ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6593

TrivialName: PA14_09860

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_09860

PAO1 Ortholog Locus:

Sequence Length: 1332

Protein Length: 443

Start: 849218

Stop: 847887

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Overlaps GID3037 (PA14_09870) and GID4765 (PA14_09880). Homology: dbj|BAC70159.1| (AP005030) hypothetical protein [Streptomyces avermitilis MA-4680] Identities = 87/297 (29%), Positives = 111/297 (37%), Gaps = 41/297 (13%)

Sequence:

GTGCGGCGCGCTGCGCTACCGCCTGTCGTCGCCCCCGCGGGCGCTCTCCCACCGTCATTGCAGCCAGTGCCG
CAAGGCCCATGGGGCGGCATTCGCCAGTTATGGCAGCGTCCCCGTCGCGGACCTGCACATCGACCGCGGCGC
CGACCTGCTCGCCGCGTTCAGCTCCTCCCCCGCCGTGCTCCGGCGCTTCTGCTCGCGCTGCGGCTCGCCGCT
GTTCTGGTCAAGGAGCGAAGGCAAGTTCGCCGACTGGGTATCGGTCGCCCTCGGCAGCCTGGACACGCCCTT
CCCATCGGAGAAACAGAAGCATGTCCAGGTCGCGTCGATGGCCTGCTGGTACCGGATAGCCGACGACTGGCC
GCGGTTCGACTGAAGTCCGCCCGCGATCCGCCGGCCGGTGCCTGTTTTTTCGCCGGCAAAGCCCGGGCCTGG
GGTACCATGCCGCGCCCTTCGCCGCCGGTCCTTGCCGCCCATGTCCGCCACTGCGCTGTACACCGACCTGTC
CCACTATTACGACCTGATGTGCGCCGACATCGACTACCAGGCGCAGAGCCACTGCGTGCGTCGCCTGCACCA
GTTGTTCGGCAACCAGGGCCGGCGGCACCTGGACCTGGCCTGCGGTACCGGCCCTCACGTGAGGCACTTCCT
CGATTTCGGCTATCGCAGCGCCGGCCTGGACATCAACCAGCCGATGCTCGACCTCGCCCGACAGCGCTGCCC
CGAAGCGCACTTCAGCCGGCAGGACATGGCCGGCTTCCAGGTGGACGAGCCGCTGGACCTGATCACCTGTTT
CCTCTATTCGATCCACTACAACGCAGGGCTGGAGCGCTTGCGCGCATGCCTGGCCAGCGTGCATGGCGCACT
GGCGGATGGCGGCGTGTTCTGTTTCAACACGGTGGACAAGGGGCAGATCGACAATCGCTCGTTCGTCCGCCA
TTCCGTGGAGCATCGAGGCAGCCGCTTCACCTTCGGTTCCGGCTGGTACTACAGCGGCGAGGGCGAGCGCCA
GGCGCTGCGCCTCGGTATCGAGAAAACCACGGACGGAACGACCCAGACCTGGGAGGACGAACACCCCATGGT
CGCCCTCAGCTTCGCCGAGCTGCAGCACCTGTTGCAGACGCATTTCGAGGTGCAGGTCTTCGAACACGACTA
CGAACGGATCACGCCCTGGGCCGGCAGCTCCGGGAATGCCCTGTTCGTCTGCGTGAAGCGCTAGCCTCCGGA
TATCCTGGCGCAAACGTGACGATCAGGCTGGCACGGGCGGGGCAGCGTTTCACAGGGGGCTGCGGAGGATTC
TTCGTCGCTTTCGGCACGCTGCGTCCGACCCGCTAG

Translation:

MRRAALPPVVAPAGALPPSLQPVPQGPWGGIRQLWQRPRRGPAHRPRRRPARRVQLLPRRAPALLLALRLAA
VLVKERRQVRRLGIGRPRQPGHALPIGETEACPGRVDGLLVPDSRRLAAVRLKSARDPPAGACFFAGKARAW
GTMPRPSPPVLAAHVRHCAVHRPVPLLRPDVRRHRLPGAEPLRASPAPVVRQPGPAAPGPGLRYRPSREALP
RFRLSQRRPGHQPADARPRPTALPRSALQPAGHGRLPGGRAAGPDHLFPLFDPLQRRAGALARMPGQRAWRT
GGWRRVLFQHGGQGADRQSLVRPPFRGASRQPLHLRFRLVLQRRGRAPGAAPRYRENHGRNDPDLGGRTPHG
RPQLRRAAAPVADAFRGAGLRTRLRTDHALGRQLRECPVRLREALASGYPGANVTIRLARAGQRFTGGCGGF
FVAFGTLRPTR*

AnnotationID:6594 GeneID:6593

AnnotatorUID: danlee

Modification Date/Time: 2006-03-20 15:03:07

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

Overlaps GID3037 (PA14_09870) and GID4765 (PA14_09880).

ReferenceID:16353

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30284