACCTGCAGGAGTACCG
CCTGCGCGAGGCGCACCGGATGCTCTGCGACGAAGAGGCGAACGTCTCCACGGTGGCCTACCGGGTGGGCTA
CAGCCCGGCGCATTTCTCCATCGCTTTCCGCAAGCGCTACGGCATCTCCCCCAGCGAGATCCGCTGAGTCTC
CGCGACGACCCCCGACCCGGCCACGGGAGGGGCGTCGCCGCTGCGGGATGA