ViewGene

Locus Name:
GeneID:
Location:

GeneID:6608
TrivialName: PA14_09330
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09330
PAO1 Ortholog Locus:
Sequence Length:2439
Protein Length:812
Start: 802423
Stop: 799985
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22771.1| (AE005754) hypothetical protein [Caulobacter crescentus CB15]
Identities = 196/789 (24%), Positives = 279/789 (35%), Gaps = 157/789 (19%)
Sequence:
GTGCCAGCAGGCTACCGCCCAGGCGCCAGGCGAAGTTGCCCGGATCACGCGCCAGCAACCCGCCGACAAGCA
GCAACAAGCCCACCCCGAGCGCGCCGAAGAGCCCGGCGTAGAGACGCTCGAGCGGGTCGTCCAGGGGCAGCC
CGCGAGTCAACAGATAGCCGCTGGCGGTCGCCGCCGCCAGGCTGCCGGCGAGTGCCAGCGGAACCCGCCAGG
CCCAGCCGAAGCCCGGCCGGCGCGGCATCAGAACGCGCCCCGCAGGCTGACGTTGAAGCTGCGCGGTTCGCC
GTAGCGGTTGTTCCAGTTGGGGTTGGACAGGCTCTGGTAGTAGGTCCGGTCGAACAGGTTGTTGACGTTGAC
CGCCGCCGTCCAGTGCTCGTCGATCTTGTAGCCCAGGCGCATGTTGACCAGTGCGTAGCCGCCCTGGCGCAT
GCTCACGCCACGGTAGTCGACGCTGTAGTCGCTCTGCGCCTGGAGTCCGCCGCCGACGCTCCAGCGCCGATC
CTGCCAGGGCAGATCGTAGTTGCTCCACAGGCGCAGCAGGTGCCTCGGGGTGAAGGTGGAGTAGCGCGTCCC
CGAGTCGTTCTGGCTGTCCTTGAGGTACTCGGTGCTGGTGTAGGTGTAGCCGGCCGAGAGACTCCAGTAGGG
CGTCAGGTAGCCTGTGCCTTCCAGCTCGAAGCCCTGGCTGCGCACCTTGCCGCCGCTGATGTAGAACGGATT
GTTGGGCGGCCCCGGATGGTCCGGGTCTTCCTGCGGATTGTTCTCCAGGTCGATGCGGAACGCCGCCAGCGA
CAGGTTCAGGCGGCCGTCGGCCAGTTCGCCCTTGATCCCGGTTTCGTAGGTCTTGCCTTCCACCGGGCTCAA
CGGCTCGCTGTTCCAGGTCTGGCGATCCGCCTGCGGCTGGTAGACCTCGGCGTAGCTGACATACCACGACCA
GTCCCTGGCGAAGTCCCAGATCAGCCCGCCGTAGGGCGTGAACTGGCGACCGGGCTTGAAGCGAGTGGCCGG
GGTGTCCTGGTCCCACCAGCTTTCGCGGCCGCCGACCACCAGGGTCAGCGGCTCGGCGAGCTTGATCCGACC
CAGGGCATAGAGGCCTTTCTGGGTGGTGGTGGTGGTGCCCGGCGAAGTGTACTGGCCGATCTGCGGGCGCGG
CACGCCGTGCGGGTCCCAGCGGTAGACATTGACCGGGGTGTTCGGCAGGTTGAGGAAGCGTGCGGTGTCCTG
GCGGGTCTCGCCCTGGGCGTAGGTGACCCCACCGAGCAGTTCGTGGGTCAGGCCGAACAGTCGCACCGGCCC
ATTGAGGTTGGCGTCGAGGCTGCGCTGGATGCTCTTGAACTTGTAGGCGGCGCCCATCAGCTGGCCACCGTC
GCCGGTCTGCGGGTCGATGGCGCCGAAGGAGCCGGCGTAACGCAGGCGCGAATCGGCTTCCTGGTATTCGGC
GCTGACCTTGCCTTTCCAGCCGCCGCCCAGTTGCTGTTCGAGGGAGCCGAAGGCGCGGTAGGTGTCCCACTT
GAAGCGGTCCCAGTCGACATCGAGGTAGGTGTCGCGGGACAGCCCGAGATTGGACCCATCCTTGGCCATCGG
CACCCCGGCCATGTTGGTGATCGAGTCGATGTGCTGGTATTGCGCGCCGACGGTGAGCAGGGTATCGGGGCT
CAGGTCGAACTCGGTCACCCCGTAGAGCAGGCGGGTGCCCTGGTCGGCCACGTCGTAGAAGTAGTCGCGGTC
CTCGTAGGCGGCCACCGCTCGGCCGCGCACGTTGCCGCTGGCGCTCAGCGGGCCGCCGACGTCGACCTCGGC
GCGGTAGCGGTCCCAGCGCCCGGCGCTGAGGGTGGTGCTGGCGGCGAATTCGCGCTGCGGCCGCTTGCGCAC
CAGGTTGACGGTGGCCGCCGGGTTGCCGGTGCCATGCAGCAGTCCGTTGGAGCCGCGAAGGATCTCGACCCG
CTCGTAGATCGCCATGTCCTGCGGCGAACTGGCAGTATTGCCAAGCAGCGCCGGCACCCCGTCCAGCTCGAA
GGAGTCGACCTTGAAGCCGCGCACGTAGTAGGCGGTGGTCAGCAGCTGGAACGGCTGCACGGTGACCCCGGT
GGCCTGCTGCATGGCTTCGTCGAGGCTGAACAGATTCTGCTGTTCGAGGCGCTCATGGTCGATGACGCTGGC
GGACTGCGGCAGCTCGCGCGGCTTGAGCGGCACCTTGCCCAGGGTAGTCACCCCCGGCGGCTGGGTGGCAGA
CGTGCTTTCTCCGCTGATCACCATGTCCGGCAGTTCCGTCTCGCCGTCCTTGCGCGCGTCGGCCACGGCCGC
CGCCAGCGGACTCAGCGCCAGCAGCAGCCCCAGGCACAACGGGGTGTGCCGATTGCGGGCGATGCCCTGGCG
TCCCTTGATCACCTTCGTCTCCGTTTTCATCGTTCGAACAGCCTCGGGGGATATACGATTTGA
Translation:
MPAGYRPGARRSCPDHAPATRRQAATSPPRARRRARRRDARAGRPGAARESTDSRWRSPPPGCRRVPAEPAR
PSRSPAGAASERAPQADVEAARFAVAVVPVGVGQALVVGPVEQVVDVDRRRPVLVDLVAQAHVDQCVAALAH
AHATVVDAVVALRLESAADAPAPILPGQIVVAPQAQQVPRGEGGVARPRVVLAVLEVLGAGVGVAGRETPVG
RQVACAFQLEALAAHLAAADVERIVGRPRMVRVFLRIVLQVDAERRQRQVQAAVGQFALDPGFVGLAFHRAQ
RLAVPGLAIRLRLVDLGVADIPRPVPGEVPDQPAVGRELATGLEASGRGVLVPPAFAAADHQGQRLGELDPT
QGIEAFLGGGGGARRSVLADLRARHAVRVPAVDIDRGVRQVEEACGVLAGLALGVGDPTEQFVGQAEQSHRP
IEVGVEAALDALELVGGAHQLATVAGLRVDGAEGAGVTQARIGFLVFGADLAFPAAAQLLFEGAEGAVGVPL
EAVPVDIEVGVAGQPEIGPILGHRHPGHVGDRVDVLVLRADGEQGIGAQVELGHPVEQAGALVGHVVEVVAV
LVGGHRSAAHVAAGAQRAADVDLGAVAVPAPGAEGGAGGEFALRPLAHQVDGGRRVAGAMQQSVGAAKDLDP
LVDRHVLRRTGSIAKQRRHPVQLEGVDLEAAHVVGGGQQLERLHGDPGGLLHGFVEAEQILLFEALMVDDAG
GLRQLARLERHLAQGSHPRRLGGRRAFSADHHVRQFRLAVLARVGHGRRQRTQRQQQPQAQRGVPIAGDALA
SLDHLRLRFHRSNSLGGYTI*
AnnotationID:6609GeneID:6608
AnnotatorUID: diggins
Modification Date/Time: 2005-04-01 06:06:27
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16374
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30313
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49610How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4151514Stop: 4153952
Length: 2439
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCCAGCAGGCTACCGCCCAGGCGCCAGGCGAAGTTGCCCGGATCACGCGCCAGCAACCCGCCGACAAGCA
GCAACAAGCCCACCCCGAGCGCGCCGAAGAGCCCGGCGTAGAGACGCTCGAGCGGGTCGTCCAGGGGCAGCC
CGCGAGTCAACAGATAGCCGCTGGCGGTCGCCGCCGCCAGGCTGCCGGCGAGTGCCAGCGGAACCCGCCAGG
CCCAGCCGAAGCCCGGCCGGCGCGGCATCAGAACGCGCCCCGCAGGCTGACGTTGAAGCTGCGCGGTTCGCC
GTAGCGGTTGTTCCAGTTGGGGTTGGACAGGCTCTGGTAGTAGGTCCGGTCGAACAGGTTGTTGACGTTGAC
CGCCGCCGTCCAGTGCTCGTCGATCTTGTAGCCCAGGCGCATGTTGACCAGTGCGTAGCCGCCCTGGCGCAT
GCTCACGCCACGGTAGTCGACGCTGTAGTCGCTCTGCGCCTGGAGTCCGCCGCCGACGCTCCAGCGCCGATC
CTGCCAGGGCAGATCGTAGTTGCTCCACAGGCGCAGCAGGTGCCTCGGGGTGAAGGTGGAGTAGCGCGTCCC
CGAGTCGTTCTGGCTGTCCTTGAGGTACTCGGTGCTGGTGTAGGTGTAGCCGGCCGAGAGACTCCAGTAGGG
CGTCAGGTAGCCTGTGCCTTCCAGCTCGAAGCCCTGGCTGCGCACCTTGCCGCCGCTGATGTAGAACGGATT
GTTGGGCGGCCCCGGATGGTCCGGGTCTTCCTGCGGATTGTTCTCCAGGTCGATGCGGAACGCCGCCAGCGA
CAGGTTCAGGCGGCCGTCGGCCAGTTCGCCCTTGATCCCGGTTTCGTAGGTCTTGCCTTCCACCGGGCTCAA
CGGCTCGCTGTTCCAGGTCTGGCGATCCGCCTGCGGCTGGTAGACCTCGGCGTAGCTGACATACCACGACCA
GTCCCTGGCGAAGTCCCAGATCAGCCCGCCGTAGGGCGTGAACTGGCGACCGGGCTTGAAGCGAGTGGCCGG
GGTGTCCTGGTCCCACCAGCTTTCGCGGCCGCCGACCACCAGGGTCAGCGGCTCGGCGAGCTTGATCCGACC
CAGGGCATAGAGGCCTTTCTGGGTGGTGGTGGTGGTGCCCGGCGAAGTGTACTGGCCGATCTGCGGGCGCGG
CACGCCGTGCGGGTCCCAGCGGTAGACATTGACCGGGGTGTTCGGCAGGTTGAGGAAGCGTGCGGTGTCCTG
GCGGGTCTCGCCCTGGGCGTAGGTGACCCCACCGAGCAGTTCGTGGGTCAGGCCGAACAGTCGCACCGGCCC
ATTGAGGTTGGCGTCGAGGCTGCGCTGGATGCTCTTGAACTTGTAGGCGGCGCCCATCAGCTGGCCACCGTC
GCCGGTCTGCGGGTCGATGGCGCCGAAGGAGCCGGCGTAACGCAGGCGCGAATCGGCTTCCTGGTATTCGGC
GCTGACCTTGCCTTTCCAGCCGCCGCCCAGTTGCTGTTCGAGGGAGCCGAAGGCGCGGTAGGTGTCCCACTT
GAAGCGGTCCCAGTCGACATCGAGGTAGGTGTCGCGGGACAGCCCGAGATTGGACCCATCCTTGGCCATCGG
CACCCCGGCCATGTTGGTGATCGAGTCGATGTGCTGGTATTGCGCGCCGACGGTGAGCAGGGTATCGGGGCT
CAGGTCGAACTCGGTCACCCCGTAGAGCAGGCGGGTGCCCTGGTCGGCCACGTCGTAGAAGTAGTCGCGGTC
CTCGTAGGCGGCCACCGCTCGGCCGCGCACGTTGCCGCTGGCGCTCAGCGGGCCGCCGACGTCGACCTCGGC
GCGGTAGCGGTCCCAGCGCCCGGCGCTGAGGGTGGTGCTGGCGGCGAATTCGCGCTGCGGCCGCTTGCGCAC
CAGGTTGACGGTGGCCGCCGGGTTGCCGGTGCCATGCAGCAGTCCGTTGGAGCCGCGAAGGATCTCGACCCG
CTCGTAGATCGCCATGTCCTGCGGCGAACTGGCAGTATTGCCAAGCAGCGCCGGCACCCCGTCCAGCTCGAA
GGAGTCGACCTTGAAGCCGCGCACGTAGTAGGCGGTGGTCAGCAGCTGGAACGGCTGCACGGTGACCCCGGT
GGCCTGCTGCATGGCTTCGTCGAGGCTGAACAGATTCTGCTGTTCGAGGCGCTCATGGTCGATGACGCTGGC
GGACTGCGGCAGCTCGCGCGGCTTGAGCGGCACCTTGCCCAGGGTAGTCACCCCCGGCGGCTGGGTGGCAGA
CGTGCTTTCTCCGCTGATCACCATGTCCGGCAGTTCCGTCTCGCCGTCCTTGCGCGCGTCGGCCACGGCCGC
CGCCAGCGGACTCAGCGCCAGCAGCAGCCCCAGGCACAACGGGGTGTGCCGATTGCGGGCGATGCCCTGGCG
TCCCTTGATCACCTTCGTCTCCGTTTTCATCGTTCGAACAGCCTCGGGGGATATACGATTTGA