ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6578

TrivialName: PA14_10510

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_10510

PAO1 Ortholog Locus:

Sequence Length: 1638

Protein Length: 545

Start: 903749

Stop: 905386

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA39559.1| (X56082) endo-glucanase [Ruminococcus flavefaciens] Identities = 85/313 (27%), Positives = 119/313 (38%), Gaps = 64/313 (20%)

Sequence:

ATGGCTGGCCACCAGCGACTCGACGAAGGAGTAGGTCAGCGTGCCGTCCTCGTTGACCGCGCGCCACATCAG
GCCCTGGGTAATGCCGTTGACCCACAGCGAGGCGATGTACAGCACGGTGCCGATGGTGGCCAGCCAGAAGTG
CGCATTGATCAGGCCGACGCTGTGCATCTTCTCGACCCCGTAGACCTTGGGAATCAGGTGGTAGAGCGAGCC
GATGGTGATCATCGCGACCCAGCCGAGGGCGCCGGCGTGGACGTGGCCGATGGTCCAGTCGGTGTAGTGGGA
GAGGGCGTTGACGGTCTTGATCGCCATCATCGGGCCTTCGAAGGTGGACATGCCGTAGAACGCCAGGGACAC
CACCAGGAAGCGCAGGATCGGGTCGTCGCGCAGCTTATGCCAGGCCCCGGAGAGGGTCATCATGCCGTTGAT
CATGCCGCCCCAGCTCGGCGCCAGGAGGATCAGCGACATCACCATGCCCAGCGACTGCGCCCAGTCCGGCAG
CGCGGTGTAGTGCAGGTGGTGCGGGCCGGCCCAGATGTACAGGGTGATCAGCGCCCAGAAGTGGACGATGGA
CAGCCGGTAGGAGTAGACCGGGCGCCCGGCTTGCTTGGGCACGAAGTAGTACATCATGCCGAGGAAGCCGGT
GGTCAGGAAGAAGCCTACGGCGTTGTGCCCGTACCACCACTGGACCATGGCATCGGTGGCGCCGGAGTACAT
CGAGTAGGACTTGAACCAGCTCACCGGCAGCGACATGTGGTTGACGATGTGCAGCATCGCGGTGGTCAGGAT
GAACGAGCCGAAGAACCAGTTGCCGACATAGATGTGCTTGACCTTGCGCTTGATCAGGGTGCCGAAGAACAC
CACCGCGTAGGCGACCCAGACGATCGCCAGCCAGATCGCGCCGGTGAACTCGATCTCGGCGTATTCCTTGGT
GGTGGTGTTGCCCAGCGGCAGGCTGACCAGCAGGATCACCGCCACCGCCTGCCAGCCCCAGAAGGTGAAGGC
GGCCAGGGTGTCGGAGAACAGTCGCACCTGGCAGGTACGCTGCACCGTGTAGTAGCTGGTGGCGAACAGCGC
GCAGCCGCCGAAGGCGAAGATCACCAGGTTGGTATGCAGCGGCCGCAGGCGGCCGAAGCTGGTCCAGGGCAG
GTCGAAGTTCATCTGGGGCCAGACCAGTTGCGAGGCGATCAGTACGCCCAACCCCATGCCGATCACGCCCCA
TACCACGGTCATGATGGCGAACTGGCGAACCACCTTGTAGTTGTAGGCAGGTTCCGTCGTTGCTTTGTTCAT
CTGTACAGTCCCGAAAGAAATGAACAGCCGGCGACCGCCGTCGAGGGGGGAGACGGGGCGCCGGCCGGAGCC
TGCAATCTAAGGGCTGGGGCGGGGGTAAAACAGCTTCAGGTCGATATGGAATTTGGGTATCAGATGGGGCGG
GGGAAGGCGTTCGTGCAGGGCGGCGGCGCATACCGGGATGGGGGACGCGAGCCGATCATGGCGGATGACCGC
GCGCGGTTATCCGCCCTACGCCGGGGTGGCTTTCCGTGTGCGGGGCGTCATCCCGCCAGCGACTGGGCGATC
CGCCCGAGTGTCTCCATCGCCTTCTCCTGCCGCGCGCTCCACGGGTGCCCGTAG

Translation:

MAGHQRLDEGVGQRAVLVDRAPHQALGNAVDPQRGDVQHGADGGQPEVRIDQADAVHLLDPVDLGNQVVERA
DGDHRDPAEGAGVDVADGPVGVVGEGVDGLDRHHRAFEGGHAVERQGHHQEAQDRVVAQLMPGPGEGHHAVD
HAAPARRQEDQRHHHAQRLRPVRQRGVVQVVRAGPDVQGDQRPEVDDGQPVGVDRAPGLLGHEVVHHAEEAG
GQEEAYGVVPVPPLDHGIGGAGVHRVGLEPAHRQRHVVDDVQHRGGQDERAEEPVADIDVLDLALDQGAEEH
HRVGDPDDRQPDRAGELDLGVFLGGGVAQRQADQQDHRHRLPAPEGEGGQGVGEQSHLAGTLHRVVAGGEQR
AAAEGEDHQVGMQRPQAAEAGPGQVEVHLGPDQLRGDQYAQPHADHAPYHGHDGELANHLVVVGRFRRCFVH
LYSPERNEQPATAVEGGDGAPAGACNLRAGAGVKQLQVDMEFGYQMGRGKAFVQGGGAYRDGGREPIMADDR
ARLSALRRGGFPCAGRHPASDWAIRPSVSIAFSCRALHGCP*

AnnotationID:6579 GeneID:6578

AnnotatorUID: diggins

Modification Date/Time: 2005-03-30 13:01:36

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12935

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30255