ViewGene

Locus Name:
GeneID:
Location:

GeneID:6565
TrivialName: PA14_11040
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_11040
PAO1 Ortholog Locus:
Sequence Length:1431
Protein Length:476
Start: 954174
Stop: 955604
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCAGTTCGACGTCCTCCGCGCGGGTCGCCGGGCAGGTCAGCGCCATGTTGTGGAATGGCGTCAAGAGCAC
GCCGCGGTTGAGCAGGTAGAGGTGCAGGCAGGCCTCGACCAGGCCGTTGCGTGCGTGGTGGGCCTCGCCGCC
GTTGCGCGGGGCGTGGGTCATGAACAGGTACTCGACGCGCGCGCCGATGCGCGTCACGTGCCAGGGCAGGCG
CAGTTCCTCGAGCGTCGCGCGGACGCCCGCCTCGAGCTGCGCGGCGAGCTGGAACATATGCCGATAGGCGTC
CTCCGTCATCACTTCGGCGAAGGTCGCGCGCATCGCCGCCAGTTGCAGCGCGTTGCCGGCCAGGGTGCCGCC
AAAGCCGAAATGGTTGATCGCCTGCCCCGGTCGGAAGTGCGGCAGTACCGCCCAGATCCGCTCCGCCTGCGC
CTGGCTGCATCCCCAGACGGCGCTGGGAATGCCGCCGGCGATGCATTTGCCGAGGACGAAGAAGTCCGGCTC
GAGGCCATGCGCGCCGCTATAGCCGGCGGGACCGCAGGAGATGGTGTGGGTCTCGTCGATGATCAGCGCCAC
GTCGTGGCGGCGGGTCAGTTCGCGCAGGCCGGCGTGGAAGCCTTCGGCCGGCGGGACCATGCCGACGTTGGT
CATGAAGGGTTCGGTGAGCACCGCGGCGACGTCGCCATGGGCGAGGGCGGCCTCCAGCGCGTCGAGGTCGTT
GAACTCCACCAGGCGGGTGGTGGCGTCGTGGCGTACGCCATTGGGGTGAACGCCCGCGCGCGGAACCATGCG
CCCGGCGGCGTCGAATTCCACCTGCGATTCGTCGACGCTGCCGTGGTAGTTGCAGTTGAACACCACCACCTT
GTCACGTCCGCTGAGCATCCGGCACAGGCGCAGGACGAAACGGTTGGCGTCGGTGGCCGAGGTGGTCACCTG
CCAATAGGGCAGGCCGAAGCGCCGCGCCAGTTCGGCGCCGACCCACAGGCTGTCCTCGGTCGGCAGCATCAG
GGTCGAGCCGCGCCGCGCCTGGCGGGCGATGGCGTCGGCCACCGCCGGTTGGGCGTGGCCGAACATGGCGCC
GCTATCGCCGAGGGCGAAGTCGACGTACTGCTGGCCGTCGATGTCGGTGACGCGCGCGCCCTGGGCCTCTTT
CACCAGCAGCGGGCAGTTGCCCGGCCACTGTTGCATCCAGTGCAACGGTGCGCCGTACAGCCAGTGGCGGCG
GTTTTCCCGGTAGGCCTGGGCGGAGCGCGGATGCAGTTCGTCGAAGCGTCGCAGCTCGCGCTTGAACAGCGC
TTCGACGCGGGCCAGGTCGAGGCCGAAGGTGGTGTCCATGGGCGTCCTCACAGGTCGTGGCGGGTCTGGTTG
AGCACCTGGGCCAGGGCGCCGACCGGGAAGTTAACCGGGGTGGCGAAGTCGTCGTCCTGGTAG
Translation:
MQFDVLRAGRRAGQRHVVEWRQEHAAVEQVEVQAGLDQAVACVVGLAAVARGVGHEQVLDARADARHVPGQA
QFLERRADARLELRGELEHMPIGVLRHHFGEGRAHRRQLQRVAGQGAAKAEMVDRLPRSEVRQYRPDPLRLR
LAASPDGAGNAAGDAFAEDEEVRLEAMRAAIAGGTAGDGVGLVDDQRHVVAAGQFAQAGVEAFGRRDHADVG
HEGFGEHRGDVAMGEGGLQRVEVVELHQAGGGVVAYAIGVNARARNHAPGGVEFHLRFVDAAVVVAVEHHHL
VTSAEHPAQAQDETVGVGGRGGHLPIGQAEAPRQFGADPQAVLGRQHQGRAAPRLAGDGVGHRRLGVAEHGA
AIAEGEVDVLLAVDVGDARALGLFHQQRAVARPLLHPVQRCAVQPVAAVFPVGLGGARMQFVEASQLALEQR
FDAGQVEAEGGVHGRPHRSWRVWLSTWARAPTGKLTGVAKSSSW*
AnnotationID:6566GeneID:6565
AnnotatorUID: diggins
Modification Date/Time: 2005-03-30 08:08:47
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16331
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30230
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49567How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3999763Stop: 3998333
Length: 1431
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCAGTTCGACGTCCTCCGCGCGGGTCGCCGGGCAGGTCAGCGCCATGTTGTGGAATGGCGTCAAGAGCAC
GCCGCGGTTGAGCAGGTAGAGGTGCAGGCAGGCCTCGACCAGGCCGTTGCGTGCGTGGTGGGCCTCGCCGCC
GTTGCGCGGGGCGTGGGTCATGAACAGGTACTCGACGCGCGCGCCGATGCGCGTCACGTGCCAGGGCAGGCG
CAGTTCCTCGAGCGTCGCGCGGACGCCCGCCTCGAGCTGCGCGGCGAGCTGGAACATATGCCGATAGGCGTC
CTCCGTCATCACTTCGGCGAAGGTCGCGCGCATCGCCGCCAGTTGCAGCGCGTTGCCGGCCAGGGTGCCGCC
AAAGCCGAAATGGTTGATCGCCTGCCCCGGTCGGAAGTGCGGCAGTACCGCCCAGATCCGCTCCGCCTGCGC
CTGGCTGCATCCCCAGACGGCGCTGGGAATGCCGCCGGCGATGCATTTGCCGAGGACGAAGAAGTCCGGCTC
GAGGCCATGCGCGCCGCTATAGCCGGCGGGACCGCAGGAGATGGTGTGGGTCTCGTCGATGATCAGCGCCAC
GTCGTGGCGGCGGGTCAGTTCGCGCAGGCCGGCGTGGAAGCCTTCGGCCGGCGGGACCATGCCGACGTTGGT
CATGAAGGGTTCGGTGAGCACCGCGGCGACGTCGCCATGGGCGAGGGCGGCCTCCAGCGCGTCGAGGTCGTT
GAACTCCACCAGGCGGGTGGTGGCGTCGTGGCGTACGCCATTGGGGTGAACGCCCGCGCGCGGAACCATGCG
CCCGGCGGCGTCGAATTCCACCTGCGATTCGTCGACGCTGCCGTGGTAGTTGCAGTTGAACACCACCACCTT
GTCACGTCCGCTGAGCATCCGGCACAGGCGCAGGACGAAACGGTTGGCGTCGGTGGCCGAGGTGGTCACCTG
CCAATAGGGCAGGCCGAAGCGCCGCGCCAGTTCGGCGCCGACCCACAGGCTGTCCTCGGTCGGCAGCATCAG
GGTCGAGCCGCGCCGCGCCTGGCGGGCGATGGCGTCGGCCACCGCCGGTTGGGCGTGGCCGAACATGGCGCC
GCTATCGCCGAGGGCGAAGTCGACGTACTGCTGGCCGTCGATGTCGGTGACGCGCGCGCCCTGGGCCTCTTT
CACCAGCAGCGGGCAGTTGCCCGGCCACTGTTGCATCCAGTGCAACGGTGCGCCGTACAGCCAGTGGCGGCG
GTTTTCCCGGTAGGCCTGGGCGGAGCGCGGATGCAGTTCGTCGAAGCGTCGCAGCTCGCGCTTGAACAGCGC
TTCGACGCGGGCCAGGTCGAGGCCGAAGGTGGTGTCCATGGGCGTCCTCACAGGTCGTGGCGGGTCTGGTTG
AGCACCTGGGCCAGGGCGCCGACCGGGAAGTTAACCGGGGTGGCGAAGTCGTCGTCCTGGTAG