ViewGene

Locus Name:
GeneID:
Location:

GeneID:6577
TrivialName: PA14_10520
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_10520
PAO1 Ortholog Locus:
Sequence Length:1599
Protein Length:532
Start: 905296
Stop: 906894
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGTGCGGGGCGTCATCCCGCCAGCGACTGGGCGATCCGCCCGAGTGTCTCCATCGCCTTCTCCTGCCGCGC
GCTCCACGGGTGCCCGTAGTTGAGCCGGGCGCAATGGGCGAAGCGGCGGGTGGCGGAGAAGATCGGCCCCGG
GGCGAGGCTGATGCCCTGGGCCAGGGCCAGTTGGAACAGGCGCAGCGAGTCGACCGCCTCGGGCAACTCCAG
CCAGAGGAAGTAGCCGCCGCTGGGACGGCTGACCCGGGTCTGCTCGGGGAAGTAACGCGCCACCGCCGCGAG
CATGGCGTTCTGCTGGGTCTCCAGGGCGTAGCGCAGCTTGCGCAGGTGGCGGTCGTAGCCGCCGTGCTGGAG
ATAGTCGGCGATGGCCGCCTGGGCCGGGATCGACGCCGACAGGCTGGTCATCAGCTTCAGTCGCTCGATCTG
CTCGGCGTAGCGTCCGCCGGCCACCCAGCCGACCCGGTAGCCCGGCGCCAGGCTCTTGGAGAAGGAACTGCA
GTGCATCACCAGGCCTTCCTGGTCGTAGGCCTTGACCGGTTTCGGCGCCTGCTGGCCGAAGTACAGTTCGGC
GTACACGTCGTCCTCGATCATCGGCACCTGGTGGCGCGCCAGCAGCTCGGCGAGGGCGCGTTTCTTCTCGTC
GTCCATGCTCGCGCCCATCGGGTTCTGGAAGTTGCTCATGAACCAGCAGGCCTTGATCGGCAGGCGCTCCAG
GCTGTCGGCGAGCACTTCCAGGTCGATGCCTTCACGCGGATGCACGGGGATTTCCACCGCCTTCAGCTTCAA
CCGTTCCAGCACCTGCAGGGTGGCGTAGAACGCCGGCGCCTCGATGGCCACCAGGTCGCCGGGACGGGTGAC
CACCTGCAGGCAGAGGTTGAGTGCCTCCAGCGCGCCGTTGCTGATGACCAGTTCTTCCACCGGCAGCAGCAG
GCCGCCGACCATGTAGCGCAGGGCGATCTGCCGGCGCAGGCCATGGTTGCCCGGCGTCATGTCGGCGACCAC
CGACTGCGGGTCCATGTCGCGCACCGCGTGGGCCATCGAGCGCGCCAGGCGCGGCAGGGGAAACAGTTGCGG
ACTGGGAAACGCCGAGCCGAAGGGCACGGTGTCCGGGTCCTTGATCGAACTGAGTACGGAGAACACCAGCTC
GCTGACGTCGACCTCGGTGGCGTCGGCCTGGCGCGGGCTGATCTCCGGTTCCGGCAGCGGCCGCTGCACGTG
CTGGCAGACGAAGTAGCCGGAGCGTGCGCGGGCCATGATCAGCCCACGGCTTTCCAGCAGGTAGTAGGCCTG
GAACACGGTGGAAGCGCTGACCCCGTAGGTACGACTGGCGTGCCGTACCGAGGGCACCTTCTGCCCGGGGGC
GAGGACGCCGGTGCGGATCAGCTCGGCAATCTCGTCGGCGAATTTCTCGTAGCGCTTCATCTTGTCCTGGCC
GCTGTCCTGGCTGGCCGTGGGCACGGCCGCTGGCGCCCACTCTATGCGCGCCGGGACCGTGTTGTCATGCCT
CATCGCGGCCTCCTCAGCGCGCCGGCGAAACGAAGGTGCTGGTGCTGCCGACCGCCAGGCTCGGGTCGTCGA
TGCCGCGCAGGCTGA
Translation:
MCGASSRQRLGDPPECLHRLLLPRAPRVPVVEPGAMGEAAGGGEDRPRGEADALGQGQLEQAQRVDRLGQLQ
PEEVAAAGTADPGLLGEVTRHRREHGVLLGLQGVAQLAQVAVVAAVLEIVGDGRLGRDRRRQAGHQLQSLDL
LGVASAGHPADPVARRQALGEGTAVHHQAFLVVGLDRFRRLLAEVQFGVHVVLDHRHLVARQQLGEGAFLLV
VHARAHRVLEVAHEPAGLDRQALQAVGEHFQVDAFTRMHGDFHRLQLQPFQHLQGGVERRRLDGHQVAGTGD
HLQAEVECLQRAVADDQFFHRQQQAADHVAQGDLPAQAMVARRHVGDHRLRVHVAHRVGHRARQARQGKQLR
TGKRRAEGHGVRVLDRTEYGEHQLADVDLGGVGLARADLRFRQRPLHVLADEVAGACAGHDQPTAFQQVVGL
EHGGSADPVGTTGVPYRGHLLPGGEDAGADQLGNLVGEFLVALHLVLAAVLAGRGHGRWRPLYARRDRVVMP
HRGLLSAPAKRRCWCCRPPGSGRRCRAG*
AnnotationID:6578GeneID:6577
AnnotatorUID: diggins
Modification Date/Time: 2005-03-30 13:01:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16338
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30253
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49579How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 4048641Stop: 4047043
Length: 1599
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGTGCGGGGCGTCATCCCGCCAGCGACTGGGCGATCCGCCCGAGTGTCTCCATCGCCTTCTCCTGCCGCGC
GCTCCACGGGTGCCCGTAGTTGAGCCGGGCGCAATGGGCGAAGCGGCGGGTGGCGGAGAAGATCGGCCCCGG
GGCGAGGCTGATGCCCTGGGCCAGGGCCAGTTGGAACAGGCGCAGCGAGTCGACCGCCTCGGGCAACTCCAG
CCAGAGGAAGTAGCCGCCGCTGGGACGGCTGACCCGGGTCTGCTCGGGGAAGTAACGCGCCACCGCCGCGAG
CATGGCGTTCTGCTGGGTCTCCAGGGCGTAGCGCAGCTTGCGCAGGTGGCGGTCGTAGCCGCCGTGCTGGAG
ATAGTCGGCGATGGCCGCCTGGGCCGGGATCGACGCCGACAGGCTGGTCATCAGCTTCAGTCGCTCGATCTG
CTCGGCGTAGCGTCCGCCGGCCACCCAGCCGACCCGGTAGCCCGGCGCCAGGCTCTTGGAGAAGGAACTGCA
GTGCATCACCAGGCCTTCCTGGTCGTAGGCCTTGACCGGTTTCGGCGCCTGCTGGCCGAAGTACAGTTCGGC
GTACACGTCGTCCTCGATCATCGGCACCTGGTGGCGCGCCAGCAGCTCGGCGAGGGCGCGTTTCTTCTCGTC
GTCCATGCTCGCGCCCATCGGGTTCTGGAAGTTGCTCATGAACCAGCAGGCCTTGATCGGCAGGCGCTCCAG
GCTGTCGGCGAGCACTTCCAGGTCGATGCCTTCACGCGGATGCACGGGGATTTCCACCGCCTTCAGCTTCAA
CCGTTCCAGCACCTGCAGGGTGGCGTAGAACGCCGGCGCCTCGATGGCCACCAGGTCGCCGGGACGGGTGAC
CACCTGCAGGCAGAGGTTGAGTGCCTCCAGCGCGCCGTTGCTGATGACCAGTTCTTCCACCGGCAGCAGCAG
GCCGCCGACCATGTAGCGCAGGGCGATCTGCCGGCGCAGGCCATGGTTGCCCGGCGTCATGTCGGCGACCAC
CGACTGCGGGTCCATGTCGCGCACCGCGTGGGCCATCGAGCGCGCCAGGCGCGGCAGGGGAAACAGTTGCGG
ACTGGGAAACGCCGAGCCGAAGGGCACGGTGTCCGGGTCCTTGATCGAACTGAGTACGGAGAACACCAGCTC
GCTGACGTCGACCTCGGTGGCGTCGGCCTGGCGCGGGCTGATCTCCGGTTCCGGCAGCGGCCGCTGCACGTG
CTGGCAGACGAAGTAGCCGGAGCGTGCGCGGGCCATGATCAGCCCACGGCTTTCCAGCAGGTAGTAGGCCTG
GAACACGGTGGAAGCGCTGACCCCGTAGGTACGACTGGCGTGCCGTACCGAGGGCACCTTCTGCCCGGGGGC
GAGGACGCCGGTGCGGATCAGCTCGGCAATCTCGTCGGCGAATTTCTCGTAGCGCTTCATCTTGTCCTGGCC
GCTGTCCTGGCTGGCCGTGGGCACGGCCGCTGGCGCCCACTCTATGCGCGCCGGGACCGTGTTGTCATGCCT
CATCGCGGCCTCCTCAGCGCGCCGGCGAAACGAAGGTGCTGGTGCTGCCGACCGCCAGGCTCGGGTCGTCGA
TGCCGCGCAGGCTGA