ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6601

TrivialName: PA14_09620

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_09620

PAO1 Ortholog Locus:

Sequence Length: 1968

Protein Length: 655

Start: 826970

Stop: 828937

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE33233.1| (BX640445) autotransporter [Bordetella bronchiseptica] Identities = 103/329 (31%), Positives = 122/329 (37%), Gaps = 46/329 (13%)

Sequence:

TTGCGTCGTTTTTCAAGAATGCCTGGCCGGCTTCCCGGGCGTCGGAGGGCGAATAACCGCTTCGCGGTTATC
CGCCGTTATCGCGGGCTGTCGGCGGACAGCGCGCTGCATGCTGTCCCGAAAAAAACACGCGGCCCACGGGCC
GCGCGACAACGCTCGACGGAAGCTTCAGAACTGTTCCGCCTCCAGGCCGTACAGGCTTTCGCTGCCGGCTTC
GACGGCGGCGGCGAGGGAGTGCACGCGGGGCAGGATGCGGGCGAAGTAGAAGCGCGCGGTGGCCAGCTTGCC
GTCGTGGAACGCCGGGTCGGCCTCGCGCTGGCGCAGCGCGGCGGCGGCCATGCGCGCCCAGAGGTAGGCGTA
GGCGGTATAGCCGAACAGATGCAGGTATTCCACCGAGGCTGCGCCGATCTCGCGCGGGTCGTTGCCGGCGCG
GGCGACGATGCCCTGGGTGAGGTTGTCCAGCAGGTCCAGGGCGGTCAGCAGCGGGGTGACGAACTCCGCCAG
TTCGGCGTTGGCGCCGGCGGCGAAGGCTCGCACCTCGCGGCTGAAGATGGAGAGGAACAGCCCGCCGTTGGC
GACCACCTTGCGGCCCATCAGGTCGAGCGCCTGGATGCCGTTGGTGCCTTCGTAGATCTGCGCGATGCGTAC
GTCGCGCACCAGTTGCTCCTGGCCCCATTCGCGGATGTAGCCGTGGCCGCCGAACACCTGCTGGCCGAGCAC
GCAGCTCTCCAGGCCGGTATCGGTGAAGAAGGCCTTGGCCACCGGGGTCAACAGGGCCACCAGGGCTTCGGC
CTGGCTGCGTTCTTCCTGGTCCTCGGCGTACTTGGCCAGGTCGAGCTGCTGCCCGACATAGGTGGAAAAGGC
GCGGCCGCCCTCGGTCAGCGCCTTCATGGTGAGCAGCATGCGGCGCACGTCGGGGTGCACGATGATCGGGTC
GGCGGCCTTGTCCCTGGCCACCGGGCCGGTCGGCGCGCGGCTTTGCAGGCGCTCGCGGGCGTAGGCGACGGC
GCTCTGGTAGGACATCTCGGCGCAGCCGATGCCCTGGATGCCGATGGACAGGCGCTCGTAGTTCATCATGGT
GAACATCGCCGCCAGGCCCTTGTTGACTTCGCCGACCAGCCAGCCACTGGCGCCGTCGAAGTTCATCACGCA
GGTGGCCGAGGCCTTGATCCCCATCTTGTGCTCGATGGAGCCGCAGTGCACCGCGTTGCGTGCGCCGAGCGC
GCCGTCGTCGCCGACCAGGAACTTCGGCACCAGGAACAGCGAGATGCCGCGCGAACCGGCCGGCGCGTCGGG
CAGCTTGGCCAGCACCAGGTGAATGATGTTCTCGGTGAGGTCCTGTTCGCCGCCGGTGATGAAGATCTTCGT
CCCGCTGATCCTGTAGGAACCGTCGGCCTGCGGCTCGGCCTTGGTGCGGATGATGCCCAGGTCGGTGCCGGC
ATGCGGTTCGGTCAGACACATGGAGCCGGCCCAGGTGCCGGCGTACATGTTCGGCAGGTACCTGTTCTTCAG
CTCCTCGCTGCCGTGCGCATCGAGGGCCAGGCAGGCGCCGGCGGAAAGGGTCGAGTAGAGGCTGAAGCTGGC
GTTGGCCGCGTACATCATCTCCTCGAACTGCACTGCCAGCATCTTCGGCATGCCCATGCCGCCATGGGCCGG
ATTGCCGGTGAGGCCGACCCAGCCGCCCTCGGCGTAGGTCGCGTAGGCCTCGCGGAAGCCGGCCGGGGTGCG
CACGGCGCCGTCCTGCCACTGCGCGCCTTCTTCGTCGCCACTGCGGTTGAGCGGCGCGAGCAGGCCGCCGGT
GACCTTGGCCGCTTCCTCGAGGATGGCGTCGGCGGTGTCGGCGTCGATCCGCTCGGCCAGTCGCGGCAGGCG
CTGCCACAGGGCGGGGGCGTCGAACACGTCGTTGAGCAGGAAGCGCATGTCGCGCAGCGGGGCGTTGTATTC
AGGCATTGCACACCTCGTCGGTGA

Translation:

MRRFSRMPGRLPGRRRANNRFAVIRRYRGLSADSALHAVPKKTRGPRAARQRSTEASELFRLQAVQAFAAGF
DGGGEGVHAGQDAGEVEARGGQLAVVERRVGLALAQRGGGHARPEVGVGGIAEQMQVFHRGCADLARVVAGA
GDDALGEVVQQVQGGQQRGDELRQFGVGAGGEGSHLAAEDGEEQPAVGDHLAAHQVERLDAVGAFVDLRDAY
VAHQLLLAPFADVAVAAEHLLAEHAALQAGIGEEGLGHRGQQGHQGFGLAAFFLVLGVLGQVELLPDIGGKG
AAALGQRLHGEQHAAHVGVHDDRVGGLVPGHRAGRRAALQALAGVGDGALVGHLGAADALDADGQALVVHHG
EHRRQALVDFADQPATGAVEVHHAGGRGLDPHLVLDGAAVHRVACAERAVVADQELRHQEQRDAARTGRRVG
QLGQHQVNDVLGEVLFAAGDEDLRPADPVGTVGLRLGLGADDAQVGAGMRFGQTHGAGPGAGVHVRQVPVLQ
LLAAVRIEGQAGAGGKGRVEAEAGVGRVHHLLELHCQHLRHAHAAMGRIAGEADPAALGVGRVGLAEAGRGA
HGAVLPLRAFFVATAVERREQAAGDLGRFLEDGVGGVGVDPLGQSRQALPQGGGVEHVVEQEAHVAQRGVVF
RHCTPRR*

AnnotationID:6602 GeneID:6601

AnnotatorUID: diggins

Modification Date/Time: 2005-04-01 05:05:11

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits at any threshold.

Genomic Context:

Comment:

ReferenceID:16365

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30299