ViewGene
Locus Name:
GeneID:
Location:

GeneID:6602
TrivialName: PA14_09590
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09590
PAO1 Ortholog Locus:
Sequence Length:1068
Protein Length:355
Start: 825805
Stop: 824738
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGTACCTTCAGCGCCAGACGCTGGGCCTCGGCGGCGATCGCCGGCGGCAGGTCGGCGGGAAACACCTCGCG
CACCGCGCCGGCCTGGTACTTGTGCTCGTAGTCGAAGACCTCCTGGCCGCCGAGGAGAATCTCGCCCACCGG
CAGCGCCTGGTCGTCGAGCACCCCGACGGTGACCTCGCGGCCGGCGACGAAGCGCTCCAGCATCACCTCGTC
GCCATAGCGCCCGGCCAGCTCGATAGCCGGCTGCAATTCGGCcTGGGAATGCACGATGGACAGCCCCACGGT
GGAGCCCTGGCTGTTCGGCTTGACCACCAGGGGGAAGCCCAGTTGCTCGCGCACCGCCTCTTCCGAGGCCGG
CGCCATCAGCCAACTGGCGGTCTCCACCCCGGCGGCGAGGAACAGGCGCTTGGCCACGTCCTTGTCCATCGC
CATGGCGCTGGCCAGGTGGCCGCTGCCGGTATAGGCGAAACCGCCGGCATCCAGCAGCGCCTGCAGGGTGCC
GTCCTCGCCGGTGCCGCCGTGCAGGGCGAGGAAGAACACGTCGACCCCAGCCAGTTCGCCGGCGCTCAGCAG
GCTCTGCTTGCCGCTGCGGATGATCGCCAGCGAGTCGGAGTCCGGCGGGACCTCCTTGACCTTGCTCGCCAG
CAGGCGGCGCTCTTCCTCCGCGCCGAGCAGGCCGCTGGCGGTATCCACCGCCAGCACCTGGTGGCCGGCGCT
GCGCAACGCCTGGATCACCTGCGCGCCGCTGGCGATGGAGACGTCCCGTTCCTCACTGCTGCCGCCGAAGAG
AACGGCGACCTTCAACTTGTCCTGTCCCATGTTCCACCTGTCGTTCCAGTGCTGGAGGCAGAAAAGCACAAC
ACAGGGGTAACTGAACAGAGACAGTCATCGTCGCGCGCAGCGAACGGCCTCCCTCAGCCGCGCAGTTCCTCG
ACCAGCGTGCGCAGCAGTTCGGCGGCCGGCAGCTCCCGCGCCAGCGCCGCGCCCTGGCCGGCCCACTGGGCG
GCGAAATCATGGTTGCCGCGAGTCAGAGCGGCGGTCTGCAACGCTTTGGTCGCGTCGTAG
Translation:
MYLQRQTLGLGGDRRRQVGGKHLAHRAGLVLVLVVEDLLAAEENLAHRQRLVVEHPDGDLAAGDEALQHHLV
AIAPGQLDSRLQFGLGMHDGQPHGGALAVRLDHQGEAQLLAHRLFRGRRHQPTGGLHPGGEEQALGHVLVHR
HGAGQVAAAGIGETAGIQQRLQGAVLAGAAVQGEEEHVDPSQFAGAQQALLAAADDRQRVGVRRDLLDLARQ
QAALFLRAEQAAGGIHRQHLVAGAAQRLDHLRAAGDGDVPFLTAAAEENGDLQLVLSHVPPVVPVLEAEKHN
TGVTEQRQSSSRAANGLPQPRSSSTSVRSSSAAGSSRASAAPWPAHWAAKSWLPRVRAAVCNALVAS*
AnnotationID:6603GeneID:6602
AnnotatorUID: danlee
Modification Date/Time: 2004-02-05 17:05:40
Gene Name:
Confidence Code:4
GeneProduct:hypothetical
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:16366




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30301




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49604How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 4128132Stop: 4129199

          
Length: 1068


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGTACCTTCAGCGCCAGACGCTGGGCCTCGGCGGCGATCGCCGGCGGCAGGTCGGCGGGAAACACCTCGCG 
CACCGCGCCGGCCTGGTACTTGTGCTCGTAGTCGAAGACCTCCTGGCCGCCGAGGAGAATCTCGCCCACCGG 
CAGCGCCTGGTCGTCGAGCACCCCGACGGTGACCTCGCGGCCGGCGACGAAGCGCTCCAGCATCACCTCGTC 
GCCATAGCGCCCGGCCAGCTCGATAGCCGGCTGCAATTCGGCcTGGGAATGCACGATGGACAGCCCCACGGT 
GGAGCCCTGGCTGTTCGGCTTGACCACCAGGGGGAAGCCCAGTTGCTCGCGCACCGCCTCTTCCGAGGCCGG 
CGCCATCAGCCAACTGGCGGTCTCCACCCCGGCGGCGAGGAACAGGCGCTTGGCCACGTCCTTGTCCATCGC 
CATGGCGCTGGCCAGGTGGCCGCTGCCGGTATAGGCGAAACCGCCGGCATCCAGCAGCGCCTGCAGGGTGCC 
GTCCTCGCCGGTGCCGCCGTGCAGGGCGAGGAAGAACACGTCGACCCCAGCCAGTTCGCCGGCGCTCAGCAG 
GCTCTGCTTGCCGCTGCGGATGATCGCCAGCGAGTCGGAGTCCGGCGGGACCTCCTTGACCTTGCTCGCCAG 
CAGGCGGCGCTCTTCCTCCGCGCCGAGCAGGCCGCTGGCGGTATCCACCGCCAGCACCTGGTGGCCGGCGCT 
GCGCAACGCCTGGATCACCTGCGCGCCGCTGGCGATGGAGACGTCCCGTTCCTCACTGCTGCCGCCGAAGAG 
AACGGCGACCTTCAACTTGTCCTGTCCCATGTTCCACCTGTCGTTCCAGTGCTGGAGGCAGAAAAGCACAAC 
ACAGGGGTAACTGAACAGAGACAGTCATCGTCGCGCGCAGCGAACGGCCTCCCTCAGCCGCGCAGTTCCTCG 
ACCAGCGTGCGCAGCAGTTCGGCGGCCGGCAGCTCCCGCGCCAGCGCCGCGCCCTGGCCGGCCCACTGGGCG 
GCGAAATCATGGTTGCCGCGAGTCAGAGCGGCGGTCTGCAACGCTTTGGTCGCGTCGTAG